User:Mill1856

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
acceptable	GEOSL:Q74D23	2013-04-10 23:38:02 CDT	GO:0009297 pilus assembly (P)	PMID:15973408	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2 shows that pilA deficient mutants are unable to produce pili compared to the wild-type, and that complementation of the mutant strain with a functional copy of pilA restores function.	challenge
updatedbyinstructor	NOSS1:Q8Z0A3	2013-04-12 13:44:59 CDT	GO:0030611 arsenate reductase activity (F)	PMID:23086594	ECO:0000316 genetic interaction evidence used in manual assertion	Figure 6 shows a complementation assay of arsenate reductase activity in ΔarsC E. coli WC3110. When all0195, an arsenate reductase from Anabaena sp. PCC7120, is transformed into E. coli that has its arsenate reducatase gene (arsC) deleted, it regains function and it able to perform similar to the wild-type strain.	challenge
updatedbyinstructor	PSEAE:FUR	2013-04-14 12:56:39 CDT	GO:0019290 siderophore biosynthetic process (P)	PMID:8478325	ECO:0000315 mutant phenotype evidence used in manual assertion	Table 3 shows that the fur mutant constitutively produces pyoverdin. When the mutant is complemented with the wild-type gene it no longer constitutively produces pyoverdin.	challenge
acceptable	ALLVD:DSRE	2013-04-14 14:39:53 CDT	GO:0019417 sulfur oxidation (P)	PMID:18952098	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2 shows that dsrE mutant is unable to oxidize sulfur to sulfate. A complementation with the wild-type dsrE gene restores the ability of A. vinosum to oxidize sulfur to sulfate.	challenge
updatedbyinstructor	CHLTE:Q8KAB9	2013-04-14 14:54:29 CDT	GO:0019418 sulfide oxidation (P)	PMID:21233162	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4 shows that the dsrM mutant is unable to oxidize sulfur globules to sulfate like the wild-type. When a complementation is done with the wild-type dsrM gene, ability to oxidize sulfur globules to sulfate is restored.	challenge
acceptable	GEOSL:Q747G2	2013-04-14 17:12:43 CDT	GO:0033215 iron assimilation by reduction and transport (P)	PMID:16000176	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4 shows that the OmpJ mutant is unable to reduce Fe(III) like the wild-type.	challenge
unacceptable	FRATU:K0E856	2013-04-14 17:16:25 CDT	GO:0009297 pilus assembly (Figure 3 shows that pilF mutants do not produce pili like the wild-type. When complemented with a plasmid containing the functional pilF gene, the mutant regains the ability to produce pili.)	PMID:18426883	IMP: Inferred from Mutant Phenotype		challenge

acceptable:3
unacceptable:1
requires_changes:0
flagged:0

Annotations challenged by Mill1856

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
unacceptable	Romero.alan, Team BTHO PubMed!	PSEPK:TOLB	GO:0051301 - cell division (P)	PMID:10940016	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 1
updatedbyinstructor	Mkelly, Team CFP	DANRE:Q20CG4	GO:0036135 - Schwann cell migration (P)	PMID:21965611	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 2 fixed by Mill1856
updatedbyinstructor	Vthompsonui, Team Buster McThunderstick	MOUSE:UPP1	GO:0006218 - uridine catabolic process (P)	PMID:23355744	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 2 fixed by Mill1856
updatedbyinstructor	Mill1856, Team Its Miller Time	CHLTE:Q8KAB9	GO:0019418 - sulfide oxidation (P)	PMID:21233162	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 2

2 annotations fixed by Mill1856

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