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User:Hbate

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CACAO Spring 2015

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
unacceptable?2015-02-09 11:27:54 CSTGO:0004842 ubiquitin-protein transferase activity ()PMID:25646469IDA: Inferred from Direct Assay
challenge
unacceptableHUMAN:ERBB22015-02-10 15:50:01 CSTGO:0001934 positive regulation of protein phosphorylation (P)PMID:25655188ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1; amplication or deletion of protein

challenge
unacceptableHUMAN:NSD32015-02-10 15:58:06 CSTGO:0008168 methyltransferase activity (F)PMID:25657825ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2; determined by nucleotide primer

challenge
unacceptableHUMAN:HEXA2015-02-10 16:01:53 CSTGO:0003824 catalytic activity (F)PMID:3377590ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1: chromatogram of mutations

challenge
unacceptableHUMAN:CLCN22015-02-10 16:08:55 CSTGO:0005216 ion channel activity (F)PMID:25626868ECO:0000314 direct assay evidence used in manual assertion

Figure 1; in vitro protein localization

challenge
unacceptableRAT:AQP22015-02-10 16:13:11 CSTGO:0003097 renal water transport (P)PMID:25658446ECO:0000314 direct assay evidence used in manual assertion

Figure 2 immuno blotting

challenge
requireschangesHUMAN:MEIS12015-02-10 16:20:08 CSTGO:0001525 angiogenesis (P)PMID:24642863ECO:0000314 direct assay evidence used in manual assertion

Figure 1: epigenetic signatures in vitro

challenge

acceptable:0
unacceptable:6
requires_changes:1
flagged:0

Annotations challenged by Hbate

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
requireschangesLhicks,
Team Ubiquitous Mafia
XENLA:CHFRGO:0051437 - obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition (P)PMID:11807090ECO:0000314 direct assay evidence used in manual assertionchallengeC: 3
acceptableLhicks,
Team Ubiquitous Mafia
HUMAN:TOPKGO:0005634 - nucleus (C)PMID:25575812ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2
requireschangesBbourgoyne,
Team Bio Bois
RAT:ADHXGO:0004022 - alcohol dehydrogenase (NAD+) activity (F)PMID:25641189ECO:0000314 direct assay evidence used in manual assertionchallengeC: 4
unacceptableBbourgoyne,
Team Bio Bois
HUMAN:TGM2GO:0071078 - fibronectin-tissue transglutaminase complex (C)PMID:25561282ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
unacceptableBbourgoyne,
Team Bio Bois
HUMAN:FEN1GO:0004519 - endonuclease activity (F)PMID:25650046ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
correctedthroughchallengesSedmondson,
Team Designated Drinkers
RAT:UT2GO:0015840 - urea transport (P)PMID:23552862ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 4

fixed by Bbourgoyne
unacceptableSedmondson,
Team Designated Drinkers
DROME:PEROGO:0055114 - obsolete oxidation-reduction process (P)PMID:24459295ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 2

0 annotations fixed by Hbate

What do the icons mean in the status column?

assessment icons.jpg