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From GONUTS

GONUTS is a Gene Ontology Normal Usage Tracking System.

The GONUTS wiki has been set up to provide third-party documentation for users of the Gene Ontology Project. The GO wiki is not an official product of the GO consortium. It was built by users at TAMU for newcomers to GO who want to explore GO usage. The rationale for this wiki is described in About GONUTS.

To enter the ontology pages, go to the GO page, or search for a term*. For more information about how this wiki is automatically updated, see GO wiki scripts. For Help using the system, see Help:Contents, which is available in the navigation links from all pages.

• See Current events for what's new with the GONUTS wiki.
• Leave comments and suggestions on our Known Issues page.

Genomes currently covered by GONUTS Saccharomyces cerevisiae from SGD Dictyostelium discoideum from dictyBase Caenorhabditis elegans from WormBase Drosophila melanogaster from FlyBase Mus musculus from MGI Danio rerio from ZFIN Arabidopsis thaliana from TAIR Schizosaccharomyces pombe from [http://] Gallus gallus from AgBase more coming... For GO terms being considered for obsoletion, see Category:GO:Proposed for obsoletion

GO News Feed news4go: Special Report: The GO Reference Genome Project - A Unified Framework for Functional Annotation across Species http://tinyurl.com/mrs6rx (Read more) news4go: New papers in GO Bibliography http://tinyurl.com/lscd4s (Read more) news4go: GO News site maintenance tomorrow http://tinyurl.com/lz4w43 (Read more) news4go: OBO-Edit 2.0 Official Release Available for download http://tinyurl.com/pp3pm8 (Read more) news4go: New post: Launch of the Renal Gene Ontology Annotation Initiative http://tinyurl.com/oos85r (Read more) news4go: New post: 40 million annotations for GOA! http://tinyurl.com/o66rk5 (Read more) news4go: New post: Inter-ontology regulation links now live http://tinyurl.com/osnwaj (Read more) news4go: New post: GO flat file format to be retired http://tinyurl.com/pln2u3 (Read more) news4go: New post: Special issue of BMC Microbiology for the PAMGO Consortium http://tinyurl.com/q86ren (Read more) news4go: New post: GO News is launched! http://tinyurl.com/pwxswj (Read more)

Searching GONUTS

• Enter some keywords into the search box on the left...the wiki will look for matches in the GO terms or in the commentary. By default we search in the Categories, which is where the GO terms are, and in the Articles, which includes pages on genes from different organisms.
• Or go to the Special:Search page, where you can set which namespaces are searched.

Joining GONUTS

GONUTS is currently set up so anyone can view or search, but only registered users can edit or add pages. Currently registered users can create new users, and we are working to add at least one registered user for each participating database (So far we have registered users at EcoliHub, EcoCyc, GOA, BeeBase, SGD, dictyBase, FlyBase, WormBase, TAIR, Rat Genome Database, ZFIN, MGI and AgBase .. please edit this if I forgot you!)

Feel free to email Daniel or Jim with account questions or requests.