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Category:Team Step 1 Nitrification

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StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptableAZOVI:NIFKAcalic1, Team Step 1 Nitrification2011-11-06 17:44:13 CSTGO:0009399 nitrogen fixation (P)PMID:2644218ECO:0000315 mutant phenotype evidence used in manual assertion

Table 4. Nitrogen fixation function of Nif K gene was determined by comparison with mutant strains for gene expression.

challenge
acceptable9BRAD:D0V0Y0Acalic1, Team Step 1 Nitrification2011-11-06 17:41:48 CSTGO:0016491 oxidoreductase activity (F)PMID:15034147ECO:0000255 match to sequence model evidence used in manual assertion

Figure 4. Phylogenetic tree comparing predicted nifH amino acid sequences among mutant phenotypes.

challenge
acceptableARATH:NIA1Tducha, Team Step 1 Nitrification2011-11-06 16:25:22 CSTGO:0008940 nitrate reductase activity (F)PMID:21772271ECO:0000314 direct assay evidence used in manual assertion

Fig. 4b shows how sumoylation increased NR activity in NIA1 and NIA2 in Arabidopsis.

challenge
requireschangesNITEU:HAOTducha, Team Step 1 Nitrification2011-11-06 15:39:35 CSTGO:0016491 oxidoreductase activity (F)PMID:8195067ECO:0000314 direct assay evidence used in manual assertion

Hydroxylamine is oxidized to nitrite by hydroxylamine oxidoreductase (HAO) in the periplasm of Nitrosomonas

europaea (p.3148)

challenge
updatedbyinstructorHALMT:NASDDhaase1, Team Step 1 Nitrification2011-11-06 15:35:55 CSTGO:0016491 oxidoreductase activity (F)PMID:11267765ECO:0000314 direct assay evidence used in manual assertion

Table I shows enzyme activity of purified NiR.

challenge
acceptableEMENI:DHE4Dhaase1, Team Step 1 Nitrification2011-11-06 14:34:22 CSTGO:0004354 glutamate dehydrogenase (NADP+) activity (F)PMID:4148302ECO:0000315 mutant phenotype evidence used in manual assertion

"Table I shows that gdhA mutants have decreased activities of NADPGDH."

challenge
acceptableNITEU:AMOADhaase1, Team Step 1 Nitrification2011-11-05 15:50:00 CDTGO:0004497 monooxygenase activity (F)PMID:9642187ECO:0000315 mutant phenotype evidence used in manual assertion

Table 3 shows that AmoA mutants that have a higher amount of AMO mRNA transcripts have a higher rate of ammonia-dependent oxygen uptake.

challenge
acceptable9CREN:Q701V3Dhaase1, Team Step 1 Nitrification2011-10-23 01:18:13 CDTGO:0004497 monooxygenase activity (F)PMID:16533068ECO:0000317 genomic context evidence used in manual assertion

Figure 4 (B) Shows the similarity of the C. symbiosum ammonia monooxygenase (acc) gene cluster and unlinked amoC3 locus to the bacterial operon from N. europaea.

challenge
acceptableNITEU:HAODhaase1, Team Step 1 Nitrification2011-10-22 23:20:44 CDTGO:0016491 oxidoreductase activity (F)PMID:227845ECO:0000314 direct assay evidence used in manual assertion

Table 1 indicates that the enzyme is reduced in the presence of sodium nitrite.

challenge
acceptableNITEU:AMOADhaase1, Team Step 1 Nitrification2011-10-22 22:00:15 CDTGO:0004497 monooxygenase activity (F)PMID:8458839ECO:0000314 direct assay evidence used in manual assertion

Table 2 shows AMO enzyme activity with and without copper chloride.

challenge
acceptableNITEU:AMOADhaase1, Team Step 1 Nitrification2011-10-17 18:56:06 CDTGO:0004497 monooxygenase activity (F)PMID:16349014ECO:0000314 direct assay evidence used in manual assertion

Table 1

challenge

Pages in category "Team Step 1 Nitrification"

The following 3 pages are in this category, out of 3 total.


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