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ECOLI:UVRY
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | uvrY (synonyms: yecB) | |
| Protein Name(s) | Response regulator UvrY | |
| External Links | ||
| UniProt | P0AED5 | |
| EMBL | M24615 U00096 AP009048 X05398 X03691 | |
| PIR | A26750 | |
| RefSeq | NP_416424.1 YP_490171.1 | |
| ProteinModelPortal | P0AED5 | |
| SMR | P0AED5 | |
| DIP | DIP-35922N | |
| IntAct | P0AED5 | |
| MINT | MINT-1243107 | |
| STRING | 511145.b1914 | |
| PaxDb | P0AED5 | |
| PRIDE | P0AED5 | |
| EnsemblBacteria | AAC74981 BAA15734 | |
| GeneID | 12932113 946424 | |
| KEGG | ecj:Y75_p1885 eco:b1914 | |
| PATRIC | 32119161 | |
| EchoBASE | EB1130 | |
| EcoGene | EG11140 | |
| eggNOG | COG2197 | |
| HOGENOM | HOG000034813 | |
| InParanoid | P0AED5 | |
| KO | K07689 | |
| OMA | VGEANCG | |
| OrthoDB | EOG69GZGV | |
| PhylomeDB | P0AED5 | |
| BioCyc | EcoCyc:EG11140-MONOMER ECOL316407:JW1899-MONOMER | |
| PRO | PR:P0AED5 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0AED5 | |
| GO | GO:0005737 GO:0003677 GO:0000156 GO:0003700 GO:0000160 GO:0006351 | |
| Gene3D | 1.10.10.10 | |
| InterPro | IPR011006 IPR016032 IPR001789 IPR000792 IPR011991 | |
| Pfam | PF00196 PF00072 | |
| PRINTS | PR00038 | |
| SMART | SM00421 SM00448 | |
| SUPFAM | SSF46894 SSF52172 | |
| PROSITE | PS00622 PS50043 PS50110 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000156 |
phosphorelay response regulator activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
| GO:0009242 |
colanic acid biosynthetic process |
ECO:0000317 |
|
P |
Tables 4 and 5 from 18578884 (Denton et al., 2008) describe the computational analysis of a data set from Oshima et al (12366850). Many of the genes of the colanic acid operon (wca) are regulated by this protein. |
complete | ||||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
| GO:0042710 |
biofilm formation |
ECO:0000315 |
P |
Fig. 8, quantitative biofilm assay |
complete | |||||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
incorrect (CACAO) |
GO:0005515 |
protein binding |
ECO:0000269 |
F |
This is a sample annotation. |
complete | ||||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Pernestig, AK et al. (2001) Identification of UvrY as the cognate response regulator for the BarA sensor kinase in Escherichia coli. J. Biol. Chem. 276 225-31 PubMed GONUTS page
- ↑ 2.0 2.1 Denton, AM et al. (2008) Relating gene expression data on two-component systems to functional annotations in Escherichia coli. BMC Bioinformatics 9 294 PubMed GONUTS page
- ↑ Oshima, T et al. (2002) Transcriptome analysis of all two-component regulatory system mutants of Escherichia coli K-12. Mol. Microbiol. 46 281-91 PubMed GONUTS page
- ↑ Rubinstein, MH (1976) A new granulation method for compressed tablets [proceedings]. J. Pharm. Pharmacol. 28 Suppl 67P PubMed GONUTS page
