GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOLI:NTRC
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | glnG (synonyms: glnT, ntrC) | |
Protein Name(s) | Nitrogen regulation protein NR(I) | |
External Links | ||
UniProt | P0AFB8 | |
EMBL | X05173 L19201 U00096 AP009048 D16509 | |
PIR | B30377 | |
RefSeq | NP_418304.1 YP_491582.1 | |
ProteinModelPortal | P0AFB8 | |
SMR | P0AFB8 | |
DIP | DIP-9781N | |
IntAct | P0AFB8 | |
STRING | 511145.b3868 | |
EnsemblBacteria | AAC76865 BAE77441 | |
GeneID | 12933634 948361 | |
KEGG | ecj:Y75_p3318 eco:b3868 | |
PATRIC | 32123239 | |
EchoBASE | EB0380 | |
EcoGene | EG10385 | |
eggNOG | COG2204 | |
HOGENOM | HOG000058489 | |
InParanoid | P0AFB8 | |
KO | K07712 | |
OMA | FTGANQI | |
OrthoDB | EOG6WHNMG | |
PhylomeDB | P0AFB8 | |
BioCyc | EcoCyc:PROTEIN-NRI ECOL316407:JW3839-MONOMER | |
PRO | PR:P0AFB8 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P0AFB8 | |
GO | GO:0005524 GO:0000156 GO:0043565 GO:0042710 GO:0009399 GO:0006808 GO:0006355 GO:0006351 | |
Gene3D | 1.10.10.60 3.40.50.300 | |
InterPro | IPR003593 IPR011006 IPR009057 IPR002197 IPR027417 IPR010114 IPR001789 IPR002078 IPR025662 IPR025943 IPR025944 | |
Pfam | PF02954 PF00072 PF00158 | |
PRINTS | PR01590 | |
SMART | SM00382 SM00448 | |
SUPFAM | SSF46689 SSF52172 SSF52540 | |
TIGRFAMs | TIGR01818 | |
PROSITE | PS50110 PS00675 PS00676 PS00688 PS50045 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000156 |
phosphorelay response regulator activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006808 |
regulation of nitrogen utilization |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009399 |
nitrogen fixation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
GO:0042710 |
biofilm formation |
ECO:0000315 |
P |
Fig. 8, quantitative biofilm assay |
complete | |||||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Zhang, N et al. (2007) Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Proteomics 7 484-93 PubMed GONUTS page
- ↑ Denton, AM et al. (2008) Relating gene expression data on two-component systems to functional annotations in Escherichia coli. BMC Bioinformatics 9 294 PubMed GONUTS page