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HUMAN:HIF1A

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) HIF1A (synonyms: BHLHE78, MOP1, PASD8)
Protein Name(s) Hypoxia-inducible factor 1-alpha

HIF-1-alpha HIF1-alpha ARNT-interacting protein Basic-helix-loop-helix-PAS protein MOP1 Class E basic helix-loop-helix protein 78 bHLHe78 Member of PAS protein 1 PAS domain-containing protein 8

External Links
UniProt Q16665
EMBL U22431
U29165
AF050127
AF050115
AF050116
AF050117
AF050118
AF050119
AF050120
AF050121
AF050122
AF050123
AF050124
AF050125
AF050126
FJ790247
AF207601
AF207602
AF208487
AF304431
AB073325
BT009776
AL137129
BC012527
CCDS CCDS58324.1
CCDS9753.1
CCDS9754.1
PIR I38972
RefSeq NP_001230013.1
NP_001521.1
NP_851397.1
UniGene Hs.597216
Hs.719495
PDB 1D7G
1H2K
1H2L
1H2M
1L3E
1L8C
1LM8
1LQB
2ILM
3HQR
3HQU
4AJY
4H6J
PDBsum 1D7G
1H2K
1H2L
1H2M
1L3E
1L8C
1LM8
1LQB
2ILM
3HQR
3HQU
4AJY
4H6J
DisProt DP00262
ProteinModelPortal Q16665
SMR Q16665
BioGrid 109338
DIP DIP-29722N
IntAct Q16665
MINT MINT-133270
STRING 9606.ENSP00000338018
BindingDB Q16665
ChEMBL CHEMBL2221345
DrugBank DB01136
PhosphoSite Q16665
DMDM 2498017
MaxQB Q16665
PaxDb Q16665
PRIDE Q16665
DNASU 3091
Ensembl ENST00000323441
ENST00000337138
ENST00000539097
GeneID 3091
KEGG hsa:3091
UCSC uc001xfq.2
uc021rua.1
CTD 3091
GeneCards GC14P062162
HGNC HGNC:4910
HPA CAB017442
HPA001275
MIM 603348
neXtProt NX_Q16665
PharmGKB PA29283
eggNOG NOG289264
GeneTree ENSGT00760000118788
HOGENOM HOG000234306
HOVERGEN HBG060456
InParanoid Q16665
KO K08268
OMA QNAQRKR
OrthoDB EOG7JDQX8
PhylomeDB Q16665
TreeFam TF317772
Reactome REACT_118780
REACT_120916
REACT_121092
REACT_121226
REACT_24941
SignaLink Q16665
ChiTaRS HIF1A
EvolutionaryTrace Q16665
GeneWiki HIF1A
GenomeRNAi 3091
NextBio 12265
PRO PR:Q16665
Proteomes UP000005640
Bgee Q16665
CleanEx HS_HIF1A
ExpressionAtlas Q16665
Genevestigator Q16665
GO GO:0005737
GO:0005829
GO:0031514
GO:0005730
GO:0005654
GO:0005634
GO:0090575
GO:0005667
GO:0019899
GO:0035035
GO:0051879
GO:0035257
GO:0046982
GO:0019901
GO:0001077
GO:0003705
GO:0001076
GO:0043565
GO:0003700
GO:0004871
GO:0008134
GO:0000989
GO:0031625
GO:0001525
GO:0019896
GO:0001922
GO:0003208
GO:0051216
GO:0006879
GO:0071456
GO:0071347
GO:0021987
GO:0032963
GO:0002248
GO:0048546
GO:0071542
GO:0051541
GO:0035162
GO:0001892
GO:0061030
GO:0001837
GO:0042593
GO:0001947
GO:0042541
GO:0060574
GO:0006089
GO:0007595
GO:0042789
GO:0046716
GO:0030502
GO:0045926
GO:2001054
GO:1903377
GO:0070244
GO:0032007
GO:0001755
GO:0021502
GO:0007219
GO:0003151
GO:0032364
GO:0045766
GO:0032722
GO:0070101
GO:0001938
GO:0010634
GO:0045648
GO:0045821
GO:0046886
GO:0035774
GO:0002052
GO:0051000
GO:0010870
GO:0045944
GO:0061419
GO:0045893
GO:0030949
GO:0010575
GO:0010468
GO:0061418
GO:0043619
GO:0006355
GO:0032909
GO:0001666
GO:0014850
GO:0061298
GO:0007165
GO:0010573
GO:0008542
InterPro IPR011598
IPR001321
IPR014887
IPR021537
IPR001610
IPR000014
IPR013767
Pfam PF11413
PF08778
PF00989
PRINTS PR01080
SMART SM00353
SM00086
SM00091
SUPFAM SSF47459
SSF55785
TIGRFAMs TIGR00229
PROSITE PS50888
PS50112

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0071456

PMID:20412594[1]

ECO:0000314

Figure 2 shows the increase in lactate production with hypoxia by lactate dehydrogenase in comparison to normoxia.

complete

GO:0071456

cellular response to hypoxia

PMID:10758161[2]

ECO:0000270

P

Figure 1

complete

GO:0010508

positive regulation of autophagy

PMID:21412054[3]

ECO:0000315

P

Fig 5.

When HIF-1α is knockdown, LC3B cleavage, a well characterized marker for autophagy, is reduced in response to doxorubicin and daunorubicin.

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:19274049[4]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:19274049[4]

ECO:0000255

match to sequence model evidence used in manual assertion

InterPro:IPR001321
InterPro:IPR011598

F

Seeded From UniProt

complete

involved_in

GO:1902895

positive regulation of pri-miRNA transcription by RNA polymerase II

PMID:19141645[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • part_of:(GO:0071456)
  • regulates_expression_of:(ENSEMBL:ENSG00000199038)|part_of(GO:0071456)
  • regulates_expression_of:(ENSEMBL:ENSG00000199143)

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:19782034[6]

ECO:0000314

direct assay evidence used in manual assertion

C

coincident_with:(ENSEMBL:ENSG00000199038)

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

PMID:19782034[6]

ECO:0000314

direct assay evidence used in manual assertion

F

has_direct_input:(ENSEMBL:ENSG00000199038)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:19782034[6]

ECO:0000314

direct assay evidence used in manual assertion

F

has_direct_input:(ENSEMBL:ENSG00000199038)

Seeded From UniProt

complete

involved_in

GO:0071456

cellular response to hypoxia

PMID:19782034[6]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1902895

positive regulation of pri-miRNA transcription by RNA polymerase II

PMID:19782034[6]

ECO:0000314

direct assay evidence used in manual assertion

P

  • part_of:(GO:0071456)
  • regulates_expression_of:(ENSEMBL:ENSG00000199038)

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

GO_REF:0000113

ECO:0005556

multiple sequence alignment evidence used in manual assertion

UniProtKB:P97481

F

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:22886504[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • regulates_expression_of:(ENSEMBL:ENSG00000199038)
  • part_of:(GO:0071456)
  • occurs_in:(CL:0002591)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20972335[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:14594809[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0019904

protein domain specific binding

PMID:14594809[9]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P45481

F

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:24244340[10]

ECO:0000314

direct assay evidence used in manual assertion

P

  • regulates_expression_of:(ENSEMBL:ENSG00000207954)
  • occurs_in:(CL:2000008)

Seeded From UniProt

complete

enables

GO:0002039

p53 binding

PMID:15629713[11]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P04637

F

Seeded From UniProt

complete

involved_in

GO:0043536

positive regulation of blood vessel endothelial cell migration

PMID:26879375[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:25043030[13]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:25043030[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:25043030[13]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:15459207[14]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010629

negative regulation of gene expression

PMID:26879375[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • regulates_expression_of:(ENSEMBL:ENSG00000128052)
  • occurs_in:(CL:0000071)

Seeded From UniProt

complete

involved_in

GO:0045766

positive regulation of angiogenesis

PMID:26879375[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0000071)

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:15629713[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0010039

response to iron ion

PMID:28296633[15]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:24048733[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:24048733[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

GO:0001666

response to hypoxia

PMID:22292025[17]

ECO:0000314

P

Fig 1A as hypoxia occurs, levels of HIF-1alpha increase

complete
CACAO 3761

involved_in

GO:0006366

transcription by RNA polymerase II

PMID:24048733[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045766

positive regulation of angiogenesis

PMID:24048733[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:21817107[18]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • regulates_expression_of:(ENSEMBL:ENSG00000062716)
  • occurs_in:(CL:0000359)
  • occurs_in:(UBERON:0002060)

Seeded From UniProt

complete

involved_in

GO:1902895

positive regulation of pri-miRNA transcription by RNA polymerase II

PMID:24983504[19]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • part_of:(GO:0071456)
  • regulates_transcription_of:(ENSEMBL:ENSG00000062716)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24983504[19]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

  • part_of:(GO:0071456)
  • has_regulation_target:(ENSEMBL:ENSG00000062716)

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q61221

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:22848707[20]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0090575

RNA polymerase II transcription factor complex

PMID:8756616[21]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0090575

RNA polymerase II transcription factor complex

PMID:7539918[22]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:1903377

negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway

PMID:24899725[23]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071347

cellular response to interleukin-1

PMID:12958148[24]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0070101

positive regulation of chemokine-mediated signaling pathway

PMID:17178876[25]

ECO:0000305

curator inference used in manual assertion

GO:0010870

P

Seeded From UniProt

complete

involved_in

GO:0061419

positive regulation of transcription from RNA polymerase II promoter in response to hypoxia

PMID:19652095[26]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(UniProtKB:Q9H4X1)

Seeded From UniProt

complete

involved_in

GO:0061419

positive regulation of transcription from RNA polymerase II promoter in response to hypoxia

PMID:22735262[27]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0051879

Hsp90 protein binding

PMID:9079689[28]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0051541

elastin metabolic process

PMID:18037992[29]

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q61221

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

PMID:9079689[28]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P27540

F

Seeded From UniProt

complete

involved_in

GO:0046886

positive regulation of hormone biosynthetic process

PMID:1448077[30]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:8089148[31]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045821

positive regulation of glycolytic process

PMID:8089148[31]

ECO:0000305

curator inference used in manual assertion

GO:0043619

P

Seeded From UniProt

complete

involved_in

GO:0045766

positive regulation of angiogenesis

PMID:8756616[21]

ECO:0000305

curator inference used in manual assertion

GO:0010575

P

Seeded From UniProt

complete

involved_in

GO:0045648

positive regulation of erythrocyte differentiation

PMID:1448077[30]

ECO:0000305

curator inference used in manual assertion

GO:0046886

P

Seeded From UniProt

complete

involved_in

GO:0043619

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

PMID:8387214[32]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043619

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

PMID:8089148[31]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

contributes_to

GO:0043565

sequence-specific DNA binding

PMID:7539918[22]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

contributes_to

GO:0043565

sequence-specific DNA binding

PMID:8756616[21]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

contributes_to

GO:0043565

sequence-specific DNA binding

PMID:9079689[28]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0042789

mRNA transcription by RNA polymerase II

PMID:7539918[22]

ECO:0000305

curator inference used in manual assertion

GO:0000981

P

Seeded From UniProt

complete

involved_in

GO:0032963

collagen metabolic process

PMID:18037992[29]

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q61221

P

Seeded From UniProt

complete

involved_in

GO:0032909

regulation of transforming growth factor beta2 production

PMID:12411310[33]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0030949

positive regulation of vascular endothelial growth factor receptor signaling pathway

PMID:12958148[24]

ECO:0000305

curator inference used in manual assertion

GO:0010573

P

Seeded From UniProt

complete

involved_in

GO:0030949

positive regulation of vascular endothelial growth factor receptor signaling pathway

PMID:8756616[21]

ECO:0000305

curator inference used in manual assertion

GO:0010575

P

Seeded From UniProt

complete

involved_in

GO:0010870

positive regulation of receptor biosynthetic process

PMID:17178876[25]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010634

positive regulation of epithelial cell migration

PMID:18037992[29]

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q61221

P

Seeded From UniProt

complete

involved_in

GO:0010575

positive regulation of vascular endothelial growth factor production

PMID:8756616[21]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010573

vascular endothelial growth factor production

PMID:12958148[24]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:7539918[22]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P27540

F

Seeded From UniProt

complete

involved_in

GO:0007165

signal transduction

PMID:12411310[33]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:19651758[34]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:8089148[31]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

contributes_to

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:7539918[22]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0000165)

Seeded From UniProt

complete

contributes_to

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:8756616[21]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0000165)

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:9079689[28]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0000165)

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:8387214[32]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0000165)

Seeded From UniProt

complete

involved_in

GO:0002248

connective tissue replacement involved in inflammatory response wound healing

PMID:18037992[29]

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q61221

P

Seeded From UniProt

complete

involved_in

GO:0001938

positive regulation of endothelial cell proliferation

PMID:8756616[21]

ECO:0000305

curator inference used in manual assertion

GO:0010575

P

Seeded From UniProt

complete

involved_in

GO:0001837

epithelial to mesenchymal transition

PMID:18037992[29]

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q61221

P

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

PMID:12411310[33]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

PMID:8756616[21]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032364

oxygen homeostasis

PMID:16956324[35]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071456

cellular response to hypoxia

PMID:11573933[36]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071456

cellular response to hypoxia

PMID:19528298[37]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071456

cellular response to hypoxia

PMID:20889502[38]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071456

cellular response to hypoxia

PMID:20810912[39]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0061419

positive regulation of transcription from RNA polymerase II promoter in response to hypoxia

PMID:24681946[40]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

PMID:12239177[41]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9HBZ2

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:11573933[36]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:21056661[42]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(UniProtKB:Q99801)

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:9887100[43]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0035257

nuclear hormone receptor binding

PMID:18658046[44]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P35398

F

Seeded From UniProt

complete

enables

GO:0035035

histone acetyltransferase binding

PMID:15261140[45]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q09472

F

Seeded From UniProt

complete

enables

GO:0031625

ubiquitin protein ligase binding

PMID:11641274[46]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P40337

F

Seeded From UniProt

complete

enables

GO:0019901

protein kinase binding

PMID:20889502[38]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9H4B4

F

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:11641274[46]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9NWT6

F

Seeded From UniProt

complete

involved_in

GO:0019896

axonal transport of mitochondrion

PMID:19528298[37]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010575

positive regulation of vascular endothelial growth factor production

PMID:18658046[44]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010468

regulation of gene expression

PMID:18419598[47]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:15261140[45]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:24681946[40]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18658046[44]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20810912[39]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:15261140[45]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:18658046[44]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

PMID:9887100[43]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

PMID:18419598[47]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

PMID:15261140[45]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[48]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0039411
FB:FBgn0262139
FB:FBgn0266411
MGI:MGI:106918
MGI:MGI:109169
MGI:MGI:2664186
PANTHER:PTN001127032
RGD:61928
RGD:68404
RGD:70332
UniProtKB:Q16665
UniProtKB:Q8IUM7
UniProtKB:Q99814
WB:WBGene00000521
WB:WBGene00001851

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:21873635[48]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0039411
PANTHER:PTN000548738
UniProtKB:Q9Y2N7

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[48]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004666
FB:FBgn0039411
FB:FBgn0262139
FB:FBgn0266411
MGI:MGI:106918
MGI:MGI:109169
MGI:MGI:109205
MGI:MGI:1351610
MGI:MGI:1859778
MGI:MGI:2664186
MGI:MGI:98306
MGI:MGI:98307
PANTHER:PTN000548738
RGD:61928
RGD:68404
RGD:70332
UniProtKB:Q16665
UniProtKB:Q9XTA5
WB:WBGene00001851

C

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[48]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:106918
MGI:MGI:2664186
PANTHER:PTN000548738
UniProtKB:Q8IUM7

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:9576906[49]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:O00327

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:17981124[50]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:Q9P0U3

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:11782478[51]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

PMID:9576906[49]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:O00327

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:11782478[51]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

PMID:11782478[51]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0016604

nuclear body

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:1904115

axon cytoplasm

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0019896

C

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:D4A8P8
ensembl:ENSRNOP00000042230

P

Seeded From UniProt

complete

involved_in

GO:2001054

negative regulation of mesenchymal cell apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:2000378

negative regulation of reactive oxygen species metabolic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:1903715

regulation of aerobic respiration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:1903599

positive regulation of autophagy of mitochondrion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0097411

hypoxia-inducible factor-1alpha signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0071542

dopaminergic neuron differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0071456

cellular response to hypoxia

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

enables

GO:0070888

E-box binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

F

Seeded From UniProt

complete

involved_in

GO:0070244

negative regulation of thymocyte apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

GO:0001666

response to hypoxia

PMID:22848707[20]

ECO:0000315

P

Figure 6. Shows a favoring of aerobic glycolysis in the immortalized lymphoblastoid cell lines (LCL) when compared to both CD40+IL4 activated cells and newly Epstein-Barr Virus-infected B-cells. In addition to the increased levels of lactate and pyruvate, increased ROS levels were found in LCL's in comparison to the CD40+IL4 and EBV B-Cell cell lines.

complete
CACAO 9656

involved_in

GO:0070243

regulation of thymocyte apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

GO:0005634

nucleus

PMID:22848707[20]

ECO:0000314

C

Figure 4

complete
CACAO 10098

involved_in

GO:0061298

retina vasculature development in camera-type eye

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0061072

iris morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0061030

epithelial cell differentiation involved in mammary gland alveolus development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0060574

intestinal epithelial cell maturation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0051541

elastin metabolic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0051216

cartilage development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0050790

regulation of catalytic activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0048593

camera-type eye morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0048546

digestive tract morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0048514

blood vessel morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

F

Seeded From UniProt

complete

involved_in

GO:0046716

muscle cell cellular homeostasis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0045926

negative regulation of growth

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0045648

positive regulation of erythrocyte differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0043619

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

F

Seeded From UniProt

complete

involved_in

GO:0043524

negative regulation of neuron apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0043066

negative regulation of apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

enables

GO:0042826

histone deacetylase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

F

Seeded From UniProt

complete

involved_in

GO:0042593

glucose homeostasis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0042541

hemoglobin biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0042127

regulation of cell population proliferation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0035774

positive regulation of insulin secretion involved in cellular response to glucose stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0035162

embryonic hemopoiesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0032963

collagen metabolic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0032364

oxygen homeostasis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0032007

negative regulation of TOR signaling

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

part_of

GO:0031514

motile cilium

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

C

Seeded From UniProt

complete

involved_in

GO:0030949

positive regulation of vascular endothelial growth factor receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0030502

negative regulation of bone mineralization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0030279

negative regulation of ossification

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0030154

cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0021987

cerebral cortex development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0021502

neural fold elevation formation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

C

Seeded From UniProt

complete

involved_in

GO:0016239

positive regulation of macroautophagy

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0014850

response to muscle activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0010634

positive regulation of epithelial cell migration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0010508

positive regulation of autophagy

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0010468

regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0008542

visual learning

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0007595

lactation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0006879

cellular iron ion homeostasis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0006110

regulation of glycolytic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0006089

lactate metabolic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

F

Seeded From UniProt

complete

involved_in

GO:0003208

cardiac ventricle morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0003151

outflow tract morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0002248

connective tissue replacement involved in inflammatory response wound healing

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0002052

positive regulation of neuroblast proliferation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001947

heart looping

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001944

vasculature development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001922

B-1 B cell homeostasis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001892

embryonic placenta development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001837

epithelial to mesenchymal transition

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001755

neural crest cell migration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001568

blood vessel development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

involved_in

GO:0001525

angiogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

P

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q61221
ensembl:ENSMUSP00000021530

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001321

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001321

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001321
InterPro:IPR013767

P

Seeded From UniProt

complete

enables

GO:0046983

protein dimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011598
InterPro:IPR036638

F

Seeded From UniProt

complete

involved_in

GO:0051000

positive regulation of nitric-oxide synthase activity

PMID:18254728[52]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032722

positive regulation of chemokine production

PMID:18370914[53]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

PMID:15261140[45]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:15261140[45]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0061418

regulation of transcription from RNA polymerase II promoter in response to hypoxia

Reactome:R-HSA-1234174

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043687

post-translational protein modification

Reactome:R-HSA-597592

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0019221

cytokine-mediated signaling pathway

Reactome:R-HSA-6785807

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016579

protein deubiquitination

Reactome:R-HSA-5688426

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016567

protein ubiquitination

Reactome:R-HSA-8956106

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

Reactome:R-HSA-8956106
Reactome:R-HSA-8956103
Reactome:R-HSA-8857583
Reactome:R-HSA-6781797
Reactome:R-HSA-1234183
Reactome:R-HSA-1234177
Reactome:R-HSA-1234175
Reactome:R-HSA-1234164
Reactome:R-HSA-1234163
Reactome:R-HSA-1234161
Reactome:R-HSA-1234159

ECO:0000304

author statement supported by traceable reference used in manual assertion











C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-NUL-2065560
Reactome:R-HSA-8848812
Reactome:R-HSA-6790036
Reactome:R-HSA-1234181
Reactome:R-HSA-1234175
Reactome:R-HSA-1234172
Reactome:R-HSA-1234171
Reactome:R-HSA-1234169
Reactome:R-HSA-1234167
Reactome:R-HSA-1234161

ECO:0000304

author statement supported by traceable reference used in manual assertion










C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0186

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Sedoris, KC et al. (2010) Hypoxia induces differential translation of enolase/MBP-1. BMC Cancer 10 157 PubMed GONUTS page
  2. Sutter, CH et al. (2000) Hypoxia-inducible factor 1alpha protein expression is controlled by oxygen-regulated ubiquitination that is disrupted by deletions and missense mutations. Proc. Natl. Acad. Sci. U.S.A. 97 4748-53 PubMed GONUTS page
  3. Culver, C et al. (2011) HIF-1α depletion results in SP1-mediated cell cycle disruption and alters the cellular response to chemotherapeutic drugs. Cell Cycle 10 1249-60 PubMed GONUTS page
  4. 4.0 4.1 Vaquerizas, JM et al. (2009) A census of human transcription factors: function, expression and evolution. Nat. Rev. Genet. 10 252-63 PubMed GONUTS page
  5. Crosby, ME et al. (2009) MicroRNA regulation of DNA repair gene expression in hypoxic stress. Cancer Res. 69 1221-9 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 6.4 Huang, X et al. (2009) Hypoxia-inducible mir-210 regulates normoxic gene expression involved in tumor initiation. Mol. Cell 35 856-67 PubMed GONUTS page
  7. Gou, D et al. (2012) miR-210 has an antiapoptotic effect in pulmonary artery smooth muscle cells during hypoxia. Am. J. Physiol. Lung Cell Mol. Physiol. 303 L682-91 PubMed GONUTS page
  8. Ghosh, G et al. (2010) Hypoxia-induced microRNA-424 expression in human endothelial cells regulates HIF-α isoforms and promotes angiogenesis. J. Clin. Invest. 120 4141-54 PubMed GONUTS page
  9. 9.0 9.1 De Guzman, RN et al. (2004) Interaction of the TAZ1 domain of the CREB-binding protein with the activation domain of CITED2: regulation by competition between intrinsically unstructured ligands for non-identical binding sites. J. Biol. Chem. 279 3042-9 PubMed GONUTS page
  10. Sen, A et al. (2013) MicroRNA-138 regulates hypoxia-induced endothelial cell dysfunction by targeting S100A1. PLoS ONE 8 e78684 PubMed GONUTS page
  11. 11.0 11.1 Sánchez-Puig, N et al. (2005) Binding of natively unfolded HIF-1alpha ODD domain to p53. Mol. Cell 17 11-21 PubMed GONUTS page
  12. 12.0 12.1 12.2 Zhou, Y et al. (2016) Hydrogen sulfide promotes angiogenesis by downregulating miR-640 via the VEGFR2/mTOR pathway. Am. J. Physiol., Cell Physiol. 310 C305-17 PubMed GONUTS page
  13. 13.0 13.1 13.2 Li, B et al. (2014) Fructose-1,6-bisphosphatase opposes renal carcinoma progression. Nature 513 251-5 PubMed GONUTS page
  14. Mizukami, Y et al. (2004) ERK1/2 regulates intracellular ATP levels through alpha-enolase expression in cardiomyocytes exposed to ischemic hypoxia and reoxygenation. J. Biol. Chem. 279 50120-31 PubMed GONUTS page
  15. Miles, AL et al. (2017) The vacuolar-ATPase complex and assembly factors, TMEM199 and CCDC115, control HIF1α prolyl hydroxylation by regulating cellular iron levels. Elife 6 PubMed GONUTS page
  16. 16.0 16.1 16.2 16.3 Roy, A et al. (2013) Antidicer RNAse activity of monocyte chemotactic protein-induced protein-1 is critical for inducing angiogenesis. Am. J. Physiol., Cell Physiol. 305 C1021-32 PubMed GONUTS page
  17. Deng, S et al. (2012) UCP2 inhibits ROS-mediated apoptosis in A549 under hypoxic conditions. PLoS ONE 7 e30714 PubMed GONUTS page
  18. Wang, M et al. (2011) MicroRNA-21 regulates vascular smooth muscle cell function via targeting tropomyosin 1 in arteriosclerosis obliterans of lower extremities. Arterioscler. Thromb. Vasc. Biol. 31 2044-53 PubMed GONUTS page
  19. 19.0 19.1 Liu, Y et al. (2014) A feedback regulatory loop between HIF-1α and miR-21 in response to hypoxia in cardiomyocytes. FEBS Lett. 588 3137-46 PubMed GONUTS page
  20. 20.0 20.1 20.2 Darekar, S et al. (2012) Epstein-Barr virus immortalization of human B-cells leads to stabilization of hypoxia-induced factor 1 alpha, congruent with the Warburg effect. PLoS ONE 7 e42072 PubMed GONUTS page
  21. 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 Forsythe, JA et al. (1996) Activation of vascular endothelial growth factor gene transcription by hypoxia-inducible factor 1. Mol. Cell. Biol. 16 4604-13 PubMed GONUTS page
  22. 22.0 22.1 22.2 22.3 22.4 Wang, GL et al. (1995) Hypoxia-inducible factor 1 is a basic-helix-loop-helix-PAS heterodimer regulated by cellular O2 tension. Proc. Natl. Acad. Sci. U.S.A. 92 5510-4 PubMed GONUTS page
  23. Parsanejad, M et al. (2014) Regulation of the VHL/HIF-1 pathway by DJ-1. J. Neurosci. 34 8043-50 PubMed GONUTS page
  24. 24.0 24.1 24.2 Jung, YJ et al. (2003) IL-1beta-mediated up-regulation of HIF-1alpha via an NFkappaB/COX-2 pathway identifies HIF-1 as a critical link between inflammation and oncogenesis. FASEB J. 17 2115-7 PubMed GONUTS page
  25. 25.0 25.1 Wilson, JL et al. (2006) Endothelins induce CCR7 expression by breast tumor cells via endothelin receptor A and hypoxia-inducible factor-1. Cancer Res. 66 11802-7 PubMed GONUTS page
  26. An, X et al. (2009) Response gene to complement 32, a novel hypoxia-regulated angiogenic inhibitor. Circulation 120 617-27 PubMed GONUTS page
  27. Li, Q et al. (2012) CITED2 mutation links congenital heart defects to dysregulation of the cardiac gene VEGF and PITX2C expression. Biochem. Biophys. Res. Commun. 423 895-9 PubMed GONUTS page
  28. 28.0 28.1 28.2 28.3 Hogenesch, JB et al. (1997) Characterization of a subset of the basic-helix-loop-helix-PAS superfamily that interacts with components of the dioxin signaling pathway. J. Biol. Chem. 272 8581-93 PubMed GONUTS page
  29. 29.0 29.1 29.2 29.3 29.4 Higgins, DF et al. (2007) Hypoxia promotes fibrogenesis in vivo via HIF-1 stimulation of epithelial-to-mesenchymal transition. J. Clin. Invest. 117 3810-20 PubMed GONUTS page
  30. 30.0 30.1 Semenza, GL & Wang, GL (1992) A nuclear factor induced by hypoxia via de novo protein synthesis binds to the human erythropoietin gene enhancer at a site required for transcriptional activation. Mol. Cell. Biol. 12 5447-54 PubMed GONUTS page
  31. 31.0 31.1 31.2 31.3 Semenza, GL et al. (1994) Transcriptional regulation of genes encoding glycolytic enzymes by hypoxia-inducible factor 1. J. Biol. Chem. 269 23757-63 PubMed GONUTS page
  32. 32.0 32.1 Wang, GL & Semenza, GL (1993) General involvement of hypoxia-inducible factor 1 in transcriptional response to hypoxia. Proc. Natl. Acad. Sci. U.S.A. 90 4304-8 PubMed GONUTS page
  33. 33.0 33.1 33.2 Zhang, H et al. (2003) Cellular response to hypoxia involves signaling via Smad proteins. Blood 101 2253-60 PubMed GONUTS page
  34. Fisher, CD et al. (2009) Hepatic cytochrome P450 enzyme alterations in humans with progressive stages of nonalcoholic fatty liver disease. Drug Metab. Dispos. 37 2087-94 PubMed GONUTS page
  35. Huang, J et al. (2007) IOP1, a novel hydrogenase-like protein that modulates hypoxia-inducible factor-1alpha activity. Biochem. J. 401 341-52 PubMed GONUTS page
  36. 36.0 36.1 Hara, S et al. (2001) Expression and characterization of hypoxia-inducible factor (HIF)-3alpha in human kidney: suppression of HIF-mediated gene expression by HIF-3alpha. Biochem. Biophys. Res. Commun. 287 808-13 PubMed GONUTS page
  37. 37.0 37.1 Li, Y et al. (2009) HUMMR, a hypoxia- and HIF-1alpha-inducible protein, alters mitochondrial distribution and transport. J. Cell Biol. 185 1065-81 PubMed GONUTS page
  38. 38.0 38.1 Xu, D et al. (2010) Plk3 functions as an essential component of the hypoxia regulatory pathway by direct phosphorylation of HIF-1alpha. J. Biol. Chem. 285 38944-50 PubMed GONUTS page
  39. 39.0 39.1 Chen, B et al. (2010) Hypoxia downregulates p53 but induces apoptosis and enhances expression of BAD in cultures of human syncytiotrophoblasts. Am. J. Physiol., Cell Physiol. 299 C968-76 PubMed GONUTS page
  40. 40.0 40.1 Seo, KS et al. (2015) SIRT2 regulates tumour hypoxia response by promoting HIF-1α hydroxylation. Oncogene 34 1354-62 PubMed GONUTS page
  41. Stolze, I et al. (2002) Hypoxia-inducible erythropoietin gene expression in human neuroblastoma cells. Blood 100 2623-8 PubMed GONUTS page
  42. Mitani, T et al. (2011) Hypoxia enhances transcriptional activity of androgen receptor through hypoxia-inducible factor-1α in a low androgen environment. J. Steroid Biochem. Mol. Biol. 123 58-64 PubMed GONUTS page
  43. 43.0 43.1 Bhattacharya, S et al. (1999) Functional role of p35srj, a novel p300/CBP binding protein, during transactivation by HIF-1. Genes Dev. 13 64-75 PubMed GONUTS page
  44. 44.0 44.1 44.2 44.3 Kim, EJ et al. (2008) Transcriptional activation of HIF-1 by RORalpha and its role in hypoxia signaling. Arterioscler. Thromb. Vasc. Biol. 28 1796-802 PubMed GONUTS page
  45. 45.0 45.1 45.2 45.3 45.4 45.5 Kung, AL et al. (2004) Small molecule blockade of transcriptional coactivation of the hypoxia-inducible factor pathway. Cancer Cell 6 33-43 PubMed GONUTS page
  46. 46.0 46.1 Mahon, PC et al. (2001) FIH-1: a novel protein that interacts with HIF-1alpha and VHL to mediate repression of HIF-1 transcriptional activity. Genes Dev. 15 2675-86 PubMed GONUTS page
  47. 47.0 47.1 Li, Z et al. (2008) Correlation between the expression of divalent metal transporter 1 and the content of hypoxia-inducible factor-1 in hypoxic HepG2 cells. J. Cell. Mol. Med. 12 569-79 PubMed GONUTS page
  48. 48.0 48.1 48.2 48.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  49. 49.0 49.1 Hogenesch, JB et al. (1998) The basic-helix-loop-helix-PAS orphan MOP3 forms transcriptionally active complexes with circadian and hypoxia factors. Proc. Natl. Acad. Sci. U.S.A. 95 5474-9 PubMed GONUTS page
  50. Cheng, J et al. (2007) SUMO-specific protease 1 is essential for stabilization of HIF1alpha during hypoxia. Cell 131 584-95 PubMed GONUTS page
  51. 51.0 51.1 51.2 Woods, SL & Whitelaw, ML (2002) Differential activities of murine single minded 1 (SIM1) and SIM2 on a hypoxic response element. Cross-talk between basic helix-loop-helix/per-Arnt-Sim homology transcription factors. J. Biol. Chem. 277 10236-43 PubMed GONUTS page
  52. Hold, GL & El-Omar, EM (2008) Genetic aspects of inflammation and cancer. Biochem. J. 410 225-35 PubMed GONUTS page
  53. Chang, EI et al. (2007) Hypoxia, hormones, and endothelial progenitor cells in hemangioma. Lymphat Res Biol 5 237-43 PubMed GONUTS page