User:Kjlawson

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
updatedbyinstructor	HUMAN:KPCD	2013-09-26 12:29:27 CDT	GO:0032956 regulation of actin cytoskeleton organization (P)	PMID:22554282	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4D	challenge
updatedbyinstructor	HUMAN:MATR3	2013-10-11 15:09:55 CDT	GO:0010608 posttranscriptional regulation of gene expression (P)	PMID:21771347	ECO:0000314 direct assay evidence used in manual assertion	Figure 1, 2	challenge
unacceptable	HUMAN:MATR3	2013-10-26 18:38:42 CDT	GO:0010608 posttranscriptional regulation of gene expression (P)	PMID:21771347	ECO:0000314 direct assay evidence used in manual assertion	Figure 3: western blot analysis of anti-HA antibodies shows interaction of Rev and Matrin 3 proteins (lane 8; upper panel)	challenge
unacceptable	HUMAN:CDK9	2013-10-26 19:08:36 CDT	GO:0001221 transcription cofactor binding (F)	PMID:9557739	ECO:0000314 direct assay evidence used in manual assertion	Figure 1b: FLAG tagged PITALRE protein bound to Tat protein complex, discerned with antibody binding	challenge
unacceptable	HUMAN:RT29	2013-11-09 18:42:20 CST	GO:0010941 regulation of cell death (P)	PMID:18227431	ECO:0000314 direct assay evidence used in manual assertion	Figure 1. Anti-DAP3 and anti-phosphoserine antibody tags in Western blot; arrows marking points of convergent tagging	challenge
unacceptable	MYCTU:FTSZ	2013-11-09 18:51:17 CST	GO:0022607 cellular component assembly (P)	PMID:18436955	ECO:0000314 direct assay evidence used in manual assertion	Figure 2. Hg2Cl chelation of Cysteine residue impedes protein function and causes aggregation	challenge
unacceptable	BACSU:SIGA	2013-11-10 13:15:39 CST	GO:0016987 sigma factor activity (F)	PMID:19735077	ECO:0000314 direct assay evidence used in manual assertion	Figure 4. Far-Western blotting of sigA with bacterial RNA polymerase, compared to sigA mutant strains	challenge
unacceptable	LISMN:Q6E8U6	2013-11-10 14:40:04 CST	GO:0009405 pathogenesis (P)	PMID:19472336	ECO:0000314 direct assay evidence used in manual assertion	Figure 4. Sheep erythrocytes treated with both known immunotoxin and suspected cytotoxic LLC to compare effects on cell death	challenge
requireschanges	PSEAI:P95429	2013-11-10 14:57:46 CST	GO:0003677 DNA binding (F)	PMID:19235906	ECO:0000255 match to sequence model evidence used in manual assertion	Figure 2. Superposition and comparison with suspected binding protein and known DNA binding protein subdomains	challenge

acceptable:0
unacceptable:6
requires_changes:1
flagged:0

Annotations challenged by Kjlawson

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
updatedbyinstructor	Atruchon, Team Hu Ville	RALSO:Q8XZS6	GO:0033320 - UDP-D-xylose biosynthetic process (P)	PMID:20118241	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 5 fixed by Roosheel
unacceptable	Dewinter, Team Hot Cold	VIBF1:Q5E5B9	GO:0004177 - aminopeptidase activity (F)	PMID:22636772	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 2
updatedbyinstructor	Cpandrews, Team Ecoli	ARATH:I1VCA5	GO:0005783 - endoplasmic reticulum (C)	PMID:22430844	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 4 fixed by Sabrinamoisan

0 annotations fixed by Kjlawson

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