User:Ganesani

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
requireschanges	ECOLI:RP54	2012-04-10 11:14:44 CDT	GO:0006355 regulation of transcription, DNA-dependent (P)	PMID:21219458	ECO:0000270 expression pattern evidence used in manual assertion	Fig. 4: The expression of motility genes fliA, flhC and flhD genes are reduced in rpoN mutants compared to wild type E. coli.	challenge
requireschanges	THEAC:G3LGQ3	2012-04-10 15:44:45 CDT	GO:0050034 L-rhamnose 1-dehydrogenase activity (F)	PMID:22481639	ECO:0000314 direct assay evidence used in manual assertion	Table 1: enzyme assay shows L-rhamnose activity	challenge
acceptable	9SPHN:Q0KJL5	2012-04-10 15:57:13 CDT	GO:0016787 hydrolase activity (F)	PMID:22475079	ECO:0000314 direct assay evidence used in manual assertion	Fig. 5: pH-rate profile for synthesis of PDC shows hydrolase activity of LigI.	challenge
acceptable	ENTHI:Q58P26	2012-04-10 20:14:10 CDT	GO:0004586 ornithine decarboxylase activity (F)	PMID:22389745	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 10: the four ODC mutants show significantly reduced enzyme activity compared to the wild type ODC.	challenge
acceptable	BACPU:F8SVM6	2012-04-10 20:46:12 CDT	GO:0036374 glutathione hydrolase activity (F)	PMID:22305170	ECO:0000314 direct assay evidence used in manual assertion	Fig. 6: E. coli transformed with GGTBP show gamma-glutamyltransferase activity using many different amino acids acceptors.	challenge
requireschanges	PICAD:E7R969	2012-04-10 21:15:38 CDT	GO:0004022 alcohol dehydrogenase (NAD) activity (Fig. 3C: ADH activity is significantly higher in the wild type strain than in the deletion mutant. )	PMID:20635082	IMP: Inferred from Mutant Phenotype		challenge
acceptable	HUMAN:S39A4	2012-04-12 21:43:15 CDT	GO:0005385 zinc ion transmembrane transporter activity (F)	PMID:22242765	ECO:0000314 direct assay evidence used in manual assertion	Fig. 2A: Frog oocytes injected with human ZIP4 mRNA showed significant zinc ion uptake activity compared to a negative control.	challenge
requireschanges	BORBR:Q7TTE5	2012-04-13 16:58:23 CDT	GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (F)	PMID:22214383	ECO:0000314 direct assay evidence used in manual assertion	Fig. 2 shows maleamate hydrolysis activity	challenge

acceptable:4
unacceptable:0
requires_changes:4
flagged:0

Annotations challenged by Ganesani

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
requireschanges	Abdull31, Team Interior Nebulas	CLOAB:CRT	GO:0003859 - obsolete (3R)-3-hydroxybutyryl-CoA dehydratase activity (F)	PMID:18060402	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 1
requireschanges	Kr004966, Team Francis Crick	ECOLI:FTSZ	GO:0000910 - cytokinesis (P)	PMID:8917533	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 2
requireschanges	Th849858, Team Edward Jenner	ECOLX:Q52R31	GO:0005525 - GTP binding (F)	PMID:1528267	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 1
requireschanges	Mi896236, Team Stanley Cohen	LACCA:GAL1	GO:0004335 - galactokinase activity (F)	PMID:9603808	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 1

0 annotations fixed by Ganesani

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
requireschanges	ECOLI:RPOS	2012-03-27 20:06:06 CDT	GO:0045809 positive regulation of establishment of competence for transformation (P)	PMID:22438941	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4A shows the transformation frequency was greater in the rpoS+ strain than in the rpoS- strain at similar optimal culture densities.	challenge

acceptable:0
unacceptable:0
requires_changes:1
flagged:0

Annotations challenged by Ganesani

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
requireschanges	Abdull31, Team Interior Nebulas	CLOAB:CRT	GO:0003859 - obsolete (3R)-3-hydroxybutyryl-CoA dehydratase activity (F)	PMID:18060402	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 1

0 annotations fixed by Ganesani