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Category:Phage Hunters Spring 2017

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cacao.jpg
CACAO
the intercollegiate annotation competition!
The Community Assessment of Community Annotation with Ontologies (CACAO) is a competition for teams of undergrads around the world to improve the functional annotation of genes. CACAO was developed and is currently run at Texas A&M University, along with many other institutions. If you are interested in participating, please email us - ecoliwiki@gmail.com.
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Scoreboard

Calendar of Rounds

Inning Activity Start End Notes

0

instruction

  • 2017-01-30
  • 06:00 PM
  • 2017-04-02
  • 05:59 PM

Instruction inning

1

annotation

  • 2017-04-02
  • 06:00 PM
  • 2017-04-09
  • 11:59 PM

First annotation inning

1

open

  • 2017-04-10
  • 01:00 AM
  • 2017-04-16
  • 11:59 PM

Annotation/challenge inning

3

annotation

  • 2017-04-17
  • 01:00 AM
  • 2017-04-23
  • 11:59 PM

Last annotation inning

4

open

  • 2017-04-24
  • 01:00 AM
  • 2017-06-02
  • 11:59 PM

Last chance to annotate/challenge!

Phage Hunters Spring 2017

Quick Links

  • Don't forget - no binding terms (i.e. DNA binding, etc) & no response to terms (i.e. response to heat, etc)
  • For more help on evidence codes
Look through the helpful handouts for students, this includes printable documents

Participating schools

  • University of Maryland, Baltimore County
  • Virginia Commonwealth University
  • Drexel University
  • Ekiti-State University
  • James Madison University

Lecture slides

Background info is at the About CACAO page. Links to new material will be posted here.


The below material is for regular CACAO, NOT the Phage Hunters. It may still be useful for students for background info.

Virus-related GO terms

  • For those of you interested in annotating proteins from viruses and phages:
  1. Serrano-Heras, G et al. (2007) Protein p56 from the Bacillus subtilis phage phi29 inhibits DNA-binding ability of uracil-DNA glycosylase. Nucleic Acids Res. 35 5393-401 PubMed GONUTS page

Subcategories

This category has the following 24 subcategories, out of 24 total.