GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

Category:Team The Jackson 5

From GONUTS
Jump to: navigation, search
StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
unacceptableSTRPY:A0A0E1EP82Austin.Espe.1, Team The Jackson 52016-04-19 04:07:31 CDTGO:0008270 zinc ion binding (F)PMID:27031880ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3 shows knock-out adcA mutant grew significantly less than wild-type adcA in zinc-containing media.

challenge
unacceptableSTRPY:Q7DII5Austin.Espe.1, Team The Jackson 52016-04-19 03:59:43 CDTGO:0046872 metal ion binding (F)PMID:27031880ECO:0000315 mutant phenotype evidence used in manual assertion

Figures 4 shows wild-type lmb grew and knock-out lmb didn't grow in media containing ZnCl2.

challenge
unacceptableSTRPY:D4QE70Tiffany.Larson.1, Team The Jackson 52016-04-12 11:14:21 CDTGO:0050765 negative regulation of phagocytosis (P)PMID:26945067ECO:0000315 mutant phenotype evidence used in manual assertion

In Figure 3, the experiment shows that C3b is cleaved by the F1/FH complex which inhibits opsonization that is needed to induce phagocytosis.

challenge
unacceptableSTRPY:PAMMadeline.J.Arneson, Team The Jackson 52016-04-06 12:05:17 CDTGO:0050765 negative regulation of phagocytosis (P)PMID:26945067ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2

challenge
unacceptableSTRP1:SPEBAustin.Espe.1, Team The Jackson 52016-03-23 11:38:02 CDTGO:0009405 pathogenesis (P)PMID:26416912ECO:0000316 genetic interaction evidence used in manual assertion
challenge
unacceptableSTRP1:CAS9Liza.M.Stremick, Team The Jackson 52016-03-07 20:45:05 CSTGO:0050765 negative regulation of phagocytosis (P)PMID:26945067ECO:0000315 mutant phenotype evidence used in manual assertion

Streptococcus pyogenes uses Factor H to degrade C3B which is responsible for opsinization. This results in evading phagocytosis.

challenge
unacceptableSTRP3:TACYLiza.M.Stremick, Team The Jackson 52016-03-07 20:17:29 CSTGO:0008219 cell death (P)PMID:26838722ECO:0000315 mutant phenotype evidence used in manual assertion

Streptolysin o acts synergistically with NADase+ SPN to destroy cell membranes in infected cells and cause necrosis. In cells infected with mutant types of these proteins less then 10% of the cell membranes were destroyed.

challenge
unacceptableSTRPY:Q5R2E0Liza.M.Stremick, Team The Jackson 52016-03-07 20:12:02 CSTGO:0008219 cell death (P)PMID:26838722ECO:0000315 mutant phenotype evidence used in manual assertion

NADase acts synergistically with SLO to cause cell death in all essentially all of the cells they infect. Mutant forms of the protein only caused cell death in less then 10% of the infected cells.

challenge
unacceptableSTRR6:Q8DNW9Kassandra.Kompelien, Team The Jackson 52016-03-04 14:52:04 CSTGO:0098635 protein complex involved in cell-cell adhesion (C)PMID:23341464ECO:0000314 direct assay evidence used in manual assertion

Figure 9. Charts B, C, and D indicate bacteria lacking PepO gene had significantly less adherence, thus reducing rates of cell invasion and bacteria survival.

challenge
unacceptableSENDZ:FUSKassandra.Kompelien, Team The Jackson 52016-03-02 12:53:31 CSTGO:0009405 pathogenesis (P)PMID:26277251ECO:0000314 direct assay evidence used in manual assertion

Figure 2

Contributes to pathogenesis: associated with cell membrane fusion and attachment.

challenge
unacceptableSTRP6:HASC1Madeline.J.Arneson, Team The Jackson 52016-02-19 13:41:15 CSTGO:0009405 pathogenesis (P)PMID:21921933ECO:0000315 mutant phenotype evidence used in manual assertion

Table 2.

HasC1 aids in the production of a hyaluronic acid capsule. The capsule helps to evade phagocytosis.

challenge
unacceptableSTRPY:UDGMadeline.J.Arneson, Team The Jackson 52016-02-19 13:40:27 CSTGO:0009405 pathogenesis (P)PMID:21921933ECO:0000315 mutant phenotype evidence used in manual assertion

Table 2.

UDG aids in the production of the hyaluronic acid capsule which mimics hair connective tissue.

challenge
unacceptableSTRPY:HASAMadeline.J.Arneson, Team The Jackson 52016-02-19 13:39:34 CSTGO:0009405 pathogenesis (P)PMID:21921933ECO:0000315 mutant phenotype evidence used in manual assertion

Table 2.

HasA is involved in the production of the hyaluronic acid capsule. Hyaluronic acid mimics host connective tissue.

challenge
unacceptableSTRPQ:HASC2Madeline.J.Arneson, Team The Jackson 52016-02-19 13:38:43 CSTGO:0009405 pathogenesis (P)PMID:21921933ECO:0000315 mutant phenotype evidence used in manual assertion

Table 2.

HasC2 aids in the production of a hyaluronic acid capsule. The capsule helps to evade phagocytosis.

challenge
unacceptableSTRPY:HASAKassandra.Kompelien, Team The Jackson 52016-02-19 11:41:32 CSTGO:0009405 pathogenesis (P)PMID:23131832ECO:0000314 direct assay evidence used in manual assertion

Figure 2

Strep A species lack hasABC genes needed for hyaluronic acid capsule formation, which contributes to Strep species pathogenesis.

challenge
unacceptableSTREQ:TACYLiza.M.Stremick, Team The Jackson 52016-02-19 11:34:00 CSTGO:0060370 susceptibility to T cell mediated cytotoxicity (P)PMID:26601609ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 4

Analyzed various strains cytotoxic effects on keratinocytes.

challenge
unacceptableMOUSE:AB1IPMadeline.J.Arneson, Team The Jackson 52016-02-17 21:25:42 CSTGO:0033622 integrin activation (P)PMID:18363565ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2

challenge

What do the icons mean in the status column?

assessment icons.jpg

Pages in category "Team The Jackson 5"

The following 5 pages are in this category, out of 5 total.


Jump to pages starting with: A K L M T