GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

MOUSE:PO5F1

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Pou5f1 (synonyms: Oct-3, Oct-4, Otf-3, Otf3)
Protein Name(s) POU domain, class 5, transcription factor 1

NF-A3 Octamer-binding protein 3 Oct-3 Octamer-binding protein 4 Oct-4 Octamer-binding transcription factor 3 OTF-3

External Links
UniProt P20263
EMBL M34381
X52437
S58426
S58422
S58423
S58424
S58425
BC068268
CCDS CCDS37600.1
PIR A34672
S17313
RefSeq NP_038661.2
UniGene Mm.17031
PDB 1OCP
3L1P
PDBsum 1OCP
3L1P
ProteinModelPortal P20263
SMR P20263
BioGrid 202313
DIP DIP-29931N
IntAct P20263
STRING 10090.ENSMUSP00000025271
PhosphoSite P20263
PRIDE P20263
Ensembl ENSMUST00000025271
GeneID 18999
KEGG mmu:18999
UCSC uc008chu.2
CTD 5460
MGI MGI:101893
eggNOG NOG329627
GeneTree ENSGT00760000118935
HOGENOM HOG000089941
HOVERGEN HBG057998
InParanoid P20263
KO K09367
OMA LENMFLQ
OrthoDB EOG7DJSMG
PhylomeDB P20263
TreeFam TF316413
Reactome REACT_216222
REACT_220962
EvolutionaryTrace P20263
NextBio 295410
PRO PR:P20263
Proteomes UP000000589
Bgee P20263
CleanEx MM_POU5F1
ExpressionAtlas P20263
Genevestigator P20263
GO GO:0005737
GO:0044798
GO:0005730
GO:0005654
GO:0005634
GO:0005667
GO:0017053
GO:0003682
GO:0003677
GO:0046982
GO:0000978
GO:0001077
GO:0001105
GO:0043565
GO:0000981
GO:0003700
GO:0003714
GO:0008134
GO:0044212
GO:0031625
GO:0001824
GO:0045165
GO:0001712
GO:0001711
GO:0001714
GO:0030718
GO:0001710
GO:0042789
GO:0045955
GO:0045596
GO:0051898
GO:0000122
GO:0045892
GO:0051897
GO:0045944
GO:0045893
GO:0009786
GO:0006355
GO:0034097
GO:0010033
GO:0032526
GO:0048863
GO:0019827
GO:0006366
GO:0001829
Gene3D 1.10.10.60
1.10.260.40
InterPro IPR017970
IPR001356
IPR009057
IPR010982
IPR013847
IPR015585
IPR000327
PANTHER PTHR11636:SF15
Pfam PF00046
PF00157
PRINTS PR00028
SMART SM00389
SM00352
SUPFAM SSF46689
SSF47413
PROSITE PS00027
PS50071
PS00035
PS00465
PS51179

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0031625

ubiquitin protein ligase binding

PMID:15047715[1]

ECO:0000021

UniProtKB:Q9DBH0


F

Fig 3. Wwp2 binds oct4 both in vitro and in vivo

complete

GO:0005634

nucleus

PMID:15047715[1]

ECO:0000314

C

fig 2b

complete

GO:0045941

positive regulation of transcription

PMID:15047715[1]

ECO:0000269

P

fig 6

complete

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:26691508[2]

ECO:0000314

F

Protein Name: Oct 4 Uniprot ID: P20263 Notes: Fig. 1C and D shows that Mouse cells treated with Oct4 (a transcription factor identified in Uniprot as Pou5f1) exhibit increased mRNA levels of the genes Wdr5 and Dpy30 relative to the control. Fig 6B shows that Oct4 binds the promoter.

complete
CACAO 13344

involved_in

GO:0010629

negative regulation of gene expression

PMID:23495099[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:23495099[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:23495099[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0001158

enhancer sequence-specific DNA binding

PMID:23495099[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019955

cytokine binding

PMID:23495099[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:29153991[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0048863

stem cell differentiation

PMID:29153991[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:29153991[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:29153991[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:29153991[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0048863

stem cell differentiation

PMID:23376973[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0019827

stem cell population maintenance

PMID:23376973[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:23376973[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:23376973[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:23376973[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:12615074[6]

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(NCBI_Gene:22286)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:12615074[6]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001952)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:12615074[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0042789

mRNA transcription by RNA polymerase II

PMID:15047715[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0031625

ubiquitin protein ligase binding

PMID:15047715[1]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9DBH0

F

Seeded From UniProt

complete

involved_in

GO:0009786

regulation of asymmetric cell division

PMID:21258368[7]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:21076177[8]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P48432

F

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

PMID:15047715[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

PMID:21076177[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18662995[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21258368[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0001824

blastocyst development

PMID:21258368[7]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:15047715[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:23508100[10]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:23508100[10]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:17541407[11]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:19816951[12]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q60793

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:17541407[11]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P70062

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1990830

cellular response to leukemia inhibitory factor

PMID:20439489[13]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0090308

regulation of methylation-dependent chromatin silencing

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0090263

positive regulation of canonical Wnt signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0090081

regulation of heart induction by regulation of canonical Wnt signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

enables

GO:0071837

HMG box domain binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1359491

F

Seeded From UniProt

complete

enables

GO:0070974

POU domain binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1359491

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060965

negative regulation of gene silencing by miRNA

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060913

cardiac cell fate determination

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060795

cell fate commitment involved in formation of primary germ layer

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060391

positive regulation of SMAD protein signal transduction

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048863

stem cell differentiation

PMID:20123909[14]

ECO:0000314

direct assay evidence used in manual assertion

P

results_in_acquisition_of_features_of:(CL:0002322)

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

PMID:22344693[15]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045955

negative regulation of calcium ion-dependent exocytosis

PMID:2357966[16]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:9649510[17]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:98364

P

has_regulation_target:(MGI:MGI:98389)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:7590241[18]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:98364

P

has_regulation_target:(MGI:MGI:95518)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:17507372[19]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:98364

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:17097055[20]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:98364

P

has_regulation_target:(MGI:MGI:95518)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:15863505[21]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:98363
MGI:MGI:98364

P

has_regulation_target:(MGI:MGI:95518)|has_regulation_target:(MGI:MGI:1354755)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:15988017[22]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(MGI:MGI:101893)|has_regulation_target:(MGI:MGI:98364)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:9649510[17]

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(MGI:MGI:98389)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:1972777[23]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21245162[24]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045893

positive regulation of transcription, DNA-templated

PMID:1967980[25]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

PMID:1967980[25]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045596

negative regulation of cell differentiation

PMID:16325584[26]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1201683

P

regulates_o_results_in_acquisition_of_features_of:(CL:1000274)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045165

cell fate commitment

PMID:9814708[27]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1933381

P

Seeded From UniProt

complete

part_of

GO:0044798

nuclear transcription factor complex

PMID:22344693[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:9649510[17]

ECO:0000314

direct assay evidence used in manual assertion

F

has_input:(MGI:MGI:98389)

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:8960364[28]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:7969117[29]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:7945330[30]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:19796622[31]

ECO:0000314

direct assay evidence used in manual assertion

F

has_input:(MGI:MGI:96770)|has_input:(MGI:MGI:98658)|has_input:(MGI:MGI:98364)|has_input:(MGI:MGI:1919200)

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:18400104[32]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:17938240[33]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:1690859[34]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:16518401[35]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:21245162[24]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1359491

F

Seeded From UniProt

complete

enables

GO:0035198

miRNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035019

somatic stem cell population maintenance

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0032526

response to retinoic acid

PMID:18400104[32]

ECO:0000314

direct assay evidence used in manual assertion

P

  • occurs_in:(EMAPA:16039)
  • occurs_in:(CL:0000034)

Seeded From UniProt

complete

enables

GO:0031625

ubiquitin protein ligase binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

enables

GO:0031490

chromatin DNA binding

PMID:24268575[36]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030718

germ-line stem cell population maintenance

PMID:15486564[37]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2177588,MGI:MGI:3578312

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0019827

stem cell population maintenance

PMID:9814708[27]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1933381

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0019827

stem cell population maintenance

PMID:20720539[38]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0019827

stem cell population maintenance

PMID:16767105[39]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0019827

stem cell population maintenance

PMID:14502573[40]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0017053

transcriptional repressor complex

PMID:16325584[26]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010628

positive regulation of gene expression

PMID:17938240[33]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010468

regulation of gene expression

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010033

response to organic substance

PMID:18400104[32]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006366

transcription by RNA polymerase II

PMID:1967980[25]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006355

regulation of transcription, DNA-templated

PMID:12665572[41]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1359491

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

C

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:7958450[42]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000023)

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:23824537[43]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:19480014[44]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000023)

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

C

Seeded From UniProt

complete

GO:0036207

positive regulation of histone gene expression

PMID:26691508[2]

ECO:0000314

P

Fig. 1C and D shows that Mouse cells treated with Oct4 exhibit increased mRNA levels of histone related genes Wdr5 and Actb relative to the control.

complete

part_of

GO:0005730

nucleolus

PMID:19480014[44]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000023)

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

PMID:7969117[29]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

GO:0060261

positive regulation of transcription initiation from RNA polymerase II promoter

PMID:26691508[2]

ECO:0000314

P

In Figure 1, more specifically 1C and 1D, it is shown how POU domain, class 5, transcription factor 1/Transcription Factor Oct4 in Mus musculus upregulates Wdr5 and Dpy30 expression at the RNA level. Figure 6B then shows occupation of the promoter sequence through ChIP assays for the POU domain, class 5, transcription factor 1/Transcription Factor Oct4.

complete
CACAO 13461

part_of

GO:0005667

transcription factor complex

PMID:17507372[19]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:9507072[45]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(EMAPA:17962)
  • part_of:(CL:0000023)|part_of:(EMAPA:17972)
  • part_of:(CL:0000020)|part_of:(EMAPA:17386)
  • part_of:(CL:0000670)|part_of:(EMAPA:16578)
  • part_of:(CL:0000670)|part_of:(EMAPA:17965)
  • part_of:(CL:0000670)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:7969117[29]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:7958450[42]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000023)|part_of:(CL:0000007)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:25397698[46]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:25335925[47]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:24315442[48]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:23824537[43]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:22992956[49]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(EMAPA:16069)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:22948967[50]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:22770845[51]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20720167[52]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(EMAPA:16039)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20336070[53]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0002322)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20123909[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:19915186[54]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18755297[55]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18448678[56]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18425773[57]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(EMAPA:17761)|part_of:(EMAPA:17760)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18423437[58]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(EMAPA:16040)|part_of:(EMAPA:16039)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18096721[59]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(EMAPA:16037)
  • part_of:(CL:0000007)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:17882221[60]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(EMAPA:17972)
  • part_of:(CL:0000499)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:17138661[61]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(EMAPA:16041)
  • part_of:(CL:0000007)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16611995[62]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(EMAPA:16041)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16325584[26]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:15977177[63]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:15525667[64]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(EMAPA:16041)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:15183310[65]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(EMAPA:16037)
  • part_of:(CL:0000007)|part_of:(EMAPA:16040)
  • part_of:(CL:0000007)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:14502573[40]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000352)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:12641567[66]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000586)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:12665572[41]

ECO:0000305

curator inference used in manual assertion

GO:0003700

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1359491

C

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

PMID:16325584[26]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1359491

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:2357966[16]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:1972777[23]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:1967980[25]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:12665572[41]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1359491

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:21295276[67]

ECO:0000314

direct assay evidence used in manual assertion

F

has_participant:(MGI:MGI:1098693)|has_participant:(MGI:MGI:2443298)

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:18467660[68]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:15988017[22]

ECO:0000314

direct assay evidence used in manual assertion

F

has_participant:(MGI:MGI:101893)|has_participant:(MGI:MGI:98364)

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:15863505[21]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:98363
MGI:MGI:98364

F

has_participant:(MGI:MGI:95518)|has_participant:(MGI:MGI:1354755)

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:1967980[25]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:12665572[41]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0003130

BMP signaling pathway involved in heart induction

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001832

blastocyst growth

PMID:24036311[69]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:109345

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001829

trophectodermal cell differentiation

PMID:16325584[26]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1201683

P

results_in_acquisition_of_features_of:(CL:1000274)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001714

endodermal cell fate specification

PMID:21245162[24]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001712

ectodermal cell fate commitment

PMID:10742100[70]

ECO:0000314

direct assay evidence used in manual assertion

P

results_in_commitment_to:(CL:1000274)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001711

endodermal cell fate commitment

PMID:10742100[70]

ECO:0000314

direct assay evidence used in manual assertion

P

results_in_commitment_to:(CL:0000223)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001710

mesodermal cell fate commitment

PMID:10742100[70]

ECO:0000314

direct assay evidence used in manual assertion

P

results_in_commitment_to:(CL:0000222)

Seeded From UniProt

complete

enables

GO:0001227

DNA-binding transcription repressor activity, RNA polymerase II-specific

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

enables

GO:0001162

RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding

PMID:17938240[33]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:22344693[15]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:16325584[26]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:88361
MGI:MGI:88362

P

has_regulation_target:(MGI:MGI:95518)|has_regulation_target:(MGI:MGI:1276125)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q01860

P

Seeded From UniProt

complete

enables

GO:0071837

HMG box domain binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6MG27
ensembl:ENSRNOP00000065216

F

Seeded From UniProt

complete

enables

GO:0070974

POU domain binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6MG27
ensembl:ENSRNOP00000065216

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6MG27
ensembl:ENSRNOP00000065216

F

Seeded From UniProt

complete

involved_in

GO:0034097

response to cytokine

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6MG27
ensembl:ENSRNOP00000065216

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6MG27
ensembl:ENSRNOP00000065216

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6MG27
ensembl:ENSRNOP00000065216

C

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6MG27
ensembl:ENSRNOP00000065216

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6MG27
ensembl:ENSRNOP00000065216

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001356
InterPro:IPR009057
InterPro:IPR010982
InterPro:IPR013847

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000327

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000327
InterPro:IPR017970

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017970

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051898

negative regulation of protein kinase B signaling

PMID:23495099[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037
GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238
UniProtKB-KW:KW-0371

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Xu, HM et al. (2004) Wwp2, an E3 ubiquitin ligase that targets transcription factor Oct-4 for ubiquitination. J. Biol. Chem. 279 23495-503 PubMed GONUTS page
  2. 2.0 2.1 2.2 Yang, Z et al. (2015) Physical Interactions and Functional Coordination between the Core Subunits of Set1/Mll Complexes and the Reprogramming Factors. PLoS ONE 10 e0145336 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 3.5 Campbell, PA & Rudnicki, MA (2013) Oct4 interaction with Hmgb2 regulates Akt signaling and pluripotency. Stem Cells 31 1107-20 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 4.4 Bae, KB et al. (2017) Serine 347 Phosphorylation by JNKs Negatively Regulates OCT4 Protein Stability in Mouse Embryonic Stem Cells. Stem Cell Reports 9 2050-2064 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 Esch, D et al. (2013) A unique Oct4 interface is crucial for reprogramming to pluripotency. Nat. Cell Biol. 15 295-301 PubMed GONUTS page
  6. 6.0 6.1 6.2 Nishimoto, M et al. (2003) The embryonic Octamer factor 3/4 displays distinct DNA binding specificity from those of other Octamer factors. Biochem. Biophys. Res. Commun. 302 581-6 PubMed GONUTS page
  7. 7.0 7.1 7.2 Plachta, N et al. (2011) Oct4 kinetics predict cell lineage patterning in the early mammalian embryo. Nat. Cell Biol. 13 117-23 PubMed GONUTS page
  8. 8.0 8.1 Johansson, H & Simonsson, S (2010) Core transcription factors, Oct4, Sox2 and Nanog, individually form complexes with nucleophosmin (Npm1) to control embryonic stem (ES) cell fate determination. Aging (Albany NY) 2 815-22 PubMed GONUTS page
  9. van den Berg, DL et al. (2008) Estrogen-related receptor beta interacts with Oct4 to positively regulate Nanog gene expression. Mol. Cell. Biol. 28 5986-95 PubMed GONUTS page
  10. 10.0 10.1 Uranishi, K et al. (2013) Dax1 associates with Esrrb and regulates its function in embryonic stem cells. Mol. Cell. Biol. 33 2056-66 PubMed GONUTS page
  11. 11.0 11.1 Cao, Y et al. (2007) POU-V factors antagonize maternal VegT activity and beta-Catenin signaling in Xenopus embryos. EMBO J. 26 2942-54 PubMed GONUTS page
  12. Wei, Z et al. (2009) Klf4 interacts directly with Oct4 and Sox2 to promote reprogramming. Stem Cells 27 2969-78 PubMed GONUTS page
  13. Tarantino, C et al. (2010) miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic stem cells. FASEB J. 24 3255-63 PubMed GONUTS page
  14. 14.0 14.1 Niakan, KK et al. (2010) Sox17 promotes differentiation in mouse embryonic stem cells by directly regulating extraembryonic gene expression and indirectly antagonizing self-renewal. Genes Dev. 24 312-26 PubMed GONUTS page
  15. 15.0 15.1 15.2 Ng, CK et al. (2012) Deciphering the Sox-Oct partner code by quantitative cooperativity measurements. Nucleic Acids Res. 40 4933-41 PubMed GONUTS page
  16. 16.0 16.1 Schöler, HR et al. (1990) Oct-4: a germline-specific transcription factor mapping to the mouse t-complex. EMBO J. 9 2185-95 PubMed GONUTS page
  17. 17.0 17.1 17.2 Botquin, V et al. (1998) New POU dimer configuration mediates antagonistic control of an osteopontin preimplantation enhancer by Oct-4 and Sox-2. Genes Dev. 12 2073-90 PubMed GONUTS page
  18. Yuan, H et al. (1995) Developmental-specific activity of the FGF-4 enhancer requires the synergistic action of Sox2 and Oct-3. Genes Dev. 9 2635-45 PubMed GONUTS page
  19. 19.0 19.1 Li, J et al. (2007) A dominant-negative form of mouse SOX2 induces trophectoderm differentiation and progressive polyploidy in mouse embryonic stem cells. J. Biol. Chem. 282 19481-92 PubMed GONUTS page
  20. Tsuruzoe, S et al. (2006) Inhibition of DNA binding of Sox2 by the SUMO conjugation. Biochem. Biophys. Res. Commun. 351 920-6 PubMed GONUTS page
  21. 21.0 21.1 Maruyama, M et al. (2005) Differential roles for Sox15 and Sox2 in transcriptional control in mouse embryonic stem cells. J. Biol. Chem. 280 24371-9 PubMed GONUTS page
  22. 22.0 22.1 Chew, JL et al. (2005) Reciprocal transcriptional regulation of Pou5f1 and Sox2 via the Oct4/Sox2 complex in embryonic stem cells. Mol. Cell. Biol. 25 6031-46 PubMed GONUTS page
  23. 23.0 23.1 Rosner, MH et al. (1990) A POU-domain transcription factor in early stem cells and germ cells of the mammalian embryo. Nature 345 686-92 PubMed GONUTS page
  24. 24.0 24.1 24.2 Teo, AK et al. (2011) Pluripotency factors regulate definitive endoderm specification through eomesodermin. Genes Dev. 25 238-50 PubMed GONUTS page
  25. 25.0 25.1 25.2 25.3 25.4 Okamoto, K et al. (1990) A novel octamer binding transcription factor is differentially expressed in mouse embryonic cells. Cell 60 461-72 PubMed GONUTS page
  26. 26.0 26.1 26.2 26.3 26.4 26.5 Niwa, H et al. (2005) Interaction between Oct3/4 and Cdx2 determines trophectoderm differentiation. Cell 123 917-29 PubMed GONUTS page
  27. 27.0 27.1 Nichols, J et al. (1998) Formation of pluripotent stem cells in the mammalian embryo depends on the POU transcription factor Oct4. Cell 95 379-91 PubMed GONUTS page
  28. Wang, L & Schultz, GA (1996) Expression of Oct-4 during differentiation of murine F9 cells. Biochem. Cell Biol. 74 579-84 PubMed GONUTS page
  29. 29.0 29.1 29.2 Dailey, L et al. (1994) Interaction between a novel F9-specific factor and octamer-binding proteins is required for cell-type-restricted activity of the fibroblast growth factor 4 enhancer. Mol. Cell. Biol. 14 7758-69 PubMed GONUTS page
  30. Rosfjord, E & Rizzino, A (1994) The octamer motif present in the Rex-1 promoter binds Oct-1 and Oct-3 expressed by EC cells and ES cells. Biochem. Biophys. Res. Commun. 203 1795-802 PubMed GONUTS page
  31. Nishiyama, A et al. (2009) Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors. Cell Stem Cell 5 420-33 PubMed GONUTS page
  32. 32.0 32.1 32.2 Kunarso, G et al. (2008) Detailed characterization of the mouse embryonic stem cell transcriptome reveals novel genes and intergenic splicing associated with pluripotency. BMC Genomics 9 155 PubMed GONUTS page
  33. 33.0 33.1 33.2 Loh, YH et al. (2007) Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate self-renewal in embryonic stem cells. Genes Dev. 21 2545-57 PubMed GONUTS page
  34. Schöler, HR et al. (1990) New type of POU domain in germ line-specific protein Oct-4. Nature 344 435-9 PubMed GONUTS page
  35. Loh, YH et al. (2006) The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells. Nat. Genet. 38 431-40 PubMed GONUTS page
  36. Payer, B et al. (2013) Tsix RNA and the germline factor, PRDM14, link X reactivation and stem cell reprogramming. Mol. Cell 52 805-18 PubMed GONUTS page
  37. Kehler, J et al. (2004) Oct4 is required for primordial germ cell survival. EMBO Rep. 5 1078-83 PubMed GONUTS page
  38. Kagey, MH et al. (2010) Mediator and cohesin connect gene expression and chromatin architecture. Nature 467 430-5 PubMed GONUTS page
  39. Ivanova, N et al. (2006) Dissecting self-renewal in stem cells with RNA interference. Nature 442 533-8 PubMed GONUTS page
  40. 40.0 40.1 Velkey, JM & O'Shea, KS (2003) Oct4 RNA interference induces trophectoderm differentiation in mouse embryonic stem cells. Genesis 37 18-24 PubMed GONUTS page
  41. 41.0 41.1 41.2 41.3 Tokuzawa, Y et al. (2003) Fbx15 is a novel target of Oct3/4 but is dispensable for embryonic stem cell self-renewal and mouse development. Mol. Cell. Biol. 23 2699-708 PubMed GONUTS page
  42. 42.0 42.1 Palmieri, SL et al. (1994) Oct-4 transcription factor is differentially expressed in the mouse embryo during establishment of the first two extraembryonic cell lineages involved in implantation. Dev. Biol. 166 259-67 PubMed GONUTS page
  43. 43.0 43.1 Lorthongpanich, C et al. (2013) Temporal reduction of LATS kinases in the early preimplantation embryo prevents ICM lineage differentiation. Genes Dev. 27 1441-6 PubMed GONUTS page
  44. 44.0 44.1 Monti, M & Redi, C (2009) Oogenesis specific genes (Nobox, Oct4, Bmp15, Gdf9, Oogenesin1 and Oogenesin2) are differentially expressed during natural and gonadotropin-induced mouse follicular development. Mol. Reprod. Dev. 76 994-1003 PubMed GONUTS page
  45. Pesce, M et al. (1998) Differential expression of the Oct-4 transcription factor during mouse germ cell differentiation. Mech. Dev. 71 89-98 PubMed GONUTS page
  46. Wang, C et al. (2015) Rbm46 regulates trophectoderm differentiation by stabilizing Cdx2 mRNA in early mouse embryos. Stem Cells Dev. 24 904-15 PubMed GONUTS page
  47. Shen, J et al. (2015) Pwp1 is required for the differentiation potential of mouse embryonic stem cells through regulating Stat3 signaling. Stem Cells 33 661-73 PubMed GONUTS page
  48. Wang, L et al. (2013) The THO complex regulates pluripotency gene mRNA export and controls embryonic stem cell self-renewal and somatic cell reprogramming. Cell Stem Cell 13 676-90 PubMed GONUTS page
  49. Iwafuchi-Doi, M et al. (2012) Transcriptional regulatory networks in epiblast cells and during anterior neural plate development as modeled in epiblast stem cells. Development 139 3926-37 PubMed GONUTS page
  50. Turco, MY et al. (2012) Cellular heterogeneity during embryonic stem cell differentiation to epiblast stem cells is revealed by the ShcD/RaLP adaptor protein. Stem Cells 30 2423-36 PubMed GONUTS page
  51. Qin, J et al. (2012) The polycomb group protein L3mbtl2 assembles an atypical PRC1-family complex that is essential in pluripotent stem cells and early development. Cell Stem Cell 11 319-32 PubMed GONUTS page
  52. Ma, P et al. (2010) Metastasis tumor antigen 2 (MTA2) is involved in proper imprinted expression of H19 and Peg3 during mouse preimplantation development. Biol. Reprod. 83 1027-35 PubMed GONUTS page
  53. Zalzman, M et al. (2010) Zscan4 regulates telomere elongation and genomic stability in ES cells. Nature 464 858-63 PubMed GONUTS page
  54. Yamada, M et al. (2010) Involvement of a novel preimplantation-specific gene encoding the high mobility group box protein Hmgpi in early embryonic development. Hum. Mol. Genet. 19 480-93 PubMed GONUTS page
  55. Brown, L & Brown, S (2009) Zic2 is expressed in pluripotent cells in the blastocyst and adult brain expression overlaps with makers of neurogenesis. Gene Expr. Patterns 9 43-9 PubMed GONUTS page
  56. Gao, X et al. (2008) ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a. Proc. Natl. Acad. Sci. U.S.A. 105 6656-61 PubMed GONUTS page
  57. Strizzi, L et al. (2008) Netrin-1 can affect morphogenesis and differentiation of the mouse mammary gland. J. Cell. Physiol. 216 824-34 PubMed GONUTS page
  58. Wang, H et al. (2008) Zonula occludens-1 (ZO-1) is involved in morula to blastocyst transformation in the mouse. Dev. Biol. 318 112-25 PubMed GONUTS page
  59. Kuntz, S et al. (2008) Tex19, a mammalian-specific protein with a restricted expression in pluripotent stem cells and germ line. Stem Cells 26 734-44 PubMed GONUTS page
  60. Seandel, M et al. (2007) Generation of functional multipotent adult stem cells from GPR125+ germline progenitors. Nature 449 346-50 PubMed GONUTS page
  61. Kan, NG et al. (2007) Gene replacement reveals a specific role for E-cadherin in the formation of a functional trophectoderm. Development 134 31-41 PubMed GONUTS page
  62. Cormier, S et al. (2006) The murine ortholog of notchless, a direct regulator of the notch pathway in Drosophila melanogaster, is essential for survival of inner cell mass cells. Mol. Cell. Biol. 26 3541-9 PubMed GONUTS page
  63. Barrow, KM et al. (2005) Embryonic expression of murine 5T4 oncofoetal antigen is associated with morphogenetic events at implantation and in developing epithelia. Dev. Dyn. 233 1535-45 PubMed GONUTS page
  64. Kemler, R et al. (2004) Stabilization of beta-catenin in the mouse zygote leads to premature epithelial-mesenchymal transition in the epiblast. Development 131 5817-24 PubMed GONUTS page
  65. Liu, L et al. (2004) Effect of ploidy and parental genome composition on expression of Oct-4 protein in mouse embryos. Gene Expr. Patterns 4 433-41 PubMed GONUTS page
  66. Durcova-Hills, G et al. (2003) Developmental fate of embryonic germ cells (EGCs), in vivo and in vitro. Differentiation 71 135-41 PubMed GONUTS page
  67. Koh, KP et al. (2011) Tet1 and Tet2 regulate 5-hydroxymethylcytosine production and cell lineage specification in mouse embryonic stem cells. Cell Stem Cell 8 200-13 PubMed GONUTS page
  68. Tam, WL et al. (2008) T-cell factor 3 regulates embryonic stem cell pluripotency and self-renewal by the transcriptional control of multiple lineage pathways. Stem Cells 26 2019-31 PubMed GONUTS page
  69. Zhang, K et al. (2013) CTR9/PAF1c regulates molecular lineage identity, histone H3K36 trimethylation and genomic imprinting during preimplantation development. Dev. Biol. 383 15-27 PubMed GONUTS page
  70. 70.0 70.1 70.2 Niwa, H et al. (2000) Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells. Nat. Genet. 24 372-6 PubMed GONUTS page