BACSU:SIGA

Species (Taxon ID)	Bacillus subtilis (strain 168). (224308)
Gene Name(s)	sigA (ECO:0000255 with HAMAP-Rule:MF_00963) (synonyms: rpoD)
Protein Name(s)	RNA polymerase sigma factor SigA (ECO:0000255 with HAMAP-Rule:MF_00963) Sigma-43 Sigma-A
External Links
UniProt	P06224
EMBL	M10089 X03897 D84432 AL009126 J05569
PIR	A22626
RefSeq	NP_390399.2
ProteinModelPortal	P06224
SMR	P06224
IntAct	P06224
STRING	224308.BSU25200
PaxDb	P06224
EnsemblBacteria	CAB14450
GeneID	937897
KEGG	bsu:BSU25200
PATRIC	18976878
GenoList	BSU25200
eggNOG	COG0568
HOGENOM	HOG000270273
InParanoid	P06224
KO	K03086
OMA	DKYLHEI
OrthoDB	EOG6XHC70
PhylomeDB	P06224
BioCyc	BSUB:BSU25200-MONOMER
Proteomes	UP000001570
GO	GO:0005737 GO:0003677 GO:0003700 GO:0016987 GO:0001123
Gene3D	1.10.10.10
HAMAP	MF_00963
InterPro	IPR014284 IPR000943 IPR009042 IPR007627 IPR007624 IPR007630 IPR007127 IPR013325 IPR013324 IPR012760 IPR028630 IPR011991
Pfam	PF03979 PF00140 PF04542 PF04539 PF04545
PRINTS	PR00046
SUPFAM	SSF88659 SSF88946
TIGRFAMs	TIGR02393 TIGR02937
PROSITE	PS00715 PS00716

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0016987	sigma factor activity	PMID:19735077	ECO:0000314			F		Figure 4. Far-Western blotting of sigA with bacterial RNA polymerase, compared to sigA mutant strains	complete CACAO 9117
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR007127 InterPro:IPR009042 InterPro:IPR012760	F		Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000943 InterPro:IPR007624 InterPro:IPR007627 InterPro:IPR007630 InterPro:IPR009042 InterPro:IPR013325 InterPro:IPR014284	F		Seeded From UniProt	complete
involved_in	GO:0006352	DNA-templated transcription, initiation	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000943 InterPro:IPR007624 InterPro:IPR007627 InterPro:IPR007630 InterPro:IPR009042 InterPro:IPR012760 InterPro:IPR013325 InterPro:IPR014284 InterPro:IPR028630	P		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000943 InterPro:IPR007127 InterPro:IPR007624 InterPro:IPR007627 InterPro:IPR007630 InterPro:IPR009042 InterPro:IPR012760 InterPro:IPR013325 InterPro:IPR014284	P		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR009042 InterPro:IPR012760 InterPro:IPR028630	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	F		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	C		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	F		Seeded From UniProt	complete
involved_in	GO:0001123	transcription initiation from bacterial-type RNA polymerase promoter	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	P		Seeded From UniProt	complete
involved_in	GO:0010468	regulation of gene expression	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000184638	P		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0731	P		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0731	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
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References

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