User:Portisja

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
acceptable	ENTHI:Q9U7F6	2012-04-15 11:17:34 CDT	GO:0032509 endosome transport via multivesicular body sorting pathway (P)	PMID:22500103	ECO:0000314 direct assay evidence used in manual assertion	Figure 6 shows antibody tagged EhADH112 localizing along the MVB membrane after the introduction of RBC	challenge
acceptable	MOUSE:GLI1	2012-04-15 12:25:22 CDT	GO:0045667 regulation of osteoblast differentiation (P)	PMID:22493482	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2 shows how osteoblast differentiation is altered by defects in Gli1.	challenge
acceptable	MOUSE:KLF4	2012-04-15 12:42:59 CDT	GO:0030336 negative regulation of cell migration (P)	PMID:22491752	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4 shows that knock-out of the KLF4 gene results in increased cell migration.	challenge
requireschanges	HUMAN:Q9BXH2	2012-04-15 13:18:37 CDT	GO:0045605 negative regulation of epidermal cell differentiation (P)	PMID:22417306	ECO:0000314 direct assay evidence used in manual assertion	Figure 4 shows that knock-down of STAT3 expression triggers cell differentiation.	challenge
acceptable	MOUSE:ETS1	2012-04-15 13:37:41 CDT	GO:0050728 negative regulation of inflammatory response (P)	PMID:22294049	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4 shows that mutants of the ETS1 gene have increased protein levels of the proteins secreted during inflammatory response.	challenge
acceptable	MOUSE:ATF3	2012-04-15 14:07:57 CDT	GO:0070373 negative regulation of ERK1 and ERK2 cascade (P)	PMID:22053207	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4 shows the relative protein levels of proteins produced in the ERK cascade after the ATF3 gene has been knocked out as compared to the wild type gene expression.	challenge
requireschanges	AGGAC:D4EB47	2012-04-15 14:50:39 CDT	GO:1900192 positive regulation of single-species biofilm formation (Figure 1 shows a large decrease in biofilm area and depth after the expression of QseC is repressed.)	PMID:20404080	IMP: Inferred from Mutant Phenotype		challenge
requireschanges	SALTY:E7UUT8	2012-04-15 15:08:23 CDT	GO:2000154 negative regulation of flagellar cell motility (Figure 2 shows relative motility levels of the WT and a QseC mutant.)	PMID:20227482	IMP: Inferred from Mutant Phenotype		challenge
requireschanges	EDWTA:E3UKS8	2012-04-15 15:17:22 CDT	GO:2000154 negative regulation of flagellar cell motility (P)	PMID:21288493	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2 shows a motility assay for the WT and QseBC deletion mutants.	challenge
acceptable	EDWTA:E3UKS8	2012-04-15 15:17:22 CDT	GO:0009405 pathogenesis (P)	PMID:21288493	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4 shows a survival curve for WT and deletion mutants.	challenge

acceptable:6
unacceptable:0
requires_changes:4
flagged:0

Annotations challenged by Portisja

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
requireschanges	Beebeje1, Team Gene Queens	STAAU:ARSC	GO:0055114 - obsolete oxidation-reduction process (P)	PMID:1409657	ECO:0000316 genetic interaction evidence used in manual assertion	challenge	C: 1
acceptable	Chrispond, Team Big Mama 50000	ECOLI:PUTA	GO:0004657 - proline dehydrogenase activity (F)	PMID:22040654	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 1
acceptable	Ewillis, Team Bazinga	HUMAN:CDC5L	GO:0005737 - cytoplasm (C)	PMID:9038199	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 1

0 annotations fixed by Portisja

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links

acceptable:0
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by Portisja

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
requireschanges	Beebeje1, Team Gene Queens	STAAU:ARSC	GO:0055114 - obsolete oxidation-reduction process (P)	PMID:1409657	ECO:0000316 genetic interaction evidence used in manual assertion	challenge	C: 1

0 annotations fixed by Portisja