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Category:Team The Molecular Menace

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StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptableMOUSE:SPN90Mnbui2, Team The Molecular Menace2013-03-28 20:19:11 CDTGO:0010976 positive regulation of neuron projection development (P)PMID:21763308ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 6. When SPIN90 was knocked out, neurite outgrowth was inhibited. This was shown by comparing the length of the longest neurite and the length of shorter neurites of wild-type and of SPIN90 knocked-out hippocampal neurons.

challenge
acceptableBOVIN:BPT1Ayuan, Team The Molecular Menace2013-03-25 14:04:15 CDTGO:0090331 negative regulation of platelet aggregation (P)PMID:1378406ECO:0000314 direct assay evidence used in manual assertion

Fig. 5 shows the aggregation of human platelets was reduced by increasing concentration of aprotinin. Curve a was the control(without the presence of aprotinin)

challenge
acceptableMOUSE:MTORMnbui2, Team The Molecular Menace2013-03-25 11:22:38 CDTGO:0006207 'de novo' pyrimidine nucleobase biosynthetic process (P)PMID:23429704ECO:0000314 direct assay evidence used in manual assertion

Figure 2. HeLa cells exhibited a higher rate of de novo pyrimidine synthesis in the presence of growth factors and amino acids. It was then concluded that mTORC1 activates de novo pyrimidine synthesis.

challenge
acceptableMOUSE:OX2GMnbui2, Team The Molecular Menace2013-03-24 23:42:54 CDTGO:0043031 negative regulation of macrophage activation (P)PMID:11099416ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2. Macrophage populations were activated in CD200-/- mice. This was observed in the increase of CD11b+ population and lymph node macrophages, and the change to a thick, multi-cell layer of MOMA-1+.

challenge
acceptableBOVIN:BPT1Ayuan, Team The Molecular Menace2013-03-17 17:17:46 CDTGO:0070495 negative regulation of thrombin receptor signaling pathway (P)PMID:1378406ECO:0000314 direct assay evidence used in manual assertion

Fig. 4: Aprotinin inhibits the ability of thrombin to induce a fibrin clot. The fibrinogen concentration was contant at curve a while the clotting time increased from curve b to e with the presence of aprotinin

challenge
updatedbyinstructorBOMTE:VKTAyuan, Team The Molecular Menace2013-03-17 16:12:22 CDTGO:0004867 serine-type endopeptidase inhibitor activity (F)PMID:23164714ECO:0000314 direct assay evidence used in manual assertion

Figure 2B. Bt-KTI inhibits the enzymatic activity of trypsin

challenge
updatedbyinstructorBOMTE:VKTAyuan, Team The Molecular Menace2013-03-17 16:12:22 CDTGO:0051918 negative regulation of fibrinolysis (P)PMID:23164714ECO:0000314 direct assay evidence used in manual assertion

Fig 3: Bt-KTI inhibits plasmin formation

challenge
updatedbyinstructorPSETT:VKT1Ayuan, Team The Molecular Menace2013-03-15 14:54:02 CDTGO:0035899 negative regulation of blood coagulation in other organism (P)PMID:19236611ECO:0000314 direct assay evidence used in manual assertion

Fig. 1D: Textilinin-1 negatively regulated blood loss in a mouse tail vein model

challenge
acceptableMOUSE:GDPD5Mnbui2, Team The Molecular Menace2013-03-15 01:18:06 CDTGO:0045666 positive regulation of neuron differentiation (P)PMID:23329048ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1 (A to H). Lack of GDE2 in spinal cords of mice leads to a loss of spinal motor neurons (MN) and V0 interneurons.

challenge
updatedbyinstructorPSETT:VKT1Ayuan, Team The Molecular Menace2013-03-06 11:25:33 CSTGO:0004867 serine-type endopeptidase inhibitor activity (F)PMID:19236611ECO:0000314 direct assay evidence used in manual assertion

Table 1: textilinin-1 shows inhibition activity of plasmin and trypsin(low Ki values)

challenge
requireschangesPHAND:O74696Ayuan, Team The Molecular Menace2013-03-06 11:16:48 CSTGO:0052014 catabolism by symbiont of host protein (P)PMID:10796020ECO:0000314 direct assay evidence used in manual assertion

Fig. 5 shows SNP1 could degrade structural hydroxyproline-rich protein into small fragments.

challenge
acceptableMOUSE:RIF1Mnbui2, Team The Molecular Menace2013-03-04 21:01:55 CSTGO:2001034 positive regulation of double-strand break repair via nonhomologous end joining (P)PMID:23306437ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2 The rate and incidence of telomere fusions decrease in cells in the absence of Rif1. In the presence of Rif1, nonhomologous end joining is promoted, which leads to double-stranded break repair.

challenge
acceptableCHICK:GDPD5Mnbui2, Team The Molecular Menace2013-03-04 00:21:01 CSTGO:0045666 positive regulation of neuron differentiation (P)PMID:23329048ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1 (L to N). When GDE2 was overexpressed with Dll1 in chick spinal cords, GDE2's ability to induce neuron differentiation increased. This was shown by the increased Isl2+ motor neurons (red) in the presence of GDE2 and Dll1 compared to GDE2 by itself and Dll1 by itself.

challenge

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Pages in category "Team The Molecular Menace"

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