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HUMAN:BRCA1

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) BRCA1 (synonyms: RNF53)
Protein Name(s) Breast cancer type 1 susceptibility protein

RING finger protein 53

External Links
UniProt P38398
EMBL U14680
L78833
U64805
AF005068
DQ190450
DQ190451
DQ190452
DQ190453
DQ190454
DQ190455
DQ190456
AY273801
AC060780
AC135721
BC072418
BC115037
CCDS CCDS11453.1
CCDS11454.2
CCDS11455.2
CCDS11456.2
CCDS11459.2
PIR A58881
RefSeq NP_009225.1
NP_009228.2
NP_009229.2
NP_009230.2
NP_009231.2
UniGene Hs.194143
PDB 1JM7
1JNX
1N5O
1OQA
1T15
1T29
1T2U
1T2V
1Y98
2ING
3COJ
3K0H
3K0K
3K15
3K16
3PXA
3PXB
3PXC
3PXD
3PXE
4IFI
4IGK
4JLU
4OFB
4U4A
4Y18
4Y2G
PDBsum 1JM7
1JNX
1N5O
1OQA
1T15
1T29
1T2U
1T2V
1Y98
2ING
3COJ
3K0H
3K0K
3K15
3K16
3PXA
3PXB
3PXC
3PXD
3PXE
4IFI
4IGK
4JLU
4OFB
4U4A
4Y18
4Y2G
DisProt DP00238
ProteinModelPortal P38398
SMR P38398
BioGrid 107140
DIP DIP-5971N
IntAct P38398
MINT MINT-90433
STRING 9606.ENSP00000418960
BindingDB P38398
ChEMBL CHEMBL5990
iPTMnet P38398
PhosphoSite P38398
BioMuta BRCA1
DMDM 728984
EPD P38398
PaxDb P38398
PRIDE P38398
DNASU 672
Ensembl ENST00000352993
ENST00000357654
ENST00000461221
ENST00000461798
ENST00000468300
ENST00000471181
ENST00000491747
ENST00000493795
GeneID 672
KEGG hsa:672
UCSC uc002icq.4
CTD 672
GeneCards BRCA1
GeneReviews BRCA1
HGNC HGNC:1100
HPA CAB001946
CAB018369
HPA034966
MalaCards BRCA1
MIM 113705
114480
167000
604370
614320
neXtProt NX_P38398
Orphanet 1333
1331
145
227535
213524
168829
PharmGKB PA25411
eggNOG ENOG410ITQ4
ENOG4112BIH
GeneTree ENSGT00440000034289
HOGENOM HOG000230969
HOVERGEN HBG050730
InParanoid P38398
KO K10605
OMA FQHLLFG
OrthoDB EOG79CXXK
PhylomeDB P38398
BRENDA 6.3.2.19
Reactome R-HSA-1221632
R-HSA-3108214
R-HSA-5685938
R-HSA-5685942
R-HSA-5693554
R-HSA-5693565
R-HSA-5693568
R-HSA-5693571
R-HSA-5693579
R-HSA-5693607
R-HSA-5693616
R-HSA-69473
R-HSA-912446
SignaLink P38398
UniPathway UPA00143
ChiTaRS BRCA1
EvolutionaryTrace P38398
GeneWiki BRCA1
GenomeRNAi 672
NextBio 2752
PMAP-CutDB P38398
PRO PR:P38398
Proteomes UP000005640
Bgee P38398
CleanEx HS_BRCA1
ExpressionAtlas P38398
Genevisible P38398
GO GO:0070531
GO:0031436
GO:0005694
GO:0000794
GO:0005737
GO:0008274
GO:0030529
GO:0005759
GO:0005654
GO:0005634
GO:0005886
GO:0043234
GO:0000151
GO:0050681
GO:0003682
GO:0003684
GO:0003677
GO:0019899
GO:0016874
GO:0003723
GO:0003713
GO:0044212
GO:0015631
GO:0031625
GO:0004842
GO:0008270
GO:0030521
GO:0006915
GO:0007420
GO:0044267
GO:0006974
GO:0071681
GO:0071356
GO:0007098
GO:0043009
GO:0031052
GO:0007059
GO:0006978
GO:0006281
GO:0006260
GO:0009048
GO:0006302
GO:0000724
GO:0006303
GO:0045003
GO:0006633
GO:0031572
GO:0008630
GO:0046600
GO:1902042
GO:0045717
GO:0035067
GO:0051572
GO:0051573
GO:0033147
GO:2000378
GO:0045892
GO:0045766
GO:0071158
GO:0045739
GO:0010628
GO:0035066
GO:0051571
GO:2000617
GO:0051574
GO:2000620
GO:0070512
GO:0033160
GO:0031398
GO:0045944
GO:0045893
GO:0010575
GO:0043687
GO:0006301
GO:0051865
GO:0085020
GO:0016925
GO:0016567
GO:0042981
GO:0042127
GO:0044030
GO:0006349
GO:0006357
GO:0006359
GO:0032355
GO:0043627
GO:0010212
GO:0007584
GO:0006351
Gene3D 3.30.40.10
3.40.50.10190
InterPro IPR011364
IPR031099
IPR025994
IPR001357
IPR018957
IPR001841
IPR013083
IPR017907
PANTHER PTHR13763
PTHR13763:SF0
Pfam PF00533
PF12820
PF00097
PIRSF PIRSF001734
PRINTS PR00493
SMART SM00292
SM00184
SUPFAM SSF52113
PROSITE PS50172
PS00518
PS50089

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0033147

negative regulation of intracellular estrogen receptor signaling pathway

PMID:17505062[1]

ECO:0000315

P

Figure 6 and 7 D. When BRCA1 is silenced in the presence of E2, there is an increase in the phosphorylation of ER-alpha receptor.

complete
CACAO 9376

GO:0005634

nucleus

PMID:23855721[2]

ECO:0000314

C

As seen in figure 3B, consecutive section of the normal tissue stained with the MS110 antibody showed strong epithelial cell nuclear staining.

complete
CACAO 8516

GO:0006302

double-strand break repair

PMID:22186889[3]

ECO:0000314

P

Figure 6c & 6d. Higher levels of γH2A.X signal for double strand break repair.

complete
CACAO 3909

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:9662397[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

PMID:9662397[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0070063

RNA polymerase binding

PMID:9662397[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0033147

negative regulation of intracellular estrogen receptor signaling pathway

PMID:17505062[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:20160719[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:20160719[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20160719[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:23855721[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

PMID:22186889[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010575

positive regulation of vascular endothelial growth factor production

PMID:23415688[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:23415688[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045766

positive regulation of angiogenesis

PMID:23415688[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002618)

Seeded From UniProt

complete

involved_in

GO:2000378

negative regulation of reactive oxygen species metabolic process

PMID:23415688[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002618)

Seeded From UniProt

complete

involved_in

GO:0071356

cellular response to tumor necrosis factor

PMID:23415688[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002618)

Seeded From UniProt

complete

involved_in

GO:1902042

negative regulation of extrinsic apoptotic signaling pathway via death domain receptors

PMID:23415688[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002618)

Seeded From UniProt

complete

involved_in

GO:2000620

positive regulation of histone H4-K16 acetylation

PMID:20820192[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000617

positive regulation of histone H3-K9 acetylation

PMID:20820192[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071158

positive regulation of cell cycle arrest

PMID:21102443[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0070512

positive regulation of histone H4-K20 methylation

PMID:20820192[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051573

negative regulation of histone H3-K9 methylation

PMID:20820192[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051571

positive regulation of histone H3-K4 methylation

PMID:20820192[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:20820192[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:20820192[7]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0035066

positive regulation of histone acetylation

PMID:20820192[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21282464[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0016567

protein ubiquitination

PMID:17349954[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006301

postreplication repair

PMID:17349954[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

PMID:17349954[10]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0000724

double-strand break repair via homologous recombination

PMID:17349954[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0085020

protein K6-linked ubiquitination

PMID:12890688[11]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0085020

protein K6-linked ubiquitination

PMID:20351172[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071681

cellular response to indole-3-methanol

PMID:10868478[13]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

PMID:19261749[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

PMID:19261748[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

PMID:17525342[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

PMID:17525340[17]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

PMID:17525341[18]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0051865

protein autoubiquitination

PMID:12890688[11]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051865

protein autoubiquitination

PMID:20351172[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0050681

androgen receptor binding

PMID:15572661[19]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0046600

negative regulation of centriole replication

PMID:12214252[20]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:16331276[21]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:15572661[19]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:16288014[22]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045739

positive regulation of DNA repair

PMID:19261748[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045739

positive regulation of DNA repair

PMID:17525340[17]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045739

positive regulation of DNA repair

PMID:17643121[23]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045717

negative regulation of fatty acid biosynthetic process

PMID:16326698[24]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043627

response to estrogen

PMID:8895509[25]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:9774970[26]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0031625

ubiquitin protein ligase binding

PMID:17873885[27]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P61086

F

Seeded From UniProt

complete

involved_in

GO:0072425

signal transduction involved in G2 DNA damage checkpoint

PMID:19261748[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0072425

signal transduction involved in G2 DNA damage checkpoint

PMID:17525340[17]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0072425

signal transduction involved in G2 DNA damage checkpoint

PMID:17643121[23]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

PMID:19117993[28]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

PMID:12890688[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

PMID:20351172[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

PMID:15265711[29]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0031398

positive regulation of protein ubiquitination

PMID:15965487[30]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0030521

androgen receptor signaling pathway

PMID:15572661[19]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:15965487[30]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P11388

F

Seeded From UniProt

complete

enables

GO:0015631

tubulin binding

PMID:12214252[20]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0010212

response to ionizing radiation

PMID:19261748[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010212

response to ionizing radiation

PMID:17525340[17]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010212

response to ionizing radiation

PMID:17643121[23]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0008274

gamma-tubulin ring complex

PMID:12214252[20]

ECO:0000303

author statement without traceable support used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0007059

chromosome segregation

PMID:15965487[30]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

PMID:19261748[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

PMID:17525340[17]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

PMID:17643121[23]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P48754

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:17643121[23]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:17525340[17]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

PMID:19117993[28]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

PMID:12890688[11]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

PMID:20351172[12]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

PMID:15572661[19]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0000151

ubiquitin ligase complex

PMID:14976165[31]

ECO:0000303

author statement without traceable support used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0071158

positive regulation of cell cycle arrest

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398

C

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349139
UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:0045717

negative regulation of fatty acid biosynthetic process

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:0043009

chordate embryonic development

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349142

P

Seeded From UniProt

complete

involved_in

GO:0035067

negative regulation of histone acetylation

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349139

P

Seeded From UniProt

complete

involved_in

GO:0035066

positive regulation of histone acetylation

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349139
UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398
WB:WBGene00000264

C

Seeded From UniProt

complete

involved_in

GO:0009048

dosage compensation by inactivation of X chromosome

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349142

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398

C

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
TAIR:locus:2133109
UniProtKB:P38398

F

Seeded From UniProt

complete

involved_in

GO:0000724

double-strand break repair via homologous recombination

PMID:21873635[32]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
TAIR:locus:2133109
UniProtKB:P38398
WB:WBGene00000264

P

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:18809582[33]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:9774970[26]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0008630

intrinsic apoptotic signaling pathway in response to DNA damage

PMID:14654789[34]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:12419249[35]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0000800

lateral element

PMID:9774970[26]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:8944023[36]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:29656893[37]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

involved_in

GO:2000620

positive regulation of histone H4-K16 acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:2000617

positive regulation of histone H3-K9 acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0070512

positive regulation of histone H4-K20 methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0051574

positive regulation of histone H3-K9 methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0051573

negative regulation of histone H3-K9 methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0051572

negative regulation of histone H3-K4 methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0051571

positive regulation of histone H3-K4 methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0044818

mitotic G2/M transition checkpoint

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

F

Seeded From UniProt

complete

involved_in

GO:0044030

regulation of DNA methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0043009

chordate embryonic development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0035067

negative regulation of histone acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0035066

positive regulation of histone acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0009048

dosage compensation by inactivation of X chromosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0007098

centrosome cycle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0006349

regulation of gene expression by genetic imprinting

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

C

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

C

Seeded From UniProt

complete

enables

GO:0003684

damaged DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

F

Seeded From UniProt

complete

part_of

GO:0000794

condensed nuclear chromosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

C

Seeded From UniProt

complete

part_of

GO:0000793

condensed chromosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P48754
ensembl:ENSMUSP00000017290

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364

F

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364

C

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364
InterPro:IPR031099

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR031099

P

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018957

F

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

PMID:8944023[36]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

PMID:10910365[38]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:10910365[38]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:9662397[4]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:10918303[39]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042981

regulation of apoptotic process

PMID:10918303[39]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042127

regulation of cell population proliferation

PMID:10918303[39]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006978

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

PMID:10918303[39]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006915

apoptotic process

PMID:10918303[39]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006359

regulation of transcription by RNA polymerase III

PMID:10918303[39]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1901796

regulation of signal transduction by p53 class mediator

Reactome:R-HSA-5633007

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0070317

negative regulation of G0 to G1 transition

Reactome:R-HSA-8953750

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016579

protein deubiquitination

Reactome:R-HSA-5688426

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006303

double-strand break repair via nonhomologous end joining

Reactome:R-HSA-5693571

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006260

DNA replication

Reactome:R-HSA-5684887
Reactome:R-HSA-5684875

ECO:0000304

author statement supported by traceable reference used in manual assertion


P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-HSA-9007605
Reactome:R-HSA-69891
Reactome:R-HSA-6799332
Reactome:R-HSA-6797712
Reactome:R-HSA-5693620
Reactome:R-HSA-5693608
Reactome:R-HSA-5693593
Reactome:R-HSA-5693589
Reactome:R-HSA-5693584
Reactome:R-HSA-5693580
Reactome:R-HSA-5693564
Reactome:R-HSA-5693561
Reactome:R-HSA-5693551
Reactome:R-HSA-5693542
Reactome:R-HSA-5693539
Reactome:R-HSA-5691411
Reactome:R-HSA-5686685
Reactome:R-HSA-5686657
Reactome:R-HSA-5686642
Reactome:R-HSA-5686483
Reactome:R-HSA-5686469
Reactome:R-HSA-5686440
Reactome:R-HSA-5686410
Reactome:R-HSA-5685994
Reactome:R-HSA-5685985
Reactome:R-HSA-5685838
Reactome:R-HSA-5685341
Reactome:R-HSA-5685156
Reactome:R-HSA-5685011
Reactome:R-HSA-5684887
Reactome:R-HSA-5684882
Reactome:R-HSA-5684875
Reactome:R-HSA-5684108
Reactome:R-HSA-5684071
Reactome:R-HSA-5684052
Reactome:R-HSA-5683801
Reactome:R-HSA-5683735
Reactome:R-HSA-5683385
Reactome:R-HSA-5659781
Reactome:R-HSA-2997709
Reactome:R-HSA-2997616

ECO:0000304

author statement supported by traceable reference used in manual assertion









































C

Seeded From UniProt

complete

involved_in

GO:0000729

DNA double-strand break processing

Reactome:R-HSA-5693608

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006631

fatty acid metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0276

P

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0233

P

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

involved_in

GO:0006633

fatty acid biosynthetic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0275

P

Seeded From UniProt

complete

involved_in

GO:0006629

lipid metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0443

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0007049

cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0131

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

involved_in

GO:0016567

protein ubiquitination

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00143

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Ma, Y et al. (2007) Growth factor signaling pathways modulate BRCA1 repression of estrogen receptor-alpha activity. Mol. Endocrinol. 21 1905-23 PubMed GONUTS page
  2. 2.0 2.1 Tulchin, N et al. (2013) Localization of BRCA1 protein in breast cancer tissue and cell lines with mutations. Cancer Cell Int. 13 70 PubMed GONUTS page
  3. 3.0 3.1 Shukla, PC et al. (2011) BRCA1 is an essential regulator of heart function and survival following myocardial infarction. Nat Commun 2 593 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 Anderson, SF et al. (1998) BRCA1 protein is linked to the RNA polymerase II holoenzyme complex via RNA helicase A. Nat. Genet. 19 254-6 PubMed GONUTS page
  5. 5.0 5.1 5.2 Hiraike, H et al. (2010) Identification of DBC1 as a transcriptional repressor for BRCA1. Br. J. Cancer 102 1061-7 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 6.4 6.5 Singh, KK et al. (2013) BRCA1 is a novel target to improve endothelial dysfunction and retard atherosclerosis. J. Thorac. Cardiovasc. Surg. 146 949-960.e4 PubMed GONUTS page
  7. 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 Shukla, V et al. (2010) BRCA1 affects global DNA methylation through regulation of DNMT1. Cell Res. 20 1201-15 PubMed GONUTS page
  8. Di, LJ et al. (2010) Transcriptional regulation of BRCA1 expression by a metabolic switch. Nat. Struct. Mol. Biol. 17 1406-13 PubMed GONUTS page
  9. Coene, ED et al. (2011) A novel role for BRCA1 in regulating breast cancer cell spreading and motility. J. Cell Biol. 192 497-512 PubMed GONUTS page
  10. 10.0 10.1 10.2 10.3 Zhao, GY et al. (2007) A critical role for the ubiquitin-conjugating enzyme Ubc13 in initiating homologous recombination. Mol. Cell 25 663-75 PubMed GONUTS page
  11. 11.0 11.1 11.2 11.3 Wu-Baer, F et al. (2003) The BRCA1/BARD1 heterodimer assembles polyubiquitin chains through an unconventional linkage involving lysine residue K6 of ubiquitin. J. Biol. Chem. 278 34743-6 PubMed GONUTS page
  12. 12.0 12.1 12.2 12.3 Wu-Baer, F et al. (2010) The UBXN1 protein associates with autoubiquitinated forms of the BRCA1 tumor suppressor and inhibits its enzymatic function. Mol. Cell. Biol. 30 2787-98 PubMed GONUTS page
  13. Meng, Q et al. (2000) Suppression of breast cancer invasion and migration by indole-3-carbinol: associated with up-regulation of BRCA1 and E-cadherin/catenin complexes. J. Mol. Med. 78 155-65 PubMed GONUTS page
  14. Wang, B et al. (2009) NBA1, a new player in the Brca1 A complex, is required for DNA damage resistance and checkpoint control. Genes Dev. 23 729-39 PubMed GONUTS page
  15. 15.0 15.1 15.2 15.3 15.4 Feng, L et al. (2009) MERIT40 facilitates BRCA1 localization and DNA damage repair. Genes Dev. 23 719-28 PubMed GONUTS page
  16. Kim, H et al. (2007) Ubiquitin-binding protein RAP80 mediates BRCA1-dependent DNA damage response. Science 316 1202-5 PubMed GONUTS page
  17. 17.0 17.1 17.2 17.3 17.4 17.5 Wang, B et al. (2007) Abraxas and RAP80 form a BRCA1 protein complex required for the DNA damage response. Science 316 1194-8 PubMed GONUTS page
  18. Sobhian, B et al. (2007) RAP80 targets BRCA1 to specific ubiquitin structures at DNA damage sites. Science 316 1198-202 PubMed GONUTS page
  19. 19.0 19.1 19.2 19.3 Lin, DY et al. (2004) Negative modulation of androgen receptor transcriptional activity by Daxx. Mol. Cell. Biol. 24 10529-41 PubMed GONUTS page
  20. 20.0 20.1 20.2 Deng, CX (2002) Roles of BRCA1 in centrosome duplication. Oncogene 21 6222-7 PubMed GONUTS page
  21. Williamson, EA et al. (2006) BRCA1 and FOXA1 proteins coregulate the expression of the cell cycle-dependent kinase inhibitor p27(Kip1). Oncogene 25 1391-9 PubMed GONUTS page
  22. Kennedy, RD et al. (2005) BRCA1 and c-Myc associate to transcriptionally repress psoriasin, a DNA damage-inducible gene. Cancer Res. 65 10265-72 PubMed GONUTS page
  23. 23.0 23.1 23.2 23.3 23.4 Liu, Z et al. (2007) CCDC98 targets BRCA1 to DNA damage sites. Nat. Struct. Mol. Biol. 14 716-20 PubMed GONUTS page
  24. Moreau, K et al. (2006) BRCA1 affects lipid synthesis through its interaction with acetyl-CoA carboxylase. J. Biol. Chem. 281 3172-81 PubMed GONUTS page
  25. Spillman, MA & Bowcock, AM (1996) BRCA1 and BRCA2 mRNA levels are coordinately elevated in human breast cancer cells in response to estrogen. Oncogene 13 1639-45 PubMed GONUTS page
  26. 26.0 26.1 26.2 Chen, J et al. (1998) Stable interaction between the products of the BRCA1 and BRCA2 tumor suppressor genes in mitotic and meiotic cells. Mol. Cell 2 317-28 PubMed GONUTS page
  27. Christensen, DE et al. (2007) E2-BRCA1 RING interactions dictate synthesis of mono- or specific polyubiquitin chain linkages. Nat. Struct. Mol. Biol. 14 941-8 PubMed GONUTS page
  28. 28.0 28.1 Nishikawa, H et al. (2009) BRCA1-associated protein 1 interferes with BRCA1/BARD1 RING heterodimer activity. Cancer Res. 69 111-9 PubMed GONUTS page
  29. Fabbro, M et al. (2004) BARD1 regulates BRCA1 apoptotic function by a mechanism involving nuclear retention. Exp. Cell Res. 298 661-73 PubMed GONUTS page
  30. 30.0 30.1 30.2 Lou, Z et al. (2005) BRCA1 participates in DNA decatenation. Nat. Struct. Mol. Biol. 12 589-93 PubMed GONUTS page
  31. Morris, JR & Solomon, E (2004) BRCA1 : BARD1 induces the formation of conjugated ubiquitin structures, dependent on K6 of ubiquitin, in cells during DNA replication and repair. Hum. Mol. Genet. 13 807-17 PubMed GONUTS page
  32. 32.00 32.01 32.02 32.03 32.04 32.05 32.06 32.07 32.08 32.09 32.10 32.11 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  33. Maggi, LB Jr et al. (2008) Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome. Mol. Cell. Biol. 28 7050-65 PubMed GONUTS page
  34. Aglipay, JA et al. (2003) A member of the Pyrin family, IFI16, is a novel BRCA1-associated protein involved in the p53-mediated apoptosis pathway. Oncogene 22 8931-8 PubMed GONUTS page
  35. Ganesan, S et al. (2002) BRCA1 supports XIST RNA concentration on the inactive X chromosome. Cell 111 393-405 PubMed GONUTS page
  36. 36.0 36.1 Wu, LC et al. (1996) Identification of a RING protein that can interact in vivo with the BRCA1 gene product. Nat. Genet. 14 430-40 PubMed GONUTS page
  37. Gupta, R et al. (2018) DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity. Cell 173 972-988.e23 PubMed GONUTS page
  38. 38.0 38.1 Li, S et al. (2000) Functional link of BRCA1 and ataxia telangiectasia gene product in DNA damage response. Nature 406 210-5 PubMed GONUTS page
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