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MOUSE:PO5F1
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Pou5f1 (synonyms: Oct-3, Oct-4, Otf-3, Otf3) | |
Protein Name(s) | POU domain, class 5, transcription factor 1
NF-A3 Octamer-binding protein 3 Oct-3 Octamer-binding protein 4 Oct-4 Octamer-binding transcription factor 3 OTF-3 | |
External Links | ||
UniProt | P20263 | |
EMBL | M34381 X52437 S58426 S58422 S58423 S58424 S58425 BC068268 | |
CCDS | CCDS37600.1 | |
PIR | A34672 S17313 | |
RefSeq | NP_038661.2 | |
UniGene | Mm.17031 | |
PDB | 1OCP 3L1P | |
PDBsum | 1OCP 3L1P | |
ProteinModelPortal | P20263 | |
SMR | P20263 | |
BioGrid | 202313 | |
DIP | DIP-29931N | |
IntAct | P20263 | |
STRING | 10090.ENSMUSP00000025271 | |
PhosphoSite | P20263 | |
PRIDE | P20263 | |
Ensembl | ENSMUST00000025271 | |
GeneID | 18999 | |
KEGG | mmu:18999 | |
UCSC | uc008chu.2 | |
CTD | 5460 | |
MGI | MGI:101893 | |
eggNOG | NOG329627 | |
GeneTree | ENSGT00760000118935 | |
HOGENOM | HOG000089941 | |
HOVERGEN | HBG057998 | |
InParanoid | P20263 | |
KO | K09367 | |
OMA | LENMFLQ | |
OrthoDB | EOG7DJSMG | |
PhylomeDB | P20263 | |
TreeFam | TF316413 | |
Reactome | REACT_216222 REACT_220962 | |
EvolutionaryTrace | P20263 | |
NextBio | 295410 | |
PRO | PR:P20263 | |
Proteomes | UP000000589 | |
Bgee | P20263 | |
CleanEx | MM_POU5F1 | |
ExpressionAtlas | P20263 | |
Genevestigator | P20263 | |
GO | GO:0005737 GO:0044798 GO:0005730 GO:0005654 GO:0005634 GO:0005667 GO:0017053 GO:0003682 GO:0003677 GO:0046982 GO:0000978 GO:0001077 GO:0001105 GO:0043565 GO:0000981 GO:0003700 GO:0003714 GO:0008134 GO:0044212 GO:0031625 GO:0001824 GO:0045165 GO:0001712 GO:0001711 GO:0001714 GO:0030718 GO:0001710 GO:0042789 GO:0045955 GO:0045596 GO:0051898 GO:0000122 GO:0045892 GO:0051897 GO:0045944 GO:0045893 GO:0009786 GO:0006355 GO:0034097 GO:0010033 GO:0032526 GO:0048863 GO:0019827 GO:0006366 GO:0001829 | |
Gene3D | 1.10.10.60 1.10.260.40 | |
InterPro | IPR017970 IPR001356 IPR009057 IPR010982 IPR013847 IPR015585 IPR000327 | |
PANTHER | PTHR11636:SF15 | |
Pfam | PF00046 PF00157 | |
PRINTS | PR00028 | |
SMART | SM00389 SM00352 | |
SUPFAM | SSF46689 SSF47413 | |
PROSITE | PS00027 PS50071 PS00035 PS00465 PS51179 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000021 |
|
F |
Fig 3. Wwp2 binds oct4 both in vitro and in vivo |
complete | ||||
GO:0005634 |
nucleus |
ECO:0000314 |
C |
fig 2b |
complete | |||||
GO:0045941 |
positive regulation of transcription |
ECO:0000269 |
P |
fig 6 |
complete | |||||
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
F |
Protein Name: Oct 4 Uniprot ID: P20263 Notes: Fig. 1C and D shows that Mouse cells treated with Oct4 (a transcription factor identified in Uniprot as Pou5f1) exhibit increased mRNA levels of the genes Wdr5 and Dpy30 relative to the control. Fig 6B shows that Oct4 binds the promoter. |
complete | |||||
involved_in |
GO:0010629 |
negative regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0001158 |
enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0019955 |
cytokine binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048863 |
stem cell differentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048863 |
stem cell differentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0019827 |
stem cell population maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_regulation_target:(NCBI_Gene:22286) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0001952) |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042789 |
mRNA transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009786 |
regulation of asymmetric cell division |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006366 |
transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001824 |
blastocyst development |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:1990830 |
cellular response to leukemia inhibitory factor |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090308 |
regulation of methylation-dependent chromatin silencing |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090263 |
positive regulation of canonical Wnt signaling pathway |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090081 |
regulation of heart induction by regulation of canonical Wnt signaling pathway |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0071837 |
HMG box domain binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1359491 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0070974 |
POU domain binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1359491 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0060965 |
negative regulation of gene silencing by miRNA |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060913 |
cardiac cell fate determination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060795 |
cell fate commitment involved in formation of primary germ layer |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060391 |
positive regulation of SMAD protein signal transduction |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0048863 |
stem cell differentiation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
results_in_acquisition_of_features_of:(CL:0002322) |
Seeded From UniProt |
complete | ||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045955 |
negative regulation of calcium ion-dependent exocytosis |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:98364 |
P |
has_regulation_target:(MGI:MGI:98389) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:98364 |
P |
has_regulation_target:(MGI:MGI:95518) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:98364 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:98364 |
P |
has_regulation_target:(MGI:MGI:95518) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:98363 |
P |
has_regulation_target:(MGI:MGI:95518)|has_regulation_target:(MGI:MGI:1354755) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(MGI:MGI:101893)|has_regulation_target:(MGI:MGI:98364) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_regulation_target:(MGI:MGI:98389) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045596 |
negative regulation of cell differentiation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1201683 |
P |
regulates_o_results_in_acquisition_of_features_of:(CL:1000274) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0045165 |
cell fate commitment |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1933381 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0044798 |
nuclear transcription factor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_input:(MGI:MGI:98389) |
Seeded From UniProt |
complete | ||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_input:(MGI:MGI:96770)|has_input:(MGI:MGI:98658)|has_input:(MGI:MGI:98364)|has_input:(MGI:MGI:1919200) |
Seeded From UniProt |
complete | ||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1359491 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0035198 |
miRNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0035019 |
somatic stem cell population maintenance |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0032526 |
response to retinoic acid |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0031490 |
chromatin DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0030718 |
germ-line stem cell population maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:2177588,MGI:MGI:3578312 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0019827 |
stem cell population maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1933381 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0019827 |
stem cell population maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0019827 |
stem cell population maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0019827 |
stem cell population maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0017053 |
transcriptional repressor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010628 |
positive regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010468 |
regulation of gene expression |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010033 |
response to organic substance |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006366 |
transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1359491 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000023) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000023) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
GO:0036207 |
positive regulation of histone gene expression |
ECO:0000314 |
P |
Fig. 1C and D shows that Mouse cells treated with Oct4 exhibit increased mRNA levels of histone related genes Wdr5 and Actb relative to the control. |
complete | |||||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000023) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
GO:0060261 |
positive regulation of transcription initiation from RNA polymerase II promoter |
ECO:0000314 |
P |
In Figure 1, more specifically 1C and 1D, it is shown how POU domain, class 5, transcription factor 1/Transcription Factor Oct4 in Mus musculus upregulates Wdr5 and Dpy30 expression at the RNA level. Figure 6B then shows occupation of the promoter sequence through ChIP assays for the POU domain, class 5, transcription factor 1/Transcription Factor Oct4. |
complete | |||||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000023)|part_of:(CL:0000007) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16069) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16039) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0002322) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:17761)|part_of:(EMAPA:17760) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16040)|part_of:(EMAPA:16039) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16041) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16041) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000352) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000586) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000305 |
curator inference used in manual assertion |
GO:0003700 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1359491 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003714 |
transcription corepressor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003713 |
transcription coactivator activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1359491 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1359491 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003682 |
chromatin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_participant:(MGI:MGI:1098693)|has_participant:(MGI:MGI:2443298) |
Seeded From UniProt |
complete | ||
enables |
GO:0003682 |
chromatin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_participant:(MGI:MGI:101893)|has_participant:(MGI:MGI:98364) |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:98363 |
F |
has_participant:(MGI:MGI:95518)|has_participant:(MGI:MGI:1354755) |
Seeded From UniProt |
complete | |
enables |
GO:0003677 |
DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0003130 |
BMP signaling pathway involved in heart induction |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0001832 |
blastocyst growth |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:109345 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0001829 |
trophectodermal cell differentiation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1201683 |
P |
results_in_acquisition_of_features_of:(CL:1000274) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0001714 |
endodermal cell fate specification |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0001712 |
ectodermal cell fate commitment |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
results_in_commitment_to:(CL:1000274) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0001711 |
endodermal cell fate commitment |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
results_in_commitment_to:(CL:0000223) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0001710 |
mesodermal cell fate commitment |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
results_in_commitment_to:(CL:0000222) |
Seeded From UniProt |
complete | ||
enables |
GO:0001227 |
DNA-binding transcription repressor activity, RNA polymerase II-specific |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0001162 |
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:88361 |
P |
has_regulation_target:(MGI:MGI:95518)|has_regulation_target:(MGI:MGI:1276125) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0071837 |
HMG box domain binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6MG27 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0070974 |
POU domain binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6MG27 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6MG27 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034097 |
response to cytokine |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6MG27 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6MG27 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6MG27 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003713 |
transcription coactivator activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6MG27 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6MG27 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001356 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051898 |
negative regulation of protein kinase B signaling |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Xu, HM et al. (2004) Wwp2, an E3 ubiquitin ligase that targets transcription factor Oct-4 for ubiquitination. J. Biol. Chem. 279 23495-503 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Yang, Z et al. (2015) Physical Interactions and Functional Coordination between the Core Subunits of Set1/Mll Complexes and the Reprogramming Factors. PLoS ONE 10 e0145336 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 Campbell, PA & Rudnicki, MA (2013) Oct4 interaction with Hmgb2 regulates Akt signaling and pluripotency. Stem Cells 31 1107-20 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 Bae, KB et al. (2017) Serine 347 Phosphorylation by JNKs Negatively Regulates OCT4 Protein Stability in Mouse Embryonic Stem Cells. Stem Cell Reports 9 2050-2064 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 Esch, D et al. (2013) A unique Oct4 interface is crucial for reprogramming to pluripotency. Nat. Cell Biol. 15 295-301 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Nishimoto, M et al. (2003) The embryonic Octamer factor 3/4 displays distinct DNA binding specificity from those of other Octamer factors. Biochem. Biophys. Res. Commun. 302 581-6 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 Plachta, N et al. (2011) Oct4 kinetics predict cell lineage patterning in the early mammalian embryo. Nat. Cell Biol. 13 117-23 PubMed GONUTS page
- ↑ 8.0 8.1 Johansson, H & Simonsson, S (2010) Core transcription factors, Oct4, Sox2 and Nanog, individually form complexes with nucleophosmin (Npm1) to control embryonic stem (ES) cell fate determination. Aging (Albany NY) 2 815-22 PubMed GONUTS page
- ↑ van den Berg, DL et al. (2008) Estrogen-related receptor beta interacts with Oct4 to positively regulate Nanog gene expression. Mol. Cell. Biol. 28 5986-95 PubMed GONUTS page
- ↑ 10.0 10.1 Uranishi, K et al. (2013) Dax1 associates with Esrrb and regulates its function in embryonic stem cells. Mol. Cell. Biol. 33 2056-66 PubMed GONUTS page
- ↑ 11.0 11.1 Cao, Y et al. (2007) POU-V factors antagonize maternal VegT activity and beta-Catenin signaling in Xenopus embryos. EMBO J. 26 2942-54 PubMed GONUTS page
- ↑ Wei, Z et al. (2009) Klf4 interacts directly with Oct4 and Sox2 to promote reprogramming. Stem Cells 27 2969-78 PubMed GONUTS page
- ↑ Tarantino, C et al. (2010) miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic stem cells. FASEB J. 24 3255-63 PubMed GONUTS page
- ↑ 14.0 14.1 Niakan, KK et al. (2010) Sox17 promotes differentiation in mouse embryonic stem cells by directly regulating extraembryonic gene expression and indirectly antagonizing self-renewal. Genes Dev. 24 312-26 PubMed GONUTS page
- ↑ 15.0 15.1 15.2 Ng, CK et al. (2012) Deciphering the Sox-Oct partner code by quantitative cooperativity measurements. Nucleic Acids Res. 40 4933-41 PubMed GONUTS page
- ↑ 16.0 16.1 Schöler, HR et al. (1990) Oct-4: a germline-specific transcription factor mapping to the mouse t-complex. EMBO J. 9 2185-95 PubMed GONUTS page
- ↑ 17.0 17.1 17.2 Botquin, V et al. (1998) New POU dimer configuration mediates antagonistic control of an osteopontin preimplantation enhancer by Oct-4 and Sox-2. Genes Dev. 12 2073-90 PubMed GONUTS page
- ↑ Yuan, H et al. (1995) Developmental-specific activity of the FGF-4 enhancer requires the synergistic action of Sox2 and Oct-3. Genes Dev. 9 2635-45 PubMed GONUTS page
- ↑ 19.0 19.1 Li, J et al. (2007) A dominant-negative form of mouse SOX2 induces trophectoderm differentiation and progressive polyploidy in mouse embryonic stem cells. J. Biol. Chem. 282 19481-92 PubMed GONUTS page
- ↑ Tsuruzoe, S et al. (2006) Inhibition of DNA binding of Sox2 by the SUMO conjugation. Biochem. Biophys. Res. Commun. 351 920-6 PubMed GONUTS page
- ↑ 21.0 21.1 Maruyama, M et al. (2005) Differential roles for Sox15 and Sox2 in transcriptional control in mouse embryonic stem cells. J. Biol. Chem. 280 24371-9 PubMed GONUTS page
- ↑ 22.0 22.1 Chew, JL et al. (2005) Reciprocal transcriptional regulation of Pou5f1 and Sox2 via the Oct4/Sox2 complex in embryonic stem cells. Mol. Cell. Biol. 25 6031-46 PubMed GONUTS page
- ↑ 23.0 23.1 Rosner, MH et al. (1990) A POU-domain transcription factor in early stem cells and germ cells of the mammalian embryo. Nature 345 686-92 PubMed GONUTS page
- ↑ 24.0 24.1 24.2 Teo, AK et al. (2011) Pluripotency factors regulate definitive endoderm specification through eomesodermin. Genes Dev. 25 238-50 PubMed GONUTS page
- ↑ 25.0 25.1 25.2 25.3 25.4 Okamoto, K et al. (1990) A novel octamer binding transcription factor is differentially expressed in mouse embryonic cells. Cell 60 461-72 PubMed GONUTS page
- ↑ 26.0 26.1 26.2 26.3 26.4 26.5 Niwa, H et al. (2005) Interaction between Oct3/4 and Cdx2 determines trophectoderm differentiation. Cell 123 917-29 PubMed GONUTS page
- ↑ 27.0 27.1 Nichols, J et al. (1998) Formation of pluripotent stem cells in the mammalian embryo depends on the POU transcription factor Oct4. Cell 95 379-91 PubMed GONUTS page
- ↑ Wang, L & Schultz, GA (1996) Expression of Oct-4 during differentiation of murine F9 cells. Biochem. Cell Biol. 74 579-84 PubMed GONUTS page
- ↑ 29.0 29.1 29.2 Dailey, L et al. (1994) Interaction between a novel F9-specific factor and octamer-binding proteins is required for cell-type-restricted activity of the fibroblast growth factor 4 enhancer. Mol. Cell. Biol. 14 7758-69 PubMed GONUTS page
- ↑ Rosfjord, E & Rizzino, A (1994) The octamer motif present in the Rex-1 promoter binds Oct-1 and Oct-3 expressed by EC cells and ES cells. Biochem. Biophys. Res. Commun. 203 1795-802 PubMed GONUTS page
- ↑ Nishiyama, A et al. (2009) Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors. Cell Stem Cell 5 420-33 PubMed GONUTS page
- ↑ 32.0 32.1 32.2 Kunarso, G et al. (2008) Detailed characterization of the mouse embryonic stem cell transcriptome reveals novel genes and intergenic splicing associated with pluripotency. BMC Genomics 9 155 PubMed GONUTS page
- ↑ 33.0 33.1 33.2 Loh, YH et al. (2007) Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate self-renewal in embryonic stem cells. Genes Dev. 21 2545-57 PubMed GONUTS page
- ↑ Schöler, HR et al. (1990) New type of POU domain in germ line-specific protein Oct-4. Nature 344 435-9 PubMed GONUTS page
- ↑ Loh, YH et al. (2006) The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells. Nat. Genet. 38 431-40 PubMed GONUTS page
- ↑ Payer, B et al. (2013) Tsix RNA and the germline factor, PRDM14, link X reactivation and stem cell reprogramming. Mol. Cell 52 805-18 PubMed GONUTS page
- ↑ Kehler, J et al. (2004) Oct4 is required for primordial germ cell survival. EMBO Rep. 5 1078-83 PubMed GONUTS page
- ↑ Kagey, MH et al. (2010) Mediator and cohesin connect gene expression and chromatin architecture. Nature 467 430-5 PubMed GONUTS page
- ↑ Ivanova, N et al. (2006) Dissecting self-renewal in stem cells with RNA interference. Nature 442 533-8 PubMed GONUTS page
- ↑ 40.0 40.1 Velkey, JM & O'Shea, KS (2003) Oct4 RNA interference induces trophectoderm differentiation in mouse embryonic stem cells. Genesis 37 18-24 PubMed GONUTS page
- ↑ 41.0 41.1 41.2 41.3 Tokuzawa, Y et al. (2003) Fbx15 is a novel target of Oct3/4 but is dispensable for embryonic stem cell self-renewal and mouse development. Mol. Cell. Biol. 23 2699-708 PubMed GONUTS page
- ↑ 42.0 42.1 Palmieri, SL et al. (1994) Oct-4 transcription factor is differentially expressed in the mouse embryo during establishment of the first two extraembryonic cell lineages involved in implantation. Dev. Biol. 166 259-67 PubMed GONUTS page
- ↑ 43.0 43.1 Lorthongpanich, C et al. (2013) Temporal reduction of LATS kinases in the early preimplantation embryo prevents ICM lineage differentiation. Genes Dev. 27 1441-6 PubMed GONUTS page
- ↑ 44.0 44.1 Monti, M & Redi, C (2009) Oogenesis specific genes (Nobox, Oct4, Bmp15, Gdf9, Oogenesin1 and Oogenesin2) are differentially expressed during natural and gonadotropin-induced mouse follicular development. Mol. Reprod. Dev. 76 994-1003 PubMed GONUTS page
- ↑ Pesce, M et al. (1998) Differential expression of the Oct-4 transcription factor during mouse germ cell differentiation. Mech. Dev. 71 89-98 PubMed GONUTS page
- ↑ Wang, C et al. (2015) Rbm46 regulates trophectoderm differentiation by stabilizing Cdx2 mRNA in early mouse embryos. Stem Cells Dev. 24 904-15 PubMed GONUTS page
- ↑ Shen, J et al. (2015) Pwp1 is required for the differentiation potential of mouse embryonic stem cells through regulating Stat3 signaling. Stem Cells 33 661-73 PubMed GONUTS page
- ↑ Wang, L et al. (2013) The THO complex regulates pluripotency gene mRNA export and controls embryonic stem cell self-renewal and somatic cell reprogramming. Cell Stem Cell 13 676-90 PubMed GONUTS page
- ↑ Iwafuchi-Doi, M et al. (2012) Transcriptional regulatory networks in epiblast cells and during anterior neural plate development as modeled in epiblast stem cells. Development 139 3926-37 PubMed GONUTS page
- ↑ Turco, MY et al. (2012) Cellular heterogeneity during embryonic stem cell differentiation to epiblast stem cells is revealed by the ShcD/RaLP adaptor protein. Stem Cells 30 2423-36 PubMed GONUTS page
- ↑ Qin, J et al. (2012) The polycomb group protein L3mbtl2 assembles an atypical PRC1-family complex that is essential in pluripotent stem cells and early development. Cell Stem Cell 11 319-32 PubMed GONUTS page
- ↑ Ma, P et al. (2010) Metastasis tumor antigen 2 (MTA2) is involved in proper imprinted expression of H19 and Peg3 during mouse preimplantation development. Biol. Reprod. 83 1027-35 PubMed GONUTS page
- ↑ Zalzman, M et al. (2010) Zscan4 regulates telomere elongation and genomic stability in ES cells. Nature 464 858-63 PubMed GONUTS page
- ↑ Yamada, M et al. (2010) Involvement of a novel preimplantation-specific gene encoding the high mobility group box protein Hmgpi in early embryonic development. Hum. Mol. Genet. 19 480-93 PubMed GONUTS page
- ↑ Brown, L & Brown, S (2009) Zic2 is expressed in pluripotent cells in the blastocyst and adult brain expression overlaps with makers of neurogenesis. Gene Expr. Patterns 9 43-9 PubMed GONUTS page
- ↑ Gao, X et al. (2008) ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a. Proc. Natl. Acad. Sci. U.S.A. 105 6656-61 PubMed GONUTS page
- ↑ Strizzi, L et al. (2008) Netrin-1 can affect morphogenesis and differentiation of the mouse mammary gland. J. Cell. Physiol. 216 824-34 PubMed GONUTS page
- ↑ Wang, H et al. (2008) Zonula occludens-1 (ZO-1) is involved in morula to blastocyst transformation in the mouse. Dev. Biol. 318 112-25 PubMed GONUTS page
- ↑ Kuntz, S et al. (2008) Tex19, a mammalian-specific protein with a restricted expression in pluripotent stem cells and germ line. Stem Cells 26 734-44 PubMed GONUTS page
- ↑ Seandel, M et al. (2007) Generation of functional multipotent adult stem cells from GPR125+ germline progenitors. Nature 449 346-50 PubMed GONUTS page
- ↑ Kan, NG et al. (2007) Gene replacement reveals a specific role for E-cadherin in the formation of a functional trophectoderm. Development 134 31-41 PubMed GONUTS page
- ↑ Cormier, S et al. (2006) The murine ortholog of notchless, a direct regulator of the notch pathway in Drosophila melanogaster, is essential for survival of inner cell mass cells. Mol. Cell. Biol. 26 3541-9 PubMed GONUTS page
- ↑ Barrow, KM et al. (2005) Embryonic expression of murine 5T4 oncofoetal antigen is associated with morphogenetic events at implantation and in developing epithelia. Dev. Dyn. 233 1535-45 PubMed GONUTS page
- ↑ Kemler, R et al. (2004) Stabilization of beta-catenin in the mouse zygote leads to premature epithelial-mesenchymal transition in the epiblast. Development 131 5817-24 PubMed GONUTS page
- ↑ Liu, L et al. (2004) Effect of ploidy and parental genome composition on expression of Oct-4 protein in mouse embryos. Gene Expr. Patterns 4 433-41 PubMed GONUTS page
- ↑ Durcova-Hills, G et al. (2003) Developmental fate of embryonic germ cells (EGCs), in vivo and in vitro. Differentiation 71 135-41 PubMed GONUTS page
- ↑ Koh, KP et al. (2011) Tet1 and Tet2 regulate 5-hydroxymethylcytosine production and cell lineage specification in mouse embryonic stem cells. Cell Stem Cell 8 200-13 PubMed GONUTS page
- ↑ Tam, WL et al. (2008) T-cell factor 3 regulates embryonic stem cell pluripotency and self-renewal by the transcriptional control of multiple lineage pathways. Stem Cells 26 2019-31 PubMed GONUTS page
- ↑ Zhang, K et al. (2013) CTR9/PAF1c regulates molecular lineage identity, histone H3K36 trimethylation and genomic imprinting during preimplantation development. Dev. Biol. 383 15-27 PubMed GONUTS page
- ↑ 70.0 70.1 70.2 Niwa, H et al. (2000) Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells. Nat. Genet. 24 372-6 PubMed GONUTS page
c
- GO:0060913 ! cardiac cell fate determination
- GO:1990830 ! cellular response to leukemia inhibitory factor
- GO:0045165 ! cell fate commitment
- GO:0060795 ! cell fate commitment involved in formation of primary germ layer
- Chordata
- GO:0003682 ! chromatin binding
- GO:0031490 ! chromatin DNA binding
- Craniata
- GO:0019955 ! cytokine binding
- GO:0005737 ! cytoplasm
- GO:0005829 ! cytosol
d
- GO:0000981 ! DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:0003700 ! DNA-binding transcription factor activity
- GO:0001227 ! DNA-binding transcription repressor activity, RNA polymerase II-specific
- GO:0001228 ! DNA-binding transcription activator activity, RNA polymerase II-specific
- GO:0003677 ! DNA binding
e
m
n
- GO:0010629 ! negative regulation of gene expression
- GO:0045596 ! negative regulation of cell differentiation
- GO:0051898 ! negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
- GO:0000122 ! negative regulation of transcription by RNA polymerase II
- GO:0045892 ! negative regulation of DNA-templated transcription
- GO:0045955 ! negative regulation of calcium ion-dependent exocytosis
- GO:0060965 ! negative regulation of miRNA-mediated gene silencing
- GO:0000790 ! nuclear chromatin
- GO:0044798 ! nuclear transcription factor complex
- GO:0005730 ! nucleolus
- GO:0005654 ! nucleoplasm
- GO:0005634 ! nucleus
o
- GO:0003130 ! obsolete BMP signaling pathway involved in heart induction
- GO:0036207 ! obsolete positive regulation of histone gene expression
- GO:0090081 ! obsolete regulation of heart induction by regulation of canonical Wnt signaling pathway
- GO:0090308 ! obsolete regulation of DNA methylation-dependent heterochromatin formation
- GO:0010033 ! obsolete response to organic substance
p
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0060391 ! positive regulation of SMAD protein signal transduction
- GO:0045941 ! positive regulation of transcription
- GO:0060261 ! positive regulation of transcription initiation by RNA polymerase II
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0010628 ! positive regulation of gene expression
- GO:0090263 ! positive regulation of canonical Wnt signaling pathway
- GO:0070974 ! POU domain binding
- GO:0046982 ! protein heterodimerization activity
r
- GO:0006355 ! regulation of DNA-templated transcription
- GO:0009786 ! regulation of asymmetric cell division
- GO:0010468 ! regulation of gene expression
- GO:0032526 ! response to retinoic acid
- GO:0034097 ! response to cytokine
- GO:0001162 ! RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
- GO:0000978 ! RNA polymerase II cis-regulatory region sequence-specific DNA binding
- Rodentia
s
t
- GO:0017053 ! transcription repressor complex
- GO:0003713 ! transcription coactivator activity
- GO:0008134 ! transcription factor binding
- GO:0006366 ! transcription by RNA polymerase II
- GO:0000976 ! transcription cis-regulatory region binding
- GO:0044212 ! transcription regulatory region DNA binding
- GO:0005667 ! transcription regulator complex
- GO:0003714 ! transcription corepressor activity
- GO:0001829 ! trophectodermal cell differentiation