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User:Kimahrom

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SUPER BOWL (Round 5)

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptableHERSS:D8ITX32012-04-10 11:18:32 CDTGO:0006808 regulation of nitrogen utilization (P)PMID:21223584ECO:0000315 mutant phenotype evidence used in manual assertion

figure 2

challenge
requireschangesHUMAN:ARGI12012-04-12 20:15:58 CDTGO:0004053 arginase activity (F)PMID:3540966ECO:0000247 sequence alignment evidence used in manual assertion

figure 4

challenge
acceptableHUMAN:ARGI22012-04-13 09:53:10 CDTGO:0004053 arginase activity (F)PMID:16128822ECO:0000315 mutant phenotype evidence used in manual assertion

figure 2

challenge
acceptableHUMAN:NOS12012-04-13 09:59:38 CDTGO:0004517 nitric-oxide synthase activity (F)PMID:1689048ECO:0000314 direct assay evidence used in manual assertion

figure 3

challenge
requireschangesHUMAN:GLSK2012-04-13 10:03:58 CDTGO:0004359 glutaminase activity (F)PMID:10719215ECO:0000247 sequence alignment evidence used in manual assertion

figure 3

challenge
requireschangesBREST:CHOD2012-04-15 14:50:00 CDTGO:0055114 oxidation-reduction process (P)PMID:17560744ECO:0000315 mutant phenotype evidence used in manual assertion

figure 1

choE is synonym of choB

challenge

acceptable:3
unacceptable:0
requires_changes:3
flagged:0

Annotations challenged by Kimahrom

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
unacceptableClaxtonk,
Team Anne O. Taters
HUMAN:PGO:0006749 - glutathione metabolic process (P)PMID:22065085ECO:0000316 genetic interaction evidence used in manual assertionchallengeC: 1

0 annotations fixed by Kimahrom


MSU Internal

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptableVIBCH:TOXR2012-03-27 12:49:41 CDTGO:0000156 two-component response regulator activity (F)PMID:21542860ECO:0000314 direct assay evidence used in manual assertion

figure 1, This suggests the ToxR-V71A mutation affects a region of ToxR that is especially important for ToxR to directly activate the ompU promoter, but less critical when ToxR plays an accessory role with TcpP to activate the toxT promoter

figure 3. Gel-shift assays to assess promoter recognition by various ToxR mutant proteins identified in a random mutagenesis ompU-sacB selection strategy.

challenge

acceptable:1
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by Kimahrom

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
unacceptableClaxtonk,
Team Anne O. Taters
HUMAN:PGO:0006749 - glutathione metabolic process (P)PMID:22065085ECO:0000316 genetic interaction evidence used in manual assertionchallengeC: 1

0 annotations fixed by Kimahrom