My Annotations
| Status | Page | Date/Time | GO Term (Aspect) | Reference | Evidence | Notes | Links |
|---|
| acceptable | ECOLI:PURU | 2013-03-29 01:56:31 CDT | GO:0006164 purine nucleotide biosynthetic process (P) | PMID:8226647 | ECO:0000315 mutant phenotype evidence used in manual assertion | Table 2. Mutants of the purU gene, along with the wild-type strains of E.coli were grown on medium containing various amino acids. Mutants required purine or formate supplementation for growth indicating role of purU in de novo purine nucleotide biosynthesis.
| challenge |
| updatedbyinstructor | ROSHC:Q5I6B5 | 2013-04-08 09:15:21 CDT | GO:0004026 alcohol O-acetyltransferase activity (F) | PMID:12692346 | ECO:0000314 direct assay evidence used in manual assertion | Figure 4: Shows that the RhAAT1 gene product catalyzed the production of geranyl acetate from gerniol and aceyl-CoA and that this was dependent on the presence of the RhAAT1 gene product (enzyme).
| challenge |
| updatedbyinstructor | MAIZE:BX6 | 2013-04-08 09:31:25 CDT | GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (F) | PMID:12620350 | ECO:0000314 direct assay evidence used in manual assertion | Figure 2: Shows that the inhibition of 2-oxoglutarate-dependent dioxygenases significantly decreases the production of DIMBOA
| challenge |
| acceptable | BACSU:GLK | 2013-04-08 13:24:46 CDT | GO:0004340 glucokinase activity (F) | PMID:9620975 | ECO:0000315 mutant phenotype evidence used in manual assertion | Table 2: Shows that a mutant strain MD186 (affecting the glcK gene) has complete loss of glucose kinase activity
| challenge |
| updatedbyinstructor | RHISY:A7BJ35 | 2013-04-09 19:24:44 CDT | GO:0016871 cycloartenol synthase activity (F) | PMID:17617700 | ECO:0000314 direct assay evidence used in manual assertion | Figure 2: Shows that when the RsCAS gene was introduced into yeast, cycloartenols were produced
| challenge |
| requireschanges | VANPL:Q6Q796 | 2013-04-11 14:36:10 CDT | GO:0047763 caffeate O-methyltransferase activity (F) | PMID:15118832 | ECO:0000021 physical interaction evidence | Table 1: Shows that culture crude protein extracts demonstrated caffeic acid O-methyltransferase activity.
| challenge |
| acceptable | 9SPHN:G2IMC6 | 2013-04-11 18:52:12 CDT | GO:0050608 vanillin dehydrogenase activity (F) | PMID:17928721 | ECO:0000315 mutant phenotype evidence used in manual assertion | Figure 4B: Shows that ligV-inactivation mutant (DLV) did not have significant growth on vanillin, yet the wild-type strain SYK-6 did have significant growth on vanillin
| challenge |
| updatedbyinstructor | PSEUH:VDH | 2013-04-14 11:07:57 CDT | GO:0050608 vanillin dehydrogenase activity (F) | PMID:9098058 | ECO:0000314 direct assay evidence used in manual assertion | Figure 10: Shows that the recombinant E.coli XL1-Blue strains with vdh gene converted vanillin to vanillic acid.
| challenge |
acceptable:3
unacceptable:0
requires_changes:1
flagged:0
Annotations challenged by Schmi409
| Status | Author,Group | Page | GO Term (Aspect) | Reference | Evidence | Links | Page history |
|---|
| updatedbyinstructor | Oekshyyan,
Team Pancakes at Night | MOUSE:IGF2 | GO:0060720 - spongiotrophoblast cell proliferation (P) | PMID:22562201 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 2
|
| updatedbyinstructor | Ratiujer,
Team Gene Simmons 2013 | 9BACL:I0BWH5 | GO:0044406 - adhesion of symbiont to host (P) | PMID:22615573 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 3
|
| requireschanges | John Svoboda,
Team MSUM 2013 | DROME:Q9VMH3 | GO:0007399 - nervous system development (P) | PMID:22016536 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 2
|
| updatedbyinstructor | Kathrynmartin,
Team M Squared | HUMAN:ATG7 | GO:0051607 - defense response to virus (P) | PMID:23290079 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 2
|
| updatedbyinstructor | Pallasbr,
Team KEGGstands at PubMed | MOUSE:FOSL2 | GO:0045893 - positive regulation of DNA-templated transcription (P) | PMID:22585681 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 2
|
| updatedbyinstructor | Mill2034,
Team Its Miller Time | ARATH:AB1D | GO:0016042 - lipid catabolic process (P) | PMID:12065405 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 4
|
| updatedbyinstructor | Sbutler,
Team Thundercats Ho! | HUMAN:KSYK | GO:0045579 - positive regulation of B cell differentiation (P) | PMID:18369315 | ECO:0000315 mutant phenotype evidence used in manual assertion | challenge | C: 5
|
| updatedbyinstructor | Detomas1,
Team Best in the NIT | ARATH:AMY3 | GO:0004556 - alpha-amylase activity (F) | PMID:23019330 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 5
|
| requireschanges | Adeaton,
Team Jaberwocky | MOUSE:PIWL2 | GO:0043971 - obsolete histone H3-K18 acetylation (P) | PMID:22110608 | ECO:0000314 direct assay evidence used in manual assertion | challenge | C: 1
|
0 annotations fixed by Schmi409
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