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ARATH:DAPA2
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | DHDPS2 | |
| Protein Name(s) | 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic
HTPA synthase 2 | |
| External Links | ||
| UniProt | Q9FVC8 | |
| EMBL | AF200325 AC002387 CP002685 BT004823 | |
| PIR | E84890 | |
| RefSeq | NP_182068.1 | |
| UniGene | At.12311 | |
| PDB | 4DPP 4DPQ | |
| PDBsum | 4DPP 4DPQ | |
| ProteinModelPortal | Q9FVC8 | |
| SMR | Q9FVC8 | |
| BioGrid | 4488 | |
| STRING | 3702.AT2G45440.1-P | |
| PaxDb | Q9FVC8 | |
| PRIDE | Q9FVC8 | |
| EnsemblPlants | AT2G45440.1 | |
| GeneID | 819152 | |
| KEGG | ath:AT2G45440 | |
| TAIR | AT2G45440 | |
| eggNOG | COG0329 | |
| HOGENOM | HOG000173604 | |
| InParanoid | Q9FVC8 | |
| KO | K01714 | |
| OMA | NVIPQEF | |
| PhylomeDB | Q9FVC8 | |
| BioCyc | ARA:AT2G45440-MONOMER | |
| Reactome | REACT_225978 | |
| UniPathway | UPA00034 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q9FVC8 | |
| Genevestigator | Q9FVC8 | |
| GO | GO:0009507 GO:0008840 GO:0019877 GO:0009089 | |
| Gene3D | 3.20.20.70 | |
| HAMAP | MF_00418 | |
| InterPro | IPR013785 IPR005263 IPR002220 IPR020625 IPR020624 | |
| PANTHER | PTHR12128 | |
| Pfam | PF00701 | |
| PRINTS | PR00146 | |
| TIGRFAMs | TIGR00674 | |
| PROSITE | PS00665 PS00666 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0008840 |
4-hydroxy-tetrahydrodipicolinate synthase |
ECO:0000314 |
F |
Figure S2 |
complete | |||||
|
enables |
GO:0008840 |
4-hydroxy-tetrahydrodipicolinate synthase |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008840 |
4-hydroxy-tetrahydrodipicolinate synthase |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
| GO:0008840 |
4-hydroxy-tetrahydrodipicolinate synthase |
ECO:0000314 |
F |
Fig S2 |
complete | |||||
|
enables |
GO:0008840 |
4-hydroxy-tetrahydrodipicolinate synthase |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009089 |
lysine biosynthetic process via diaminopimelate |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008840 |
4-hydroxy-tetrahydrodipicolinate synthase |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009085 |
lysine biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008652 |
cellular amino acid biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019877 |
diaminopimelate biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009536 |
plastid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009089 |
lysine biosynthetic process via diaminopimelate |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00034 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Griffin, MD et al. (2012) Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana. PLoS ONE 7 e40318 PubMed GONUTS page
- ↑ Zybailov, B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS ONE 3 e1994 PubMed GONUTS page
- ↑ Sarrobert, C et al. (2000) Identification of an Arabidopsis thaliana mutant accumulating threonine resulting from mutation in a new dihydrodipicolinate synthase gene. Plant J. 24 357-67 PubMed GONUTS page
