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User:Lperilloux

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CACAO Spring 2015

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
requireschangesMOUSE:UCHL12015-02-10 10:53:28 CSTGO:0042985 negative regulation of amyloid precursor protein biosynthetic process (P)PMID:25466238ECO:0000314 direct assay evidence used in manual assertion

Figure 2 shows UCHL 1 reduces the level of mature APP protein

challenge
requireschangesMOUSE:UCHL12015-02-10 10:53:28 CSTGO:0042984 regulation of amyloid precursor protein biosynthetic process (P)PMID:25466238ECO:0000314 direct assay evidence used in manual assertion

Figure 1 shows UCHL 1 regulates APP processing

challenge
requireschangesHUMAN:MTOR2015-02-10 11:00:14 CSTGO:1902949 positive regulation of tau-protein kinase activity (P)PMID:23585566ECO:0000314 direct assay evidence used in manual assertion

Figure 2 shows mTor directly phosphorylates tau protein

challenge
unacceptableHUMAN:MTOR2015-02-10 11:00:15 CSTGO:1903032 negative regulation of microtubule plus-end binding (P)PMID:23585566ECO:0000314 direct assay evidence used in manual assertion

Figure 7 shows mTor affects microtubule binding ability

challenge
requireschangesHUMAN:MTOR2015-02-10 11:00:15 CSTGO:0034109 homotypic cell-cell adhesion (P)PMID:23585566ECO:0000314 direct assay evidence used in manual assertion

Figure 6 shows mTor affects tau aggregation

challenge
requireschangesDROME:Q7KTX72015-02-10 11:14:19 CSTGO:0044743 intracellular protein transmembrane import (P)PMID:20194754ECO:0000316 genetic interaction evidence used in manual assertion

Figure 2 shows PINK1 is required for Parkin translocation

challenge
correctedthroughchallengesDROME:Q7KTX72015-02-10 11:14:19 CSTGO:0031398 positive regulation of protein ubiquitination (P)PMID:20194754ECO:0000314 direct assay evidence used in manual assertion

Figure 4 shows parkin overexpression can cause mfn ubiquitination in the absense of PINK1

challenge
unacceptableDROME:Q7KTX72015-02-10 11:14:19 CSTGO:0090141 positive regulation of mitochondrial fission (P)PMID:20194754ECO:0000316 genetic interaction evidence used in manual assertion

Figure 1 shows Parkin and PINK1 activity promotes mitochondrial fission

challenge
unacceptableDROME:Q7KTX72015-02-10 11:14:20 CSTGO:0010637 negative regulation of mitochondrial fusion (P)PMID:20194754ECO:0000316 genetic interaction evidence used in manual assertion

Figure 1 shows Parkin and PINK1 activity inhibits mitochondrial fusion

challenge

acceptable:0
unacceptable:3
requires_changes:5
flagged:0

Annotations challenged by Lperilloux

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
unacceptableAsingh,
Team Designated Drinkers
LACCA:K0N2B5GO:0051117 - ATPase binding (F)PMID:25658360ECO:0000314 direct assay evidence used in manual assertionchallengeC: 3
correctedthroughchallengesJderrickson,
Team Bio Bois
YEAST:ESS1GO:0030052 - obsolete parvulin (F)PMID:24468661ECO:0000314 direct assay evidence used in manual assertionchallengeC: 3

fixed by Min.lorna
requireschangesJderrickson,
Team Bio Bois
ECO27:ATPEGO:0045269 - obsolete proton-transporting ATP synthase, central stalk (C)PMID:25603139ECO:0000314 direct assay evidence used in manual assertionchallengeC: 3
unacceptableJderrickson,
Team Bio Bois
BOVIN:Q547S4GO:0032023 - trypsinogen activation (P)PMID:25637872ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2
unacceptableJderrickson,
Team Bio Bois
HUMAN:RENIGO:0004195 - obsolete renin activity (F)PMID:25635129ECO:0000314 direct assay evidence used in manual assertionchallengeC: 3
unacceptableJderrickson,
Team Bio Bois
HUMAN:PEPA3GO:0004194 - obsolete pepsin A activity (F)PMID:25633964ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2
unacceptableJderrickson,
Team Bio Bois
HUMAN:CO3GO:0018103 - protein C-linked glycosylation (P)PMID:25651845ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
requireschangesJderrickson,
Team Bio Bois
HUMAN:ELNEGO:0035579 - specific granule membrane (C)PMID:25652853ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
correctedthroughchallengesJderrickson,
Team Bio Bois
HUMAN:MASP1GO:0008236 - serine-type peptidase activity (F)PMID:25617734ECO:0000314 direct assay evidence used in manual assertionchallengeC: 6

fixed by Brcalk
correctedthroughchallengesBbourgoyne,
Team Bio Bois
HUMAN:PERTGO:0004447 - iodide peroxidase activity (F)PMID:25595679ECO:0000314 direct assay evidence used in manual assertionchallengeC: 4

fixed by Min.lorna
unacceptableBbourgoyne,
Team Bio Bois
MOUSE:CAPONGO:0004517 - nitric-oxide synthase activity (F)PMID:25621792ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2
unacceptableBbourgoyne,
Team Bio Bois
HUMAN:TYROGO:0050371 - tyrosine phenol-lyase activity (F)PMID:25654191ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
requireschangesLhicks,
Team Ubiquitous Mafia
HUMAN:TOPKGO:0043433 - negative regulation of DNA-binding transcription factor activity (P)PMID:25575812ECO:0000314 direct assay evidence used in manual assertionchallengeC: 4
unacceptableSedmondson,
Team Designated Drinkers
PIG:STF1GO:0003677 - DNA binding (F)PMID:25604140ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2
correctedthroughchallengesKsenagbe,
Team Mic Drop
HUMAN:ABCE1GO:0008428 - ribonuclease inhibitor activity (F)PMID:25659154ECO:0000314 direct assay evidence used in manual assertionchallengeC: 3

fixed by Brcalk
unacceptableMrogers,
Team Dos Juanitas
HUMAN:MFGMGO:0031012 - extracellular matrix (C)PMID:25659147ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

0 annotations fixed by Lperilloux

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