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Category:Team Kary Mullis

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StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
BACSU:KINAEl001607, Team Kary Mullis2019-07-23 16:15:23 CDTGO:0016301 kinase activity (F)PMID:16166384ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1 shows that inducing the synthesis of KinA during growth triggers efficient sporulation.

challenge
requireschangesECOLI:THIEHo701667, Team Kary Mullis2012-04-15 16:51:38 CDTGO:0009228 thiamine biosynthetic process (P)PMID:8432721ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3

challenge
acceptableBACSU:KINAEl001607, Team Kary Mullis2012-04-14 23:35:02 CDTGO:0030435 sporulation resulting in formation of a cellular spore (P)PMID:16166384ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 4 shows KinA synthesis triggers sporulation early in the exponential phase of growth.

challenge
requireschangesBACSU:SIRAEl001607, Team Kary Mullis2012-04-14 23:14:37 CDTGO:0008156 negative regulation of DNA replication (P)PMID:21239581ECO:0000315 mutant phenotype evidence used in manual assertion

Fig. 5 indicates that SirA reduces the amount of wild-type but not mutant DnaA bound at the origin of replication. Therefore this results indicate that interaction of SirA contacts DnaA at a patch of 3 residues located on the surface of domain I of the replication initiator protein and inhibits the ability of DNA to bind to the origin of replication.

challenge
requireschangesBACSU:FENR2El001607, Team Kary Mullis2012-04-14 22:10:18 CDTGO:0055114 oxidation-reduction process (P)PMID:20878669ECO:0000314 direct assay evidence used in manual assertion

NADPH-binding domain must rotate 60° relative to the FAD-binding domain in order for hydride (movement of electrons and protons) transfer to take place as seen as figure 2d.

challenge
acceptableECOLI:TRKGHo701667, Team Kary Mullis2012-04-14 16:50:27 CDTGO:0015388 potassium uptake transmembrane transporter activity (F)PMID:1987159ECO:0000315 mutant phenotype evidence used in manual assertion

Table 4

challenge
requireschangesECOLI:KUPHo701667, Team Kary Mullis2012-04-14 16:40:10 CDTGO:0043266 regulation of potassium ion transport (P)PMID:2649491ECO:0000314 direct assay evidence used in manual assertion

Figure 1

challenge
requireschangesECOLI:TRKAHo701667, Team Kary Mullis2012-04-14 16:33:56 CDTGO:0043266 regulation of potassium ion transport (P)PMID:2674131ECO:0000314 direct assay evidence used in manual assertion

Figure 4. Immunoblot

challenge
requireschangesECOLI:OPPAHo701667, Team Kary Mullis2012-04-14 16:24:16 CDTGO:0006857 oligopeptide transport (P)PMID:3080404ECO:0000315 mutant phenotype evidence used in manual assertion

Table 4. Table 5

challenge
requireschangesECOLI:OPPDHo701667, Team Kary Mullis2012-04-14 16:18:46 CDTGO:0006857 oligopeptide transport (P)PMID:3080404ECO:0000315 mutant phenotype evidence used in manual assertion

Table 4. Table 5

challenge
requireschangesECOLI:OPPBHo701667, Team Kary Mullis2012-04-14 16:15:53 CDTGO:0006857 oligopeptide transport (P)PMID:3080404ECO:0000315 mutant phenotype evidence used in manual assertion

Table 4. Table 5

challenge
requireschangesECOLI:TYRBHo701667, Team Kary Mullis2012-04-14 15:29:40 CDTGO:0070547 L-tyrosine aminotransferase activity (F)PMID:3072020ECO:0000315 mutant phenotype evidence used in manual assertion

"The refined crystallographic structure of the "closed" conformation of chicken mitochondrial aspartate aminotransferase has been used as a template for the construction of models of the two Escherichia coli aminotransferases encoded by the tyrB and aspC genes"

challenge
requireschangesBACSU:TRMFOEl001607, Team Kary Mullis2012-04-14 12:36:00 CDTGO:0008168 methyltransferase activity (F)PMID:2461858ECO:0000314 direct assay evidence used in manual assertion

Figure 4 indicates the purified Gid protein catalyzes the site-specific formation of m5U-54 in [32P]-labeled yeast tRNAAsp transcript.

challenge
requireschangesBACSU:TRMFOEl001607, Team Kary Mullis2012-04-14 12:04:28 CDTGO:0008168 methyltransferase activity (F)PMID:16027442ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2A and B indicate that the wild type cell extract was able to catalyze formation of m^5U-54 in vitro, however the mutant strain lacking the functional Gid protein was unable to catalyze such a methylation reaction. Thus this indicates that the gid gene product is involved in product of m^5Y-54 in tRNA.

challenge
requireschangesECOLX:F4M1R7Ho701667, Team Kary Mullis2012-04-12 19:00:59 CDTGO:0009360 DNA polymerase III complex (C)PMID:8505303ECO:0000247 sequence alignment evidence used in manual assertion

Figure 6.

challenge
requireschangesECOLI:REPHo701667, Team Kary Mullis2012-04-12 18:59:14 CDTGO:0003678 DNA helicase activity (F)PMID:2524489ECO:0000247 sequence alignment evidence used in manual assertion

Figure 4

challenge
requireschangesPEDPE:MURIEl001607, Team Kary Mullis2012-04-09 13:20:33 CDTGO:0016853 isomerase activity (F)PMID:1358877ECO:0000269 experimental evidence used in manual assertion

Figure 1 indicates a decrease in optical rotation as a results of a structural change observed in the alpha position of the L-glutamate substrate. This results are observed during the incubation with glutamate racemase in deuterium oxide.

challenge
requireschangesAZOVI:Q9KIB6El001607, Team Kary Mullis2012-04-01 13:01:58 CDTGO:0045893 positive regulation of transcription, DNA-dependent (P)PMID:10940024ECO:0000316 genetic interaction evidence used in manual assertion

Figure 2

challenge

Pages in category "Team Kary Mullis"

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