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User:Kelly.huth

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Spring 2013

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
correctedthroughchallengesDEIRA:Q9RUY52013-03-28 12:15:33 CDTGO:0019954 asexual reproduction (P)PMID:23441204ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3A shows that "cells devoid of DR1245 protein showed an important growth defect... The generation time of the Δdr1245 mutant... was approximately three fold that of the wild type strain." This indicates that DR1245 is necessary for cell growth.

challenge
acceptableHUMAN:MMP262013-04-11 11:42:38 CDTGO:0050728 negative regulation of inflammatory response (P)PMID:23569462ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2 shows that "over-expression of MMP-26...decreased the expression of inflammatory genes, while its down-regulation exhibited an opposite effect," indicating a "novel anti-inflammatory role for MMP-26."

challenge

acceptable:1
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by Kelly.huth

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history

0 annotations fixed by Kelly.huth

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Fall 2012

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptablePSEAE:RHLR2012-09-22 18:20:09 CDTGO:0010467 gene expression (P)PMID:9294432ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 4A shows that RhlR was needed for the expression of rhlA9-lacZ in E. coli DH5a(pECP61.5)

challenge
acceptablePSEAE:LASR2012-09-18 18:44:02 CDTGO:0010468 regulation of gene expression (P)PMID:9294432ECO:0000314 direct assay evidence used in manual assertion

Table 3 shows that lasB9-lacZ expression in PAI-1 (50 nM) in the presence of LasR was greatly amplified.

challenge
unacceptableHUMAN:BMP42012-09-22 19:57:49 CDTGO:0007165 signal transduction (P)PMID:22988237ECO:0000314 direct assay evidence used in manual assertion

Figure 4D shows the positive regulatory loop of the BMP4 signaling pathway

challenge
acceptableDANRE:E9QIK22012-11-11 20:45:40 CSTGO:0051726 regulation of cell cycle (P)PMID:23111152ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3(A)(c) shows that in the absence of Mdka, "central retinal progenitors fail to exit the cell cycle at the appropriate developmental stage," implying that "Mdka functions to control cell cycle kinetics."

challenge
acceptableHORSE:LATH2012-11-15 08:52:29 CSTGO:0001659 temperature homeostasis (P)PMID:3753435ECO:0000314 direct assay evidence used in manual assertion

Table 4 shows that Latherin adsorbs readily to hydrophobic surfaces, rendering them wettable by water at concentrations one or more orders of magnitude lower than of other proteins. This property of the protein may be of functional importance in temperature regulation, as it allows sweat to spread over the animal rather than beading.

challenge
unacceptableRAT:HMOX12012-11-15 19:23:51 CSTGO:1901299 negative regulation of hydrogen peroxide-mediated programmed cell death (P)PMID:22989377ECO:0000314 direct assay evidence used in manual assertion

Figure 1 shows that cells overexpressing HO-1 are protected against peroxide killing

challenge

acceptable:4
unacceptable:2
requires_changes:0
flagged:0

Annotations challenged by Kelly.huth

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history

0 annotations fixed by Kelly.huth