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HUMAN:BRCA1
Contents
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0033147 |
negative regulation of intracellular estrogen receptor signaling pathway |
ECO:0000315 |
P |
Figure 6 and 7 D. When BRCA1 is silenced in the presence of E2, there is an increase in the phosphorylation of ER-alpha receptor. |
complete | |||||
GO:0005634 |
nucleus |
ECO:0000314 |
C |
As seen in figure 3B, consecutive section of the normal tissue stained with the MS110 antibody showed strong epithelial cell nuclear staining. |
complete | |||||
GO:0006302 |
double-strand break repair |
ECO:0000314 |
P |
Figure 6c & 6d. Higher levels of γH2A.X signal for double strand break repair. |
complete | |||||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003713 |
transcription coactivator activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0070063 |
RNA polymerase binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033147 |
negative regulation of intracellular estrogen receptor signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010575 |
positive regulation of vascular endothelial growth factor production |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0045766 |
positive regulation of angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002618) |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000378 |
negative regulation of reactive oxygen species metabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002618) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071356 |
cellular response to tumor necrosis factor |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002618) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1902042 |
negative regulation of extrinsic apoptotic signaling pathway via death domain receptors |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002618) |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000620 |
positive regulation of histone H4-K16 acetylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000617 |
positive regulation of histone H3-K9 acetylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071158 |
positive regulation of cell cycle arrest |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070512 |
positive regulation of histone H4-K20 methylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051573 |
negative regulation of histone H3-K9 methylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051571 |
positive regulation of histone H3-K4 methylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035066 |
positive regulation of histone acetylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006301 |
postreplication repair |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0085020 |
protein K6-linked ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0085020 |
protein K6-linked ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071681 |
cellular response to indole-3-methanol |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051865 |
protein autoubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051865 |
protein autoubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0050681 |
androgen receptor binding |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046600 |
negative regulation of centriole replication |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045739 |
positive regulation of DNA repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045739 |
positive regulation of DNA repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045739 |
positive regulation of DNA repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045717 |
negative regulation of fatty acid biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043627 |
response to estrogen |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0072425 |
signal transduction involved in G2 DNA damage checkpoint |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0072425 |
signal transduction involved in G2 DNA damage checkpoint |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0072425 |
signal transduction involved in G2 DNA damage checkpoint |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0031398 |
positive regulation of protein ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030521 |
androgen receptor signaling pathway |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0019899 |
enzyme binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0015631 |
tubulin binding |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010212 |
response to ionizing radiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010212 |
response to ionizing radiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010212 |
response to ionizing radiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0008274 |
gamma-tubulin ring complex |
ECO:0000303 |
author statement without traceable support used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007059 |
chromosome segregation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003713 |
transcription coactivator activity |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000151 |
ubiquitin ligase complex |
ECO:0000303 |
author statement without traceable support used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071158 |
positive regulation of cell cycle arrest |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045717 |
negative regulation of fatty acid biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043009 |
chordate embryonic development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035067 |
negative regulation of histone acetylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035066 |
positive regulation of histone acetylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009048 |
dosage compensation by inactivation of X chromosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008630 |
intrinsic apoptotic signaling pathway in response to DNA damage |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000800 |
lateral element |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000620 |
positive regulation of histone H4-K16 acetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000617 |
positive regulation of histone H3-K9 acetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070512 |
positive regulation of histone H4-K20 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051574 |
positive regulation of histone H3-K9 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051573 |
negative regulation of histone H3-K9 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051572 |
negative regulation of histone H3-K4 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051571 |
positive regulation of histone H3-K4 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0044818 |
mitotic G2/M transition checkpoint |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0044030 |
regulation of DNA methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043009 |
chordate embryonic development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035067 |
negative regulation of histone acetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035066 |
positive regulation of histone acetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009048 |
dosage compensation by inactivation of X chromosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007098 |
centrosome cycle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006349 |
regulation of gene expression by genetic imprinting |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005694 |
chromosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003684 |
damaged DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000794 |
condensed nuclear chromosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000793 |
condensed chromosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P48754 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042981 |
regulation of apoptotic process |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042127 |
regulation of cell population proliferation |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006978 |
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006915 |
apoptotic process |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006359 |
regulation of transcription by RNA polymerase III |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1901796 |
regulation of signal transduction by p53 class mediator |
Reactome:R-HSA-5633007 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070317 |
negative regulation of G0 to G1 transition |
Reactome:R-HSA-8953750 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016579 |
protein deubiquitination |
Reactome:R-HSA-5688426 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
Reactome:R-HSA-5693571 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006260 |
DNA replication |
Reactome:R-HSA-5684887 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
P |
Seeded From UniProt |
complete | |
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-9007605 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0000729 |
DNA double-strand break processing |
Reactome:R-HSA-5693608 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006631 |
fatty acid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006633 |
fatty acid biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007049 |
cell cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00143 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Ma, Y et al. (2007) Growth factor signaling pathways modulate BRCA1 repression of estrogen receptor-alpha activity. Mol. Endocrinol. 21 1905-23 PubMed GONUTS page
- ↑ 2.0 2.1 Tulchin, N et al. (2013) Localization of BRCA1 protein in breast cancer tissue and cell lines with mutations. Cancer Cell Int. 13 70 PubMed GONUTS page
- ↑ 3.0 3.1 Shukla, PC et al. (2011) BRCA1 is an essential regulator of heart function and survival following myocardial infarction. Nat Commun 2 593 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Anderson, SF et al. (1998) BRCA1 protein is linked to the RNA polymerase II holoenzyme complex via RNA helicase A. Nat. Genet. 19 254-6 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Hiraike, H et al. (2010) Identification of DBC1 as a transcriptional repressor for BRCA1. Br. J. Cancer 102 1061-7 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 6.4 6.5 Singh, KK et al. (2013) BRCA1 is a novel target to improve endothelial dysfunction and retard atherosclerosis. J. Thorac. Cardiovasc. Surg. 146 949-960.e4 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 Shukla, V et al. (2010) BRCA1 affects global DNA methylation through regulation of DNMT1. Cell Res. 20 1201-15 PubMed GONUTS page
- ↑ Di, LJ et al. (2010) Transcriptional regulation of BRCA1 expression by a metabolic switch. Nat. Struct. Mol. Biol. 17 1406-13 PubMed GONUTS page
- ↑ Coene, ED et al. (2011) A novel role for BRCA1 in regulating breast cancer cell spreading and motility. J. Cell Biol. 192 497-512 PubMed GONUTS page
- ↑ 10.0 10.1 10.2 10.3 Zhao, GY et al. (2007) A critical role for the ubiquitin-conjugating enzyme Ubc13 in initiating homologous recombination. Mol. Cell 25 663-75 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 11.3 Wu-Baer, F et al. (2003) The BRCA1/BARD1 heterodimer assembles polyubiquitin chains through an unconventional linkage involving lysine residue K6 of ubiquitin. J. Biol. Chem. 278 34743-6 PubMed GONUTS page
- ↑ 12.0 12.1 12.2 12.3 Wu-Baer, F et al. (2010) The UBXN1 protein associates with autoubiquitinated forms of the BRCA1 tumor suppressor and inhibits its enzymatic function. Mol. Cell. Biol. 30 2787-98 PubMed GONUTS page
- ↑ Meng, Q et al. (2000) Suppression of breast cancer invasion and migration by indole-3-carbinol: associated with up-regulation of BRCA1 and E-cadherin/catenin complexes. J. Mol. Med. 78 155-65 PubMed GONUTS page
- ↑ Wang, B et al. (2009) NBA1, a new player in the Brca1 A complex, is required for DNA damage resistance and checkpoint control. Genes Dev. 23 729-39 PubMed GONUTS page
- ↑ 15.0 15.1 15.2 15.3 15.4 Feng, L et al. (2009) MERIT40 facilitates BRCA1 localization and DNA damage repair. Genes Dev. 23 719-28 PubMed GONUTS page
- ↑ Kim, H et al. (2007) Ubiquitin-binding protein RAP80 mediates BRCA1-dependent DNA damage response. Science 316 1202-5 PubMed GONUTS page
- ↑ 17.0 17.1 17.2 17.3 17.4 17.5 Wang, B et al. (2007) Abraxas and RAP80 form a BRCA1 protein complex required for the DNA damage response. Science 316 1194-8 PubMed GONUTS page
- ↑ Sobhian, B et al. (2007) RAP80 targets BRCA1 to specific ubiquitin structures at DNA damage sites. Science 316 1198-202 PubMed GONUTS page
- ↑ 19.0 19.1 19.2 19.3 Lin, DY et al. (2004) Negative modulation of androgen receptor transcriptional activity by Daxx. Mol. Cell. Biol. 24 10529-41 PubMed GONUTS page
- ↑ 20.0 20.1 20.2 Deng, CX (2002) Roles of BRCA1 in centrosome duplication. Oncogene 21 6222-7 PubMed GONUTS page
- ↑ Williamson, EA et al. (2006) BRCA1 and FOXA1 proteins coregulate the expression of the cell cycle-dependent kinase inhibitor p27(Kip1). Oncogene 25 1391-9 PubMed GONUTS page
- ↑ Kennedy, RD et al. (2005) BRCA1 and c-Myc associate to transcriptionally repress psoriasin, a DNA damage-inducible gene. Cancer Res. 65 10265-72 PubMed GONUTS page
- ↑ 23.0 23.1 23.2 23.3 23.4 Liu, Z et al. (2007) CCDC98 targets BRCA1 to DNA damage sites. Nat. Struct. Mol. Biol. 14 716-20 PubMed GONUTS page
- ↑ Moreau, K et al. (2006) BRCA1 affects lipid synthesis through its interaction with acetyl-CoA carboxylase. J. Biol. Chem. 281 3172-81 PubMed GONUTS page
- ↑ Spillman, MA & Bowcock, AM (1996) BRCA1 and BRCA2 mRNA levels are coordinately elevated in human breast cancer cells in response to estrogen. Oncogene 13 1639-45 PubMed GONUTS page
- ↑ 26.0 26.1 26.2 Chen, J et al. (1998) Stable interaction between the products of the BRCA1 and BRCA2 tumor suppressor genes in mitotic and meiotic cells. Mol. Cell 2 317-28 PubMed GONUTS page
- ↑ Christensen, DE et al. (2007) E2-BRCA1 RING interactions dictate synthesis of mono- or specific polyubiquitin chain linkages. Nat. Struct. Mol. Biol. 14 941-8 PubMed GONUTS page
- ↑ 28.0 28.1 Nishikawa, H et al. (2009) BRCA1-associated protein 1 interferes with BRCA1/BARD1 RING heterodimer activity. Cancer Res. 69 111-9 PubMed GONUTS page
- ↑ Fabbro, M et al. (2004) BARD1 regulates BRCA1 apoptotic function by a mechanism involving nuclear retention. Exp. Cell Res. 298 661-73 PubMed GONUTS page
- ↑ 30.0 30.1 30.2 Lou, Z et al. (2005) BRCA1 participates in DNA decatenation. Nat. Struct. Mol. Biol. 12 589-93 PubMed GONUTS page
- ↑ Morris, JR & Solomon, E (2004) BRCA1 : BARD1 induces the formation of conjugated ubiquitin structures, dependent on K6 of ubiquitin, in cells during DNA replication and repair. Hum. Mol. Genet. 13 807-17 PubMed GONUTS page
- ↑ 32.00 32.01 32.02 32.03 32.04 32.05 32.06 32.07 32.08 32.09 32.10 32.11 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Maggi, LB Jr et al. (2008) Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome. Mol. Cell. Biol. 28 7050-65 PubMed GONUTS page
- ↑ Aglipay, JA et al. (2003) A member of the Pyrin family, IFI16, is a novel BRCA1-associated protein involved in the p53-mediated apoptosis pathway. Oncogene 22 8931-8 PubMed GONUTS page
- ↑ Ganesan, S et al. (2002) BRCA1 supports XIST RNA concentration on the inactive X chromosome. Cell 111 393-405 PubMed GONUTS page
- ↑ 36.0 36.1 Wu, LC et al. (1996) Identification of a RING protein that can interact in vivo with the BRCA1 gene product. Nat. Genet. 14 430-40 PubMed GONUTS page
- ↑ Gupta, R et al. (2018) DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity. Cell 173 972-988.e23 PubMed GONUTS page
- ↑ 38.0 38.1 Li, S et al. (2000) Functional link of BRCA1 and ataxia telangiectasia gene product in DNA damage response. Nature 406 210-5 PubMed GONUTS page
- ↑ 39.0 39.1 39.2 39.3 39.4 39.5 Deng, CX & Brodie, SG (2000) Roles of BRCA1 and its interacting proteins. Bioessays 22 728-37 PubMed GONUTS page
c
- Catarrhini
- GO:0071356 ! cellular response to tumor necrosis factor
- GO:0071681 ! cellular response to indole-3-methanol
- GO:0007049 ! cell cycle
- GO:0007098 ! centrosome cycle
- Chordata
- GO:0043009 ! chordate embryonic development
- GO:0005694 ! chromosome
- GO:0007059 ! chromosome segregation
- GO:0000793 ! condensed chromosome
- GO:0000794 ! condensed nuclear chromosome
- Craniata
- GO:0005737 ! cytoplasm
d
- GO:0003684 ! damaged DNA binding
- GO:0003677 ! DNA binding
- GO:0006974 ! DNA damage response
- GO:0000729 ! DNA double-strand break processing
- GO:0006310 ! DNA recombination
- GO:0006281 ! DNA repair
- GO:0006260 ! DNA replication
- GO:0009048 ! dosage compensation by inactivation of X chromosome
- GO:0006302 ! double-strand break repair
- GO:0006303 ! double-strand break repair via nonhomologous end joining
- GO:0000724 ! double-strand break repair via homologous recombination
i
n
- GO:0033147 ! negative regulation of intracellular estrogen receptor signaling pathway
- GO:0070317 ! negative regulation of G0 to G1 transition
- GO:1902042 ! negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
- GO:0045717 ! negative regulation of fatty acid biosynthetic process
- GO:2000378 ! negative regulation of reactive oxygen species metabolic process
- GO:0045892 ! negative regulation of DNA-templated transcription
- GO:0046600 ! negative regulation of centriole replication
- GO:0050681 ! nuclear androgen receptor binding
- GO:0005654 ! nucleoplasm
- GO:0005634 ! nucleus
o
- GO:0006978 ! obsolete DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
- GO:0035067 ! obsolete negative regulation of histone acetylation
- GO:0051572 ! obsolete negative regulation of histone H3-K4 methylation
- GO:0051573 ! obsolete negative regulation of histone H3-K9 methylation
- GO:2000620 ! obsolete positive regulation of histone H4-K16 acetylation
- GO:2000617 ! obsolete positive regulation of histone H3-K9 acetylation
- GO:0070512 ! obsolete positive regulation of histone H4-K20 methylation
- GO:0051574 ! obsolete positive regulation of histone H3-K9 methylation
- GO:0051571 ! obsolete positive regulation of histone H3-K4 methylation
- GO:0035066 ! obsolete positive regulation of histone acetylation
- GO:0006349 ! obsolete regulation of gene expression by genomic imprinting
- GO:0044030 ! obsolete regulation of DNA methylation
p
- GO:0005886 ! plasma membrane
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0031398 ! positive regulation of protein ubiquitination
- GO:0010628 ! positive regulation of gene expression
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0045766 ! positive regulation of angiogenesis
- GO:0071158 ! positive regulation of cell cycle arrest
- GO:0010575 ! positive regulation of vascular endothelial growth factor production
- GO:0045739 ! positive regulation of DNA repair
- GO:0006301 ! postreplication repair
- Primates
- GO:0032991 ! protein-containing complex
- GO:0051865 ! protein autoubiquitination
- GO:0016579 ! protein deubiquitination
- GO:0085020 ! protein K6-linked ubiquitination
- GO:0016567 ! protein ubiquitination
r
- GO:0006357 ! regulation of transcription by RNA polymerase II
- GO:0042981 ! regulation of apoptotic process
- GO:1901796 ! regulation of signal transduction by p53 class mediator
- GO:0006359 ! regulation of transcription by RNA polymerase III
- GO:0042127 ! regulation of cell population proliferation
- GO:0043627 ! response to estrogen
- GO:0010212 ! response to ionizing radiation
- GO:1990904 ! ribonucleoprotein complex
- GO:0003723 ! RNA binding
- GO:0070063 ! RNA polymerase binding
t
u