My Annotations
| Status | Page | Date/Time | GO Term (Aspect) | Reference | Evidence | Notes | Links |
|---|
| acceptable | HAEI8:MURA | 2013-03-26 11:18:57 CDT | GO:0008760 UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity (F) | PMID:23462005 | ECO:0000315 mutant phenotype evidence used in manual assertion | Figure 3 demonstrates the inhibitory activities on MurA and then determines the residual activity.
Figure 5 demonstrates the inhibitory actions of sulfhydryl group dependent activity on the mutant phenotype.
| challenge |
| updatedbyinstructor | RHILE:Q20DQ4 | 2013-04-09 12:24:21 CDT | GO:0008378 galactosyltransferase activity (F) | PMID:22110131 | ECO:0000314 direct assay evidence used in manual assertion | Figure 3 demonstrates the rgtA activity through its ability to be a galA donor and viewing the total lipid extracts from strains with the enzyme vs. strains without the enzyme
| challenge |
| acceptable | SALTY:Q9XDN0 | 2013-04-09 12:36:43 CDT | GO:0004022 alcohol dehydrogenase (NAD) activity (F) | PMID:23077559 | ECO:0000315 mutant phenotype evidence used in manual assertion | Figure 3 demonstrates the ability for the mutant to grow on media with minimal or saturated B12.
Figure 6 shows that PduQ regenerates NAD+ for the PduP reaction in purified Pdu MCPs by demonstrating the concentration of propionyl-CoA in comparison with a mutant phenotype.
| challenge |
| updatedbyinstructor | ARTAU:Q6SJY7 | 2013-04-10 12:31:41 CDT | GO:0004040 amidase activity (F) | PMID:16885454 | ECO:0000314 direct assay evidence used in manual assertion | Figure 5 demonstrates the activity of Zn(II) and Co(II) trzN with selected s-triazines as substrates.
Figure 4 shows the effect of metal addition on ametryn hydrolysis activity of native TrzN purified from recombinant cells grown on 500M zinc and metal-depleted TrzN.
| challenge |
| updatedbyinstructor | LEPIR:C0J1Q3 | 2013-04-10 12:55:48 CDT | GO:0045916 negative regulation of complement activation (P) | PMID:22911815 | ECO:0000314 direct assay evidence used in manual assertion | Figure 3 shows the inhibition of both the alternative and classical pathways of complement activation through the inhibition of complement-mediated hemolysis of rabbit erthrocytes.
| challenge |
acceptable:2
unacceptable:0
requires_changes:0
flagged:0
Annotations challenged by Priesko4
| Status | Author,Group | Page | GO Term (Aspect) | Reference | Evidence | Links | Page history |
|---|
| updatedbyinstructor | Priesko4,
Team ttKtt | ARTAU:Q6SJY7 | GO:0004040 - amidase activity (F) | PMID:16885454 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 2
fixed by Priesko4 |
| updatedbyinstructor | Reddenc1,
Team Better Than Hot Pocket | XANC5:Q3BUB5 | GO:0043709 - cell adhesion involved in single-species biofilm formation (P) | PMID:21995764 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 6
|
| updatedbyinstructor | Pallasbr,
Team KEGGstands at PubMed | HUMAN:E2F1 | GO:0045893 - positive regulation of DNA-templated transcription (P) | PMID:22476863 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 3
|
| updatedbyinstructor | Zdebstep,
Team Hot Pockets | ECOLX:E2QE90 | GO:0002949 - tRNA threonylcarbamoyladenosine modification (P) | PMID:21183954 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 4
fixed by Zdebstep |
| updatedbyinstructor | Acoppola,
Team CFP | HUMAN:NLGN2 | GO:0032024 - positive regulation of insulin secretion (P) | PMID:22528485 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 1
|
| updatedbyinstructor | Singhpr4,
Team The Monstars | CLOPH:NIGP | GO:0004645 - 1,4-alpha-oligoglucan phosphorylase activity (F) | PMID:21808968 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 2
fixed by Priesko4 |
| requireschanges | Amanda.karpa,
Team Cytoskeleton | MOUSE:ITSN1 | GO:0043524 - negative regulation of neuron apoptotic process (P) | PMID:23054079 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 4
|
| unacceptable | Elkington,
Team Old Worm | CAEEL:Q9GZG4 | GO:1900369 - negative regulation of post-transcriptional gene silencing by regulatory ncRNA (Figure 4A) | PMID:17110334 | IMP: Inferred from Mutant Phenotype | challenge | C: 3
|
| updatedbyinstructor | Mill2034,
Team Its Miller Time | ECOLI:CPXR | GO:0045893 - positive regulation of DNA-templated transcription (P) | PMID:15743952 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 3
|
| updatedbyinstructor | Mill2034,
Team Its Miller Time | ARATH:AB1D | GO:0016042 - lipid catabolic process (P) | PMID:12065405 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 4
|
| updatedbyinstructor | Pallasbr,
Team KEGGstands at PubMed | MOUSE:FOSL2 | GO:0045893 - positive regulation of DNA-templated transcription (P) | PMID:22585681 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 2
|
| updatedbyinstructor | Vthompsonui,
Team Buster McThunderstick | MYCTU:PAT | GO:0016746 - acyltransferase activity (F) | PMID:21627103 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 1
fixed by Priesko4 |
| requireschanges | Vthompsonui,
Team Buster McThunderstick | MYCTU:ACSA | GO:0006476 - protein deacetylation (P) | PMID:21627103 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 1
|
| unacceptable | Optimus Prime,
Team Cybertron | ARATH:DAPA2 | GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity (F) | PMID:22792278 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 2
|
| updatedbyinstructor | Brianna.diehl,
Team Plasma Membrane | MOUSE:NDRG1 | GO:0008285 - negative regulation of cell population proliferation (P) | PMID:23555679 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 4
|
| updatedbyinstructor | Mill1856,
Team Its Miller Time | NOSS1:Q8Z0A3 | GO:0030611 - arsenate reductase activity (F) | PMID:23086594 | ECO:0000316 genetic interaction evidence used in manual assertion | challenge | C: 2
|
3 annotations fixed by Priesko4
What do the icons mean in the status column?
