It is now the 3rd CHALLENGE Period for CACAO Fall 2017! It will end on Sunday October 22, 2017 at 11:59 pm CDT
This is your chance to challenge other team's annotations. You may also DEFEND or suggest improvements to your own annotations IF they have been challenged. Please note, although we ENCOURAGE challenges, an excess of identical challenges that do not appear to be applicable to the annotation or well thought out will be considered spam and ignored.

Have any questions? Please email us at ecoliwiki@gmail.com

Category:CACAO Fall 2011

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Announcements

Scoreboard


CACAO survey


CACAO Fall 2011


  • We will be using GONUTS again for our competition meaning students can again choose to annotate any protein in UniProt.
  • slight change in plans! We will be working in Greenwich Mean Time (GMT) now for the competition. University College London has several grad students who will be participating... making them compete on CST seems extra mean since the rounds would start and finish at roughly 5-6am for them.


NEW CALENDAR FOR ROUNDS

Inning/Round Period Start - End (GMT)
( UCL )
Start - End (CST)
( TAMU, MSU, NDSU, & HBU )
Start - End (EST)
( Swarthmore & Hofstra )
1 Annotation Sept. 19, 00:00:00 - Sept. 25, 23:59:59 Sept. 18, 6:00pm - Sept. 25, 5:59pm Sept. 18, 7:00pm - Sept. 25, 6:59pm
1 Challenge Sept. 26, 00:00:00 - Oct. 2, 23:59:59 Sept. 25, 6:00pm - Oct. 2, 5:59pm Sept. 25, 7:00pm - Oct. 2, 6:59pm
2 Annotation Oct. 3, 00:00:00 - Oct. 9, 23:59:59 Oct. 2, 6:00pm - Oct. 9, 5:59pm Oct. 2, 7:00pm - Oct. 9, 6:59pm
2 Challenge Oct. 10, 00:00:00 - Oct. 16, 23:59:59 Oct. 9, 6:00pm - Oct. 16, 5:59pm Oct. 9, 7:00pm - Oct. 16, 6:59pm
3 Annotation Oct. 17, 00:00:00 - Oct. 23, 23:59:59 Oct. 16, 6:00pm - Oct. 23, 5:59pm Oct. 16, 7:00pm - Oct. 23, 6:59pm
3 Challenge Oct. 24, 00:00:00 - Oct. 30, 23:59:59 Oct. 23, 6:00pm - Oct. 30, 5:59pm Oct. 23, 7:00pm - Oct. 30, 6:59pm
4 Annotation Oct. 31, 00:00:00 - Nov. 6, 23:59:59 Oct. 30, 6:00pm - Nov. 6, 5:59pm Oct. 30, 7:00pm - Nov. 6, 6:59pm
4 Challenge Nov. 7, 00:00:00 - Nov. 13, 23:59:59 Nov. 6, 6:00pm - Nov. 13, 5:59pm Nov. 6, 7:00pm - Nov. 13, 6:59pm
5 Annotation Nov. 14, 00:00:00 - Nov. 20, 23:59:59 Nov. 13, 6:00pm - Nov. 20, 5:59pm Nov. 13, 7:00pm - Nov. 20, 6:59pm
5 Challenge Nov. 21, 00:00:00 - Nov. 27, 23:59:59 Nov. 20, 6:00pm - Nov. 27, 5:59pm Nov. 20, 7:00pm - Nov. 27, 6:59pm

Multi-Institutional Competition

The Setup

  • we will be running 5 rounds and instructors can choose any or all rounds of the open competition to participate in. Additionally, instructors can choose to run their own round with support from us.
  • click here for a list of the dates of each round

Advanced Biocuration Course for Undergraduates

  • this fall, we are adding to our courses with an advanced biocuration course at TAMU. The course requires previous enrollment/volunteering in CACAO and is meant to train undergraduates to become judges and assessors of the annotations contributed by students participating in CACAO. We feel this is the next step in the evolution of CACAO and offers students further advancement and training in functional annotation.

CACAO Materials


Class Information

  • Here's a list of the evidence codes that CACAO students may use:
  1. IDA: Inferred from Direct Assay
  2. IMP: Inferred from Mutant Phenotype
  3. IGI: Inferred from Genetic Interaction - requires with/from field to be filled in
  4. IEP: Inferred from Expression Pattern
  5. ISO: Inferred from Sequence Orthology - requires with/from field to be filled in
  6. ISA: Inferred from Sequence Alignment - requires with/from field to be filled in
  7. ISM: Inferred from Sequence Model - requires with/from field to be filled in
  8. IGC: Inferred from Genomic Context

Pages in category "CACAO Fall 2011"

The following 9 pages are in this category, out of 9 total.


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