User:Schlangj

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
unacceptable	?	2014-04-05 12:52:10 CDT	GO:0008218 bioluminescence (Figure 3 shows the LuxR levels increase as the OD increases. This shows the connection between LuxR and high cell density. This implies that bioluminescence occurs when other organisms are present near by, verses when the surrounding area has low cell density.)	PMID:23204455	IDA: Inferred from Direct Assay		challenge
unacceptable	ECOLX:ROP	2014-04-05 12:59:20 CDT	GO:0017028 protein stabilization activity (F)	PMID:18247355	ECO:0000314 direct assay evidence used in manual assertion	Figure 3 shows that RNAI-RNAII dissociation is faster without the presence of Rop	challenge
unacceptable	BPHK0:RPC3	2014-04-06 10:43:17 CDT	GO:0019043 establishment of viral latency (P)	PMID:17426811	ECO:0000314 direct assay evidence used in manual assertion	Figure 5 shows that the levels of CII increase as the levels of CIII increase, which demonstrates that CIII can stabilize CII which then activates CI in order to establish lysogeny	challenge
unacceptable	LAMBD:RPC2	2014-04-06 11:02:17 CDT	GO:0016563 transcription activator activity (F)	PMID:18298445	ECO:0000314 direct assay evidence used in manual assertion	figure 2B shows the up regulation of CII as a heat shock response, which occurs so that transcription of CI can be activated and the cell can enter the lysogeny pathway	challenge
unacceptable	LAMBD:RPC1	2014-04-06 11:13:58 CDT	GO:0017053 transcriptional repressor complex (C)	PMID:23853547	ECO:0000314 direct assay evidence used in manual assertion	Figure 5 shows that there is a direct relationship between DNA looping and CI levels. This demonstrates how CI is a repressor protein.	challenge
unacceptable	VIBHA:LUXO	2014-04-06 11:30:42 CDT	GO:0008218 bioluminescence (P)	PMID:24698180	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2 shows the LuxO is a bioluminescence repressor, by looking at a mutant that always has LuxO activated, and therefore bioluminescence does not occur.	challenge

acceptable:0
unacceptable:6
requires_changes:0
flagged:0

Annotations challenged by Schlangj

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
unacceptable	Djgulizia, Team Texas Aggies	HUMAN:GOLP3	GO:0005794 - Golgi apparatus (C)	PMID:18410729	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 2
unacceptable	Rthompson, Team Bfast Taco	HUMAN:PEPA5	GO:0006508 - proteolysis (P)	other:PMC1712889	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 3
unacceptable	Rthompson, Team Bfast Taco	HUMAN:OPSD	GO:0071482 - cellular response to light stimulus (P)	PMID:8643442	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 4
unacceptable	Chong, Team Kitten Me Right Meow	MOUSE:5HT2B	GO:0008144 - obsolete drug binding (F)	PMID:16940156	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 2
updatedbyinstructor	Kemmy, Team GladSue	CHLRE:F6LJD1	GO:1902326 - positive regulation of chlorophyll biosynthetic process (P)	PMID:21527423	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 1

0 annotations fixed by Schlangj

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