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User:Kemmy

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CACAO Spring 2014

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
unacceptableHUMAN:TERT2014-02-25 01:48:29 CSTGO:0006915 apoptotic process (P)PMID:23326372ECO:0000314 direct assay evidence used in manual assertion

Nuclear localization of telomerase is correlated with higher amounts of DNA damage and apoptosis. (refer to Figure 2)

challenge
unacceptableHUMAN:TERT2014-02-26 14:47:14 CSTGO:0060218 hematopoietic stem cell differentiation (P)PMID:23585473ECO:0000315 mutant phenotype evidence used in manual assertion

Telomerase-mutant ipscs caused impaired hematopoietic differentiation in vitro. Ref to figure 6

challenge
unacceptableHUMAN:CDC202014-02-26 15:56:12 CSTGO:0010467 gene expression (P)PMID:24551295ECO:0000314 direct assay evidence used in manual assertion

There is upregulation of CDC20 mRNA in cancerous tissues than in noncancerous tissues (ref. figure 1). This upregulation of CDC20 is also associated with aggressive progression and poor prognosis in gastric cancer. (ref. figure 3).

challenge
updatedbyinstructorHUMAN:G45IP2014-02-27 08:47:58 CSTGO:0071850 mitotic cell cycle arrest (P)PMID:24520316ECO:0000314 direct assay evidence used in manual assertion

CRIF1 overexpression increased the proportion of jurkat cells arrested in G0/G1 while endogenous depletion decreased cell cycle arrest. (refer to Figure 3)

challenge
updatedbyinstructorCHLRE:F6LJD12014-02-27 10:01:17 CSTGO:1902326 positive regulation of chlorophyll biosynthetic process (P)PMID:21527423ECO:0000315 mutant phenotype evidence used in manual assertion

CIA6 mutant increased chlorophyll content per cell. (refer to Figure 8)

challenge
unacceptableHUMAN:ZBT162014-03-02 15:14:07 CSTGO:0016604 nuclear body (C)PMID:24359566ECO:0000316 genetic interaction evidence used in manual assertion

Cellular localization of Znf179 was changed from cytoplasm to nucleus when PLZf was co-expressed. (Refer to Figure 4)

challenge

acceptable:0
unacceptable:4
requires_changes:0
flagged:0

Annotations challenged by Kemmy

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
acceptableJk,
Team IREMAI
CAMDR:PGRP1GO:0001818 - negative regulation of cytokine production (P)PMID:23326499ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

0 annotations fixed by Kemmy

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