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User:Bsanchez

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CACAO Spring 2014

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
unacceptableCANAL:HSP902014-01-29 16:22:31 CSTGO:0048523 negative regulation of cellular process (P)PMID:23300438ECO:0000314 direct assay evidence used in manual assertion

Hsf1 downregulats Hsp90 in C.albicans as shown in figure 1 by Western Blot

challenge
unacceptableCANAL:Q5AQ332014-01-29 16:26:05 CSTGO:0048523 negative regulation of cellular process (P)PMID:23300438ECO:0000314 direct assay evidence used in manual assertion

Hsf1 in C.albicans negatively regulates Hsp90 during heat shock. A Western Blot in Figure 1 showing heat shock induction and non-heat shock mRNA levels of Hsp90 in the presence of Hsf1

challenge
unacceptableCANAL:HSP902014-01-29 16:38:31 CSTGO:0048523 negative regulation of cellular process (P)PMID:23300438ECO:0000314 direct assay evidence used in manual assertion

Hsp90 in C. albicans down-regulates Hsp104 under heat shock conditions as shown in Figure 1. Hsp90 was depleted using doxycycline and mRNA levels were measured through Western Blot.

challenge
unacceptableCANAX:Q96W692014-01-29 16:41:05 CSTGO:0048523 negative regulation of cellular process (P)PMID:23300438ECO:0000314 direct assay evidence used in manual assertion

Hsp90 in C. albicans down-regulates Hsp104 under heat shock conditions as shown in Figure 1. Hsp90 was depleted using doxycycline and mRNA levels were measured through Western Blot.

challenge
unacceptableCANAL:HSP902014-01-29 16:59:29 CSTGO:0080135 regulation of cellular response to stress (P)PMID:23300438ECO:0000314 direct assay evidence used in manual assertion

Hsp90 in C. albicans regulates the stress response of the cells (heat shock and non-heat shock). In figure 8, Hsp90 was depleted from the cell using the drug doxycycline. When Hsp90 was depleted, the cells were less stress resistance. The stress resistance was measured by CFU (Colony-forming Unit) measurement.

challenge
unacceptableYEAST:MLP12014-01-31 14:44:41 CSTGO:0090202 gene looping (P)PMID:19933151ECO:0000314 direct assay evidence used in manual assertion

Mlp1 is required from gene loop maintenance during glucose shutdown as shown in Figure 1 through a PolII-ChIP analysis.

challenge

acceptable:0
unacceptable:6
requires_changes:0
flagged:0

Annotations challenged by Bsanchez

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
unacceptableAborel,
Team Schmowzow
HUMAN:IL8GO:0005153 - interleukin-8 receptor binding (F)PMID:24455739ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
requireschangesChong,
Team Kitten Me Right Meow
RAT:OXYRGO:0004990 - oxytocin receptor activity (F)PMID:22420322ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
unacceptableEturner,
Team BAMF
HUMAN:M3KL4GO:0031665 - negative regulation of lipopolysaccharide-mediated signaling pathway (P)PMID:21602844ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2
unacceptableAstephens2,
Team Bacon Pancakes
HUMAN:SHBGPMID:2587256ECO:0000247 sequence alignment evidence used in manual assertionchallengeC: 3
unacceptableCford,
Team What the Fox Says
HUMAN:BADGO:1990051 - activation of protein kinase C activity (P)PMID:9388241ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

0 annotations fixed by Bsanchez

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