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HUMAN:HIF1A
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | HIF1A (synonyms: BHLHE78, MOP1, PASD8) | |
Protein Name(s) | Hypoxia-inducible factor 1-alpha
HIF-1-alpha HIF1-alpha ARNT-interacting protein Basic-helix-loop-helix-PAS protein MOP1 Class E basic helix-loop-helix protein 78 bHLHe78 Member of PAS protein 1 PAS domain-containing protein 8 | |
External Links | ||
UniProt | Q16665 | |
EMBL | U22431 U29165 AF050127 AF050115 AF050116 AF050117 AF050118 AF050119 AF050120 AF050121 AF050122 AF050123 AF050124 AF050125 AF050126 FJ790247 AF207601 AF207602 AF208487 AF304431 AB073325 BT009776 AL137129 BC012527 | |
CCDS | CCDS58324.1 CCDS9753.1 CCDS9754.1 | |
PIR | I38972 | |
RefSeq | NP_001230013.1 NP_001521.1 NP_851397.1 | |
UniGene | Hs.597216 Hs.719495 | |
PDB | 1D7G 1H2K 1H2L 1H2M 1L3E 1L8C 1LM8 1LQB 2ILM 3HQR 3HQU 4AJY 4H6J | |
PDBsum | 1D7G 1H2K 1H2L 1H2M 1L3E 1L8C 1LM8 1LQB 2ILM 3HQR 3HQU 4AJY 4H6J | |
DisProt | DP00262 | |
ProteinModelPortal | Q16665 | |
SMR | Q16665 | |
BioGrid | 109338 | |
DIP | DIP-29722N | |
IntAct | Q16665 | |
MINT | MINT-133270 | |
STRING | 9606.ENSP00000338018 | |
BindingDB | Q16665 | |
ChEMBL | CHEMBL2221345 | |
DrugBank | DB01136 | |
PhosphoSite | Q16665 | |
DMDM | 2498017 | |
MaxQB | Q16665 | |
PaxDb | Q16665 | |
PRIDE | Q16665 | |
DNASU | 3091 | |
Ensembl | ENST00000323441 ENST00000337138 ENST00000539097 | |
GeneID | 3091 | |
KEGG | hsa:3091 | |
UCSC | uc001xfq.2 uc021rua.1 | |
CTD | 3091 | |
GeneCards | GC14P062162 | |
HGNC | HGNC:4910 | |
HPA | CAB017442 HPA001275 | |
MIM | 603348 | |
neXtProt | NX_Q16665 | |
PharmGKB | PA29283 | |
eggNOG | NOG289264 | |
GeneTree | ENSGT00760000118788 | |
HOGENOM | HOG000234306 | |
HOVERGEN | HBG060456 | |
InParanoid | Q16665 | |
KO | K08268 | |
OMA | QNAQRKR | |
OrthoDB | EOG7JDQX8 | |
PhylomeDB | Q16665 | |
TreeFam | TF317772 | |
Reactome | REACT_118780 REACT_120916 REACT_121092 REACT_121226 REACT_24941 | |
SignaLink | Q16665 | |
ChiTaRS | HIF1A | |
EvolutionaryTrace | Q16665 | |
GeneWiki | HIF1A | |
GenomeRNAi | 3091 | |
NextBio | 12265 | |
PRO | PR:Q16665 | |
Proteomes | UP000005640 | |
Bgee | Q16665 | |
CleanEx | HS_HIF1A | |
ExpressionAtlas | Q16665 | |
Genevestigator | Q16665 | |
GO | GO:0005737 GO:0005829 GO:0031514 GO:0005730 GO:0005654 GO:0005634 GO:0090575 GO:0005667 GO:0019899 GO:0035035 GO:0051879 GO:0035257 GO:0046982 GO:0019901 GO:0001077 GO:0003705 GO:0001076 GO:0043565 GO:0003700 GO:0004871 GO:0008134 GO:0000989 GO:0031625 GO:0001525 GO:0019896 GO:0001922 GO:0003208 GO:0051216 GO:0006879 GO:0071456 GO:0071347 GO:0021987 GO:0032963 GO:0002248 GO:0048546 GO:0071542 GO:0051541 GO:0035162 GO:0001892 GO:0061030 GO:0001837 GO:0042593 GO:0001947 GO:0042541 GO:0060574 GO:0006089 GO:0007595 GO:0042789 GO:0046716 GO:0030502 GO:0045926 GO:2001054 GO:1903377 GO:0070244 GO:0032007 GO:0001755 GO:0021502 GO:0007219 GO:0003151 GO:0032364 GO:0045766 GO:0032722 GO:0070101 GO:0001938 GO:0010634 GO:0045648 GO:0045821 GO:0046886 GO:0035774 GO:0002052 GO:0051000 GO:0010870 GO:0045944 GO:0061419 GO:0045893 GO:0030949 GO:0010575 GO:0010468 GO:0061418 GO:0043619 GO:0006355 GO:0032909 GO:0001666 GO:0014850 GO:0061298 GO:0007165 GO:0010573 GO:0008542 | |
InterPro | IPR011598 IPR001321 IPR014887 IPR021537 IPR001610 IPR000014 IPR013767 | |
Pfam | PF11413 PF08778 PF00989 | |
PRINTS | PR01080 | |
SMART | SM00353 SM00086 SM00091 | |
SUPFAM | SSF47459 SSF55785 | |
TIGRFAMs | TIGR00229 | |
PROSITE | PS50888 PS50112 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0071456 |
ECO:0000314 |
Figure 2 shows the increase in lactate production with hypoxia by lactate dehydrogenase in comparison to normoxia. |
complete | |||||||
GO:0071456 |
cellular response to hypoxia |
ECO:0000270 |
P |
Figure 1 |
complete | |||||
GO:0010508 |
positive regulation of autophagy |
ECO:0000315 |
P |
Fig 5. When HIF-1α is knockdown, LC3B cleavage, a well characterized marker for autophagy, is reduced in response to doxorubicin and daunorubicin. |
complete | |||||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000255 |
match to sequence model evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:1902895 |
positive regulation of pri-miRNA transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
coincident_with:(ENSEMBL:ENSG00000199038) |
Seeded From UniProt |
complete | ||
enables |
GO:0000977 |
RNA polymerase II regulatory region sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(ENSEMBL:ENSG00000199038) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(ENSEMBL:ENSG00000199038) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1902895 |
positive regulation of pri-miRNA transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0005556 |
multiple sequence alignment evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0019904 |
protein domain specific binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0002039 |
p53 binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043536 |
positive regulation of blood vessel endothelial cell migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0010629 |
negative regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0045766 |
positive regulation of angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0000071) |
Seeded From UniProt |
complete | ||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010039 |
response to iron ion |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
GO:0001666 |
response to hypoxia |
ECO:0000314 |
P |
Fig 1A as hypoxia occurs, levels of HIF-1alpha increase |
complete | |||||
involved_in |
GO:0006366 |
transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045766 |
positive regulation of angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:1902895 |
positive regulation of pri-miRNA transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0016607 |
nuclear speck |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0090575 |
RNA polymerase II transcription factor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0090575 |
RNA polymerase II transcription factor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1903377 |
negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071347 |
cellular response to interleukin-1 |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070101 |
positive regulation of chemokine-mediated signaling pathway |
ECO:0000305 |
curator inference used in manual assertion |
GO:0010870 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061419 |
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:Q9H4X1) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061419 |
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0051879 |
Hsp90 protein binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051541 |
elastin metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046886 |
positive regulation of hormone biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045821 |
positive regulation of glycolytic process |
ECO:0000305 |
curator inference used in manual assertion |
GO:0043619 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045766 |
positive regulation of angiogenesis |
ECO:0000305 |
curator inference used in manual assertion |
GO:0010575 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045648 |
positive regulation of erythrocyte differentiation |
ECO:0000305 |
curator inference used in manual assertion |
GO:0046886 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043619 |
regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043619 |
regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
contributes_to |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
contributes_to |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
contributes_to |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042789 |
mRNA transcription by RNA polymerase II |
ECO:0000305 |
curator inference used in manual assertion |
GO:0000981 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032963 |
collagen metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032909 |
regulation of transforming growth factor beta2 production |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030949 |
positive regulation of vascular endothelial growth factor receptor signaling pathway |
ECO:0000305 |
curator inference used in manual assertion |
GO:0010573 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030949 |
positive regulation of vascular endothelial growth factor receptor signaling pathway |
ECO:0000305 |
curator inference used in manual assertion |
GO:0010575 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010870 |
positive regulation of receptor biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010634 |
positive regulation of epithelial cell migration |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010575 |
positive regulation of vascular endothelial growth factor production |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010573 |
vascular endothelial growth factor production |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007165 |
signal transduction |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
contributes_to |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0000165) |
Seeded From UniProt |
complete | ||
contributes_to |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0000165) |
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0000165) |
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0000165) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002248 |
connective tissue replacement involved in inflammatory response wound healing |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001938 |
positive regulation of endothelial cell proliferation |
ECO:0000305 |
curator inference used in manual assertion |
GO:0010575 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001837 |
epithelial to mesenchymal transition |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032364 |
oxygen homeostasis |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0061419 |
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:Q99801) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035257 |
nuclear hormone receptor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035035 |
histone acetyltransferase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0019901 |
protein kinase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0019899 |
enzyme binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0019896 |
axonal transport of mitochondrion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010575 |
positive regulation of vascular endothelial growth factor production |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0039411 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0039411 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0004666 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:106918 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000353 |
physical interaction evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016604 |
nuclear body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:1904115 |
axon cytoplasm |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0019896 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A8P8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2001054 |
negative regulation of mesenchymal cell apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000378 |
negative regulation of reactive oxygen species metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1903715 |
regulation of aerobic respiration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1903599 |
positive regulation of autophagy of mitochondrion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0097411 |
hypoxia-inducible factor-1alpha signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071542 |
dopaminergic neuron differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0070888 |
E-box binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070244 |
negative regulation of thymocyte apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
GO:0001666 |
response to hypoxia |
ECO:0000315 |
P |
Figure 6. Shows a favoring of aerobic glycolysis in the immortalized lymphoblastoid cell lines (LCL) when compared to both CD40+IL4 activated cells and newly Epstein-Barr Virus-infected B-cells. In addition to the increased levels of lactate and pyruvate, increased ROS levels were found in LCL's in comparison to the CD40+IL4 and EBV B-Cell cell lines. |
complete | |||||
involved_in |
GO:0070243 |
regulation of thymocyte apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
GO:0005634 |
nucleus |
ECO:0000314 |
C |
Figure 4 |
complete | |||||
involved_in |
GO:0061298 |
retina vasculature development in camera-type eye |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061072 |
iris morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061030 |
epithelial cell differentiation involved in mammary gland alveolus development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060574 |
intestinal epithelial cell maturation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051541 |
elastin metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051216 |
cartilage development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050790 |
regulation of catalytic activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048593 |
camera-type eye morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048546 |
digestive tract morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048514 |
blood vessel morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046716 |
muscle cell cellular homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045926 |
negative regulation of growth |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045648 |
positive regulation of erythrocyte differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043619 |
regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043524 |
negative regulation of neuron apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043066 |
negative regulation of apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042826 |
histone deacetylase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042593 |
glucose homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042541 |
hemoglobin biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042127 |
regulation of cell population proliferation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035774 |
positive regulation of insulin secretion involved in cellular response to glucose stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035162 |
embryonic hemopoiesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032963 |
collagen metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032364 |
oxygen homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032007 |
negative regulation of TOR signaling |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031514 |
motile cilium |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030949 |
positive regulation of vascular endothelial growth factor receptor signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030502 |
negative regulation of bone mineralization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030279 |
negative regulation of ossification |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0021987 |
cerebral cortex development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0021502 |
neural fold elevation formation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0016607 |
nuclear speck |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016239 |
positive regulation of macroautophagy |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0014850 |
response to muscle activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010634 |
positive regulation of epithelial cell migration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010508 |
positive regulation of autophagy |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008542 |
visual learning |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007595 |
lactation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006879 |
cellular iron ion homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006110 |
regulation of glycolytic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006089 |
lactate metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0003208 |
cardiac ventricle morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0003151 |
outflow tract morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002248 |
connective tissue replacement involved in inflammatory response wound healing |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002052 |
positive regulation of neuroblast proliferation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001947 |
heart looping |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001944 |
vasculature development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001922 |
B-1 B cell homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001892 |
embryonic placenta development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001837 |
epithelial to mesenchymal transition |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001755 |
neural crest cell migration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001568 |
blood vessel development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q61221 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046983 |
protein dimerization activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051000 |
positive regulation of nitric-oxide synthase activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032722 |
positive regulation of chemokine production |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0061418 |
regulation of transcription from RNA polymerase II promoter in response to hypoxia |
Reactome:R-HSA-1234174 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043687 |
post-translational protein modification |
Reactome:R-HSA-597592 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019221 |
cytokine-mediated signaling pathway |
Reactome:R-HSA-6785807 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016579 |
protein deubiquitination |
Reactome:R-HSA-5688426 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016567 |
protein ubiquitination |
Reactome:R-HSA-8956106 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
Reactome:R-HSA-8956106 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-NUL-2065560 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016607 |
nuclear speck |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Sedoris, KC et al. (2010) Hypoxia induces differential translation of enolase/MBP-1. BMC Cancer 10 157 PubMed GONUTS page
- ↑ Sutter, CH et al. (2000) Hypoxia-inducible factor 1alpha protein expression is controlled by oxygen-regulated ubiquitination that is disrupted by deletions and missense mutations. Proc. Natl. Acad. Sci. U.S.A. 97 4748-53 PubMed GONUTS page
- ↑ Culver, C et al. (2011) HIF-1α depletion results in SP1-mediated cell cycle disruption and alters the cellular response to chemotherapeutic drugs. Cell Cycle 10 1249-60 PubMed GONUTS page
- ↑ 4.0 4.1 Vaquerizas, JM et al. (2009) A census of human transcription factors: function, expression and evolution. Nat. Rev. Genet. 10 252-63 PubMed GONUTS page
- ↑ Crosby, ME et al. (2009) MicroRNA regulation of DNA repair gene expression in hypoxic stress. Cancer Res. 69 1221-9 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 6.4 Huang, X et al. (2009) Hypoxia-inducible mir-210 regulates normoxic gene expression involved in tumor initiation. Mol. Cell 35 856-67 PubMed GONUTS page
- ↑ Gou, D et al. (2012) miR-210 has an antiapoptotic effect in pulmonary artery smooth muscle cells during hypoxia. Am. J. Physiol. Lung Cell Mol. Physiol. 303 L682-91 PubMed GONUTS page
- ↑ Ghosh, G et al. (2010) Hypoxia-induced microRNA-424 expression in human endothelial cells regulates HIF-α isoforms and promotes angiogenesis. J. Clin. Invest. 120 4141-54 PubMed GONUTS page
- ↑ 9.0 9.1 De Guzman, RN et al. (2004) Interaction of the TAZ1 domain of the CREB-binding protein with the activation domain of CITED2: regulation by competition between intrinsically unstructured ligands for non-identical binding sites. J. Biol. Chem. 279 3042-9 PubMed GONUTS page
- ↑ Sen, A et al. (2013) MicroRNA-138 regulates hypoxia-induced endothelial cell dysfunction by targeting S100A1. PLoS ONE 8 e78684 PubMed GONUTS page
- ↑ 11.0 11.1 Sánchez-Puig, N et al. (2005) Binding of natively unfolded HIF-1alpha ODD domain to p53. Mol. Cell 17 11-21 PubMed GONUTS page
- ↑ 12.0 12.1 12.2 Zhou, Y et al. (2016) Hydrogen sulfide promotes angiogenesis by downregulating miR-640 via the VEGFR2/mTOR pathway. Am. J. Physiol., Cell Physiol. 310 C305-17 PubMed GONUTS page
- ↑ 13.0 13.1 13.2 Li, B et al. (2014) Fructose-1,6-bisphosphatase opposes renal carcinoma progression. Nature 513 251-5 PubMed GONUTS page
- ↑ Mizukami, Y et al. (2004) ERK1/2 regulates intracellular ATP levels through alpha-enolase expression in cardiomyocytes exposed to ischemic hypoxia and reoxygenation. J. Biol. Chem. 279 50120-31 PubMed GONUTS page
- ↑ Miles, AL et al. (2017) The vacuolar-ATPase complex and assembly factors, TMEM199 and CCDC115, control HIF1α prolyl hydroxylation by regulating cellular iron levels. Elife 6 PubMed GONUTS page
- ↑ 16.0 16.1 16.2 16.3 Roy, A et al. (2013) Antidicer RNAse activity of monocyte chemotactic protein-induced protein-1 is critical for inducing angiogenesis. Am. J. Physiol., Cell Physiol. 305 C1021-32 PubMed GONUTS page
- ↑ Deng, S et al. (2012) UCP2 inhibits ROS-mediated apoptosis in A549 under hypoxic conditions. PLoS ONE 7 e30714 PubMed GONUTS page
- ↑ Wang, M et al. (2011) MicroRNA-21 regulates vascular smooth muscle cell function via targeting tropomyosin 1 in arteriosclerosis obliterans of lower extremities. Arterioscler. Thromb. Vasc. Biol. 31 2044-53 PubMed GONUTS page
- ↑ 19.0 19.1 Liu, Y et al. (2014) A feedback regulatory loop between HIF-1α and miR-21 in response to hypoxia in cardiomyocytes. FEBS Lett. 588 3137-46 PubMed GONUTS page
- ↑ 20.0 20.1 20.2 Darekar, S et al. (2012) Epstein-Barr virus immortalization of human B-cells leads to stabilization of hypoxia-induced factor 1 alpha, congruent with the Warburg effect. PLoS ONE 7 e42072 PubMed GONUTS page
- ↑ 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 Forsythe, JA et al. (1996) Activation of vascular endothelial growth factor gene transcription by hypoxia-inducible factor 1. Mol. Cell. Biol. 16 4604-13 PubMed GONUTS page
- ↑ 22.0 22.1 22.2 22.3 22.4 Wang, GL et al. (1995) Hypoxia-inducible factor 1 is a basic-helix-loop-helix-PAS heterodimer regulated by cellular O2 tension. Proc. Natl. Acad. Sci. U.S.A. 92 5510-4 PubMed GONUTS page
- ↑ Parsanejad, M et al. (2014) Regulation of the VHL/HIF-1 pathway by DJ-1. J. Neurosci. 34 8043-50 PubMed GONUTS page
- ↑ 24.0 24.1 24.2 Jung, YJ et al. (2003) IL-1beta-mediated up-regulation of HIF-1alpha via an NFkappaB/COX-2 pathway identifies HIF-1 as a critical link between inflammation and oncogenesis. FASEB J. 17 2115-7 PubMed GONUTS page
- ↑ 25.0 25.1 Wilson, JL et al. (2006) Endothelins induce CCR7 expression by breast tumor cells via endothelin receptor A and hypoxia-inducible factor-1. Cancer Res. 66 11802-7 PubMed GONUTS page
- ↑ An, X et al. (2009) Response gene to complement 32, a novel hypoxia-regulated angiogenic inhibitor. Circulation 120 617-27 PubMed GONUTS page
- ↑ Li, Q et al. (2012) CITED2 mutation links congenital heart defects to dysregulation of the cardiac gene VEGF and PITX2C expression. Biochem. Biophys. Res. Commun. 423 895-9 PubMed GONUTS page
- ↑ 28.0 28.1 28.2 28.3 Hogenesch, JB et al. (1997) Characterization of a subset of the basic-helix-loop-helix-PAS superfamily that interacts with components of the dioxin signaling pathway. J. Biol. Chem. 272 8581-93 PubMed GONUTS page
- ↑ 29.0 29.1 29.2 29.3 29.4 Higgins, DF et al. (2007) Hypoxia promotes fibrogenesis in vivo via HIF-1 stimulation of epithelial-to-mesenchymal transition. J. Clin. Invest. 117 3810-20 PubMed GONUTS page
- ↑ 30.0 30.1 Semenza, GL & Wang, GL (1992) A nuclear factor induced by hypoxia via de novo protein synthesis binds to the human erythropoietin gene enhancer at a site required for transcriptional activation. Mol. Cell. Biol. 12 5447-54 PubMed GONUTS page
- ↑ 31.0 31.1 31.2 31.3 Semenza, GL et al. (1994) Transcriptional regulation of genes encoding glycolytic enzymes by hypoxia-inducible factor 1. J. Biol. Chem. 269 23757-63 PubMed GONUTS page
- ↑ 32.0 32.1 Wang, GL & Semenza, GL (1993) General involvement of hypoxia-inducible factor 1 in transcriptional response to hypoxia. Proc. Natl. Acad. Sci. U.S.A. 90 4304-8 PubMed GONUTS page
- ↑ 33.0 33.1 33.2 Zhang, H et al. (2003) Cellular response to hypoxia involves signaling via Smad proteins. Blood 101 2253-60 PubMed GONUTS page
- ↑ Fisher, CD et al. (2009) Hepatic cytochrome P450 enzyme alterations in humans with progressive stages of nonalcoholic fatty liver disease. Drug Metab. Dispos. 37 2087-94 PubMed GONUTS page
- ↑ Huang, J et al. (2007) IOP1, a novel hydrogenase-like protein that modulates hypoxia-inducible factor-1alpha activity. Biochem. J. 401 341-52 PubMed GONUTS page
- ↑ 36.0 36.1 Hara, S et al. (2001) Expression and characterization of hypoxia-inducible factor (HIF)-3alpha in human kidney: suppression of HIF-mediated gene expression by HIF-3alpha. Biochem. Biophys. Res. Commun. 287 808-13 PubMed GONUTS page
- ↑ 37.0 37.1 Li, Y et al. (2009) HUMMR, a hypoxia- and HIF-1alpha-inducible protein, alters mitochondrial distribution and transport. J. Cell Biol. 185 1065-81 PubMed GONUTS page
- ↑ 38.0 38.1 Xu, D et al. (2010) Plk3 functions as an essential component of the hypoxia regulatory pathway by direct phosphorylation of HIF-1alpha. J. Biol. Chem. 285 38944-50 PubMed GONUTS page
- ↑ 39.0 39.1 Chen, B et al. (2010) Hypoxia downregulates p53 but induces apoptosis and enhances expression of BAD in cultures of human syncytiotrophoblasts. Am. J. Physiol., Cell Physiol. 299 C968-76 PubMed GONUTS page
- ↑ 40.0 40.1 Seo, KS et al. (2015) SIRT2 regulates tumour hypoxia response by promoting HIF-1α hydroxylation. Oncogene 34 1354-62 PubMed GONUTS page
- ↑ Stolze, I et al. (2002) Hypoxia-inducible erythropoietin gene expression in human neuroblastoma cells. Blood 100 2623-8 PubMed GONUTS page
- ↑ Mitani, T et al. (2011) Hypoxia enhances transcriptional activity of androgen receptor through hypoxia-inducible factor-1α in a low androgen environment. J. Steroid Biochem. Mol. Biol. 123 58-64 PubMed GONUTS page
- ↑ 43.0 43.1 Bhattacharya, S et al. (1999) Functional role of p35srj, a novel p300/CBP binding protein, during transactivation by HIF-1. Genes Dev. 13 64-75 PubMed GONUTS page
- ↑ 44.0 44.1 44.2 44.3 Kim, EJ et al. (2008) Transcriptional activation of HIF-1 by RORalpha and its role in hypoxia signaling. Arterioscler. Thromb. Vasc. Biol. 28 1796-802 PubMed GONUTS page
- ↑ 45.0 45.1 45.2 45.3 45.4 45.5 Kung, AL et al. (2004) Small molecule blockade of transcriptional coactivation of the hypoxia-inducible factor pathway. Cancer Cell 6 33-43 PubMed GONUTS page
- ↑ 46.0 46.1 Mahon, PC et al. (2001) FIH-1: a novel protein that interacts with HIF-1alpha and VHL to mediate repression of HIF-1 transcriptional activity. Genes Dev. 15 2675-86 PubMed GONUTS page
- ↑ 47.0 47.1 Li, Z et al. (2008) Correlation between the expression of divalent metal transporter 1 and the content of hypoxia-inducible factor-1 in hypoxic HepG2 cells. J. Cell. Mol. Med. 12 569-79 PubMed GONUTS page
- ↑ 48.0 48.1 48.2 48.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 49.0 49.1 Hogenesch, JB et al. (1998) The basic-helix-loop-helix-PAS orphan MOP3 forms transcriptionally active complexes with circadian and hypoxia factors. Proc. Natl. Acad. Sci. U.S.A. 95 5474-9 PubMed GONUTS page
- ↑ Cheng, J et al. (2007) SUMO-specific protease 1 is essential for stabilization of HIF1alpha during hypoxia. Cell 131 584-95 PubMed GONUTS page
- ↑ 51.0 51.1 51.2 Woods, SL & Whitelaw, ML (2002) Differential activities of murine single minded 1 (SIM1) and SIM2 on a hypoxic response element. Cross-talk between basic helix-loop-helix/per-Arnt-Sim homology transcription factors. J. Biol. Chem. 277 10236-43 PubMed GONUTS page
- ↑ Hold, GL & El-Omar, EM (2008) Genetic aspects of inflammation and cancer. Biochem. J. 410 225-35 PubMed GONUTS page
- ↑ Chang, EI et al. (2007) Hypoxia, hormones, and endothelial progenitor cells in hemangioma. Lymphat Res Biol 5 237-43 PubMed GONUTS page
a
b
c
- GO:0048593 ! camera-type eye morphogenesis
- GO:0003208 ! cardiac ventricle morphogenesis
- GO:0051216 ! cartilage development
- Catarrhini
- GO:0071456 ! cellular response to hypoxia
- GO:0071347 ! cellular response to interleukin-1
- GO:0030154 ! cell differentiation
- GO:0021987 ! cerebral cortex development
- Chordata
- GO:0032963 ! collagen metabolic process
- GO:0002248 ! connective tissue replacement involved in inflammatory response wound healing
- Craniata
- GO:0019221 ! cytokine-mediated signaling pathway
- GO:0005737 ! cytoplasm
- GO:0005829 ! cytosol
d
- GO:0048546 ! digestive tract morphogenesis
- GO:0001228 ! DNA-binding transcription activator activity, RNA polymerase II-specific
- GO:0000981 ! DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:0003700 ! DNA-binding transcription factor activity
- GO:0003677 ! DNA binding
- GO:0071542 ! dopaminergic neuron differentiation
e
- GO:0070888 ! E-box binding
- GO:0051541 ! elastin metabolic process
- GO:0035162 ! embryonic hemopoiesis
- GO:0001892 ! embryonic placenta development
- GO:0019899 ! enzyme binding
- GO:0061030 ! epithelial cell differentiation involved in mammary gland alveolus development
- GO:0001837 ! epithelial to mesenchymal transition
- Euarchontoglires
- Eukaryota
- Euteleostomi
- Eutheria
h
i
m
n
- GO:0030279 ! negative regulation of ossification
- GO:0045926 ! negative regulation of growth
- GO:0043066 ! negative regulation of apoptotic process
- GO:0032007 ! negative regulation of TOR signaling
- GO:0010629 ! negative regulation of gene expression
- GO:0070244 ! negative regulation of thymocyte apoptotic process
- GO:0030502 ! negative regulation of bone mineralization
- GO:0043524 ! negative regulation of neuron apoptotic process
- GO:2000378 ! negative regulation of reactive oxygen species metabolic process
- GO:2001054 ! negative regulation of mesenchymal cell apoptotic process
- GO:1903377 ! negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
- GO:0001755 ! neural crest cell migration
- GO:0021502 ! neural fold elevation formation
- GO:0016604 ! nuclear body
- GO:0000790 ! nuclear chromatin
- GO:0035257 ! nuclear hormone receptor binding
- GO:0016607 ! nuclear speck
- GO:0005654 ! nucleoplasm
- GO:0005634 ! nucleus
o
- GO:0061419 ! obsolete positive regulation of transcription from RNA polymerase II promoter in response to hypoxia
- GO:0010870 ! obsolete positive regulation of receptor biosynthetic process
- GO:0061418 ! obsolete regulation of transcription from RNA polymerase II promoter in response to hypoxia
- GO:0043619 ! obsolete regulation of transcription from RNA polymerase II promoter in response to oxidative stress
- GO:0003151 ! outflow tract morphogenesis
p
- GO:0002039 ! p53 binding
- GO:0045766 ! positive regulation of angiogenesis
- GO:0010628 ! positive regulation of gene expression
- GO:0002052 ! positive regulation of neuroblast proliferation
- GO:0051000 ! positive regulation of nitric-oxide synthase activity
- GO:0032722 ! positive regulation of chemokine production
- GO:0001938 ! positive regulation of endothelial cell proliferation
- GO:0070101 ! positive regulation of chemokine-mediated signaling pathway
- GO:0045648 ! positive regulation of erythrocyte differentiation
- GO:0010508 ! positive regulation of autophagy
- GO:0010575 ! positive regulation of vascular endothelial growth factor production
- GO:0045821 ! positive regulation of glycolytic process
- GO:1902895 ! positive regulation of miRNA transcription
- GO:0046886 ! positive regulation of hormone biosynthetic process
- GO:0043536 ! positive regulation of blood vessel endothelial cell migration
- GO:1903599 ! positive regulation of autophagy of mitochondrion
- GO:0030949 ! positive regulation of vascular endothelial growth factor receptor signaling pathway
- GO:0016239 ! positive regulation of macroautophagy
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0035774 ! positive regulation of insulin secretion involved in cellular response to glucose stimulus
- GO:0010634 ! positive regulation of epithelial cell migration
- GO:0043687 ! post-translational protein modification
- Primates
- GO:0032991 ! protein-containing complex
- GO:0016579 ! protein deubiquitination
- GO:0046983 ! protein dimerization activity
- GO:0019904 ! protein domain specific binding
- GO:0046982 ! protein heterodimerization activity
- GO:0019901 ! protein kinase binding
- GO:0016567 ! protein ubiquitination
r
- GO:0042127 ! regulation of cell population proliferation
- GO:0006355 ! regulation of DNA-templated transcription
- GO:0010468 ! regulation of gene expression
- GO:0050790 ! regulation of catalytic activity
- GO:0070243 ! regulation of thymocyte apoptotic process
- GO:0006110 ! regulation of glycolytic process
- GO:0032909 ! regulation of transforming growth factor beta2 production
- GO:1903715 ! regulation of aerobic respiration
- GO:0006357 ! regulation of transcription by RNA polymerase II
- GO:0001666 ! response to hypoxia
- GO:0014850 ! response to muscle activity
- GO:0010039 ! response to iron ion
- GO:0061298 ! retina vasculature development in camera-type eye
- GO:0000977 ! RNA polymerase II transcription regulatory region sequence-specific DNA binding
- GO:0090575 ! RNA polymerase II transcription regulator complex
t