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Category:Team CFP

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StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptableDANRE:Q20CG4Mkelly, Team CFP2013-04-14 17:36:10 CDTGO:0060347 heart trabecula formation (P)PMID:21246662ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 5: The authors used AG1748 to block ErbB4/neuregulin interaction in zebrafish embryos, thereby phenocopying loss of neuregulin signaling (control: DMSO injection).

challenge
updatedbyinstructorDANRE:Q20CG4Mkelly, Team CFP2013-04-14 17:30:30 CDTGO:0036135 Schwann cell migration (P)PMID:21965611ECO:0000315 mutant phenotype evidence used in manual assertion

Perlin et al. used anti-sense MOs to knockdown neuregulin expression, and Figure 1 shows that in zebrafish morphants, there was a reduction of Schwann cells occupying the PLLn.

challenge
acceptableCHICK:Q4PLA5Mkelly, Team CFP2013-03-31 16:21:16 CDTGO:0051491 positive regulation of filopodium assembly (P)PMID:16912080ECO:0000315 mutant phenotype evidence used in manual assertion

Expression of dominant negative ErbB4 mutant inhibited extension of leading process on rhombic lip (Figure 7)

challenge
acceptableHUMAN:DRD2Christinaliu, Team CFP2013-03-28 22:13:50 CDTGO:1900168 positive regulation of glial cell line-derived neurotrophic factor secretion (P)PMID:23373701ECO:0000314 direct assay evidence used in manual assertion

Data from a chromatin immunoprecipitation assay, tehy identified a direct association of Zif268 with the GDNF promoter, and Figure 1 shows that Dopamine D2 receptor (D2R) activation increases glial cell line–derived neurotrophic factor (GDNF) mRNA and protein levels

challenge
acceptableXENLA:Q153D9Mkelly, Team CFP2013-03-28 21:51:46 CDTGO:0060031 mediolateral intercalation (P)PMID:17134691ECO:0000315 mutant phenotype evidence used in manual assertion

Generated mutant ErbB4 receptors (truncated receptors)

performed in vitro explant assay to understand if ErbB signaling is involved in regulation of head mesoderm migration (Figure 6)

challenge
requireschangesMOUSE:VIMEEstherchung, Team CFP2013-03-28 21:27:41 CDTGO:0010762 regulation of fibroblast migration (P)PMID:21346197ECO:0000315 mutant phenotype evidence used in manual assertion

Vimentin involvement in lamellipodia formation was inferred from silencing experiments.

challenge
updatedbyinstructorCHICK:NDF1Luispimentelbennaton, Team CFP2013-03-28 21:23:38 CDTGO:0042479 positive regulation of eye photoreceptor cell development (P)PMID:9740021ECO:0000314 direct assay evidence used in manual assertion

"Retroviral-driven misexpression of neuroD in monolayer cultures of retinal pigment epithelium yielded de novo production of photoreceptor cells with no other types of retinal neurons detected. We propose that neuroD is important for photoreceptor cell production in the vertebrate retina."

challenge
acceptableHUMAN:TOIP2Christinaliu, Team CFP2013-03-28 21:14:09 CDTGO:0090435 protein localization to nuclear envelope (P)PMID:19339278ECO:0000314 direct assay evidence used in manual assertion

Figure 1: LULL1 promotes relocalization of TorA to the NE

They studied the subcellular localization of TorA with mGFP fused to its C-terminus in transfected U2OS cells
challenge
acceptableCHICK:Q4PLA5Mkelly, Team CFP2013-03-28 21:09:16 CDTGO:0010592 positive regulation of lamellipodium assembly (P)PMID:16912080ECO:0000315 mutant phenotype evidence used in manual assertion

Expression of dominant negative ErbB4 mutant inhibited extension of leading process on rhombic lip (Figure 7)

challenge
updatedbyinstructorCAEEL:NLGN1Acoppola, Team CFP2013-03-28 20:54:29 CDTGO:0046929 negative regulation of neurotransmitter secretion (P)PMID:22859820ECO:0000315 mutant phenotype evidence used in manual assertion

See figure 1.

challenge
acceptableHUMAN:NLGN1Acoppola, Team CFP2013-03-28 20:40:36 CDTGO:0031175 neuron projection development (P)PMID:22750515ECO:0000314 direct assay evidence used in manual assertion

"The ability of NLGN1 to induce neurite outgrowth was

evaluated by incubating the neurons with increasing concentrations of recombinant NLGN1." (Page 4177) This was followed by fluorescence staining.

challenge
updatedbyinstructorHUMAN:NLGN2Acoppola, Team CFP2013-03-28 20:29:58 CDTGO:0032024 positive regulation of insulin secretion (P)PMID:22528485ECO:0000315 mutant phenotype evidence used in manual assertion

Figure S4: Analysis of insulin granule docking in pancreatic islets from NL-2 knockout mice.

challenge
updatedbyinstructorDROME:Q9NGK5Acoppola, Team CFP2013-03-28 20:23:28 CDTGO:0008345 larval locomotory behavior (P)PMID:21228178ECO:0000315 mutant phenotype evidence used in manual assertion

Fig Supplementary 3 (or Fig 9).

challenge
updatedbyinstructorDROME:Q9NGK5Acoppola, Team CFP2013-03-28 20:17:36 CDTGO:0050805 positive regulation of synaptic transmission (P)PMID:21228178ECO:0000315 mutant phenotype evidence used in manual assertion

Inferred from electrophysiology experiments. See figure 3.

challenge
updatedbyinstructorDROME:Q9NGK5Acoppola, Team CFP2013-03-28 20:16:12 CDTGO:0031594 neuromuscular junction (C)PMID:21228178ECO:0000314 direct assay evidence used in manual assertion

Figure 1: Increased concentration of protein at the NMJs.

challenge

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Pages in category "Team CFP"

The following 6 pages are in this category, out of 6 total.


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