User:El001607

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
requireschanges	AZOVI:Q9KIB6	2012-04-01 13:01:58 CDT	GO:0045893 positive regulation of transcription, DNA-dependent (P)	PMID:10940024	ECO:0000316 genetic interaction evidence used in manual assertion	Figure 2	challenge
requireschanges	PEDPE:MURI	2012-04-09 13:20:33 CDT	GO:0016853 isomerase activity (F)	PMID:1358877	ECO:0000269 experimental evidence used in manual assertion	Figure 1 indicates a decrease in optical rotation as a results of a structural change observed in the alpha position of the L-glutamate substrate. This results are observed during the incubation with glutamate racemase in deuterium oxide.	challenge
requireschanges	BACSU:TRMFO	2012-04-14 12:04:28 CDT	GO:0008168 methyltransferase activity (F)	PMID:16027442	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2A and B indicate that the wild type cell extract was able to catalyze formation of m^5U-54 in vitro, however the mutant strain lacking the functional Gid protein was unable to catalyze such a methylation reaction. Thus this indicates that the gid gene product is involved in product of m^5Y-54 in tRNA.	challenge
requireschanges	BACSU:TRMFO	2012-04-14 12:36:00 CDT	GO:0008168 methyltransferase activity (F)	PMID:2461858	ECO:0000314 direct assay evidence used in manual assertion	Figure 4 indicates the purified Gid protein catalyzes the site-specific formation of m5U-54 in [32P]-labeled yeast tRNAAsp transcript.	challenge
requireschanges	BACSU:FENR2	2012-04-14 22:10:18 CDT	GO:0055114 oxidation-reduction process (P)	PMID:20878669	ECO:0000314 direct assay evidence used in manual assertion	NADPH-binding domain must rotate 60° relative to the FAD-binding domain in order for hydride (movement of electrons and protons) transfer to take place as seen as figure 2d.	challenge
requireschanges	BACSU:SIRA	2012-04-14 23:14:37 CDT	GO:0008156 negative regulation of DNA replication (P)	PMID:21239581	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 5 indicates that SirA reduces the amount of wild-type but not mutant DnaA bound at the origin of replication. Therefore this results indicate that interaction of SirA contacts DnaA at a patch of 3 residues located on the surface of domain I of the replication initiator protein and inhibits the ability of DNA to bind to the origin of replication.	challenge
acceptable	BACSU:KINA	2012-04-14 23:35:02 CDT	GO:0030435 sporulation resulting in formation of a cellular spore (P)	PMID:16166384	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4 shows KinA synthesis triggers sporulation early in the exponential phase of growth.	challenge
	BACSU:KINA	2019-07-23 16:15:23 CDT	GO:0016301 kinase activity (F)	PMID:16166384	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 1 shows that inducing the synthesis of KinA during growth triggers efficient sporulation.	challenge

acceptable:1
unacceptable:0
requires_changes:6
flagged:0

Annotations challenged by El001607

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history

0 annotations fixed by El001607

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links

acceptable:0
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by El001607

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history

0 annotations fixed by El001607