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Category:Team NDSU Bisons

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StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptableYERE8:A1JSP4BISON, Team NDSU Bisons2011-11-02 13:07:41 CDTGO:0010628 positive regulation of gene expression (P)PMID:16404569ECO:0000270 expression pattern evidence used in manual assertion

Table 3: FliA regulated genes include acrE, aceF, lpdA, eno, pflB, and adh.

challenge
acceptableECOLI:RCSBBISON2, Team NDSU Bisons2011-11-01 16:06:35 CDTGO:0031346 positive regulation of cell projection organization (P)PMID:17644608ECO:0000315 mutant phenotype evidence used in manual assertion

Fig. 2: RcsB enhances piliation. The rcsB mutant has fewer pili in the TEM

challenge
updatedbyinstructorECOLI:RCSBBISON2, Team NDSU Bisons2011-11-01 12:31:22 CDTGO:0044011 single-species biofilm formation on inanimate substrate (P)PMID:14651646ECO:0000315 mutant phenotype evidence used in manual assertion

Fig. 1: RcsC is required for biofilm formation, the mutant was complemented with a plasmid containing the rcsC gene and another one that contained a mutation in the rcsC gene

challenge
requireschangesECOLI:NTRBBISON, Team NDSU Bisons2011-10-05 13:07:06 CDTGO:0009242 colanic acid biosynthetic process (P)PMID:18578884ECO:0000317 genomic context evidence used in manual assertion

Tables 4 and 5 from 18578884 (Denton et al., 2008) describe the computational analysis of a data set from Oshima et al (12366850). Many of the genes of the colanic acid operon (wca) are regulated by this protein.

challenge
requireschangesECOLI:UVRYBISON, Team NDSU Bisons2011-10-05 13:05:32 CDTGO:0009242 colanic acid biosynthetic process (P)PMID:18578884ECO:0000317 genomic context evidence used in manual assertion

Tables 4 and 5 from 18578884 (Denton et al., 2008) describe the computational analysis of a data set from Oshima et al (12366850). Many of the genes of the colanic acid operon (wca) are regulated by this protein.

challenge
requireschangesECOLI:BASSBISON, Team NDSU Bisons2011-10-05 12:56:52 CDTGO:0009242 colanic acid biosynthetic process (P)PMID:18578884ECO:0000317 genomic context evidence used in manual assertion

Tables 4 and 5 from 18578884 (Denton et al., 2008) describe the computational analysis of a data set from Oshima et al (12366850). Many of the genes of the colanic acid operon (wca) are regulated by this protein.

challenge
acceptableECOLI:PTABISON2, Team NDSU Bisons2011-09-23 13:12:28 CDTGO:0006083 acetate metabolic process (P)PMID:21941ECO:0000315 mutant phenotype evidence used in manual assertion

Fig 1: Showed decreased acetate production in mutant phenotype.

challenge
acceptableECOLI:ACKABISON2, Team NDSU Bisons2011-09-23 13:04:34 CDTGO:0044011 single-species biofilm formation on inanimate substrate (P)PMID:12753190ECO:0000315 mutant phenotype evidence used in manual assertion

Fig. 6: formation of microcolonies and pellicle

challenge
acceptableECOLI:ACKABISON2, Team NDSU Bisons2011-09-22 15:56:19 CDTGO:0006083 acetate metabolic process (P)PMID:21941ECO:0000315 mutant phenotype evidence used in manual assertion

Fig 1: showed decreased acetate production in the mutant phenotype.

challenge
requireschangesECO57:FLHCBISON, Team NDSU Bisons2011-09-22 09:35:36 CDTGO:0042710 biofilm formation (P)PMID:21498760ECO:0000315 mutant phenotype evidence used in manual assertion

Table 3, Figs. 2B and 3

challenge
acceptableECO57:FLHCBISON, Team NDSU Bisons2011-09-22 09:35:36 CDTGO:0051782 negative regulation of cell division (P)PMID:21498760ECO:0000315 mutant phenotype evidence used in manual assertion

Table 3 and Fig. 2A

challenge
requireschangesECOLI:NTRCBISON, Team NDSU Bisons2011-09-20 12:42:41 CDTGO:0042710 biofilm formation (P)PMID:18578884ECO:0000315 mutant phenotype evidence used in manual assertion

Fig. 8, quantitative biofilm assay

challenge
requireschangesECOLI:UVRYBISON, Team NDSU Bisons2011-09-20 12:41:03 CDTGO:0042710 biofilm formation (P)PMID:18578884ECO:0000315 mutant phenotype evidence used in manual assertion

Fig. 8, quantitative biofilm assay

challenge

Pages in category "Team NDSU Bisons"

The following 3 pages are in this category, out of 3 total.