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User:Goheenmi

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CACAO Spring 2014

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptableECOK1:LUXS2014-04-06 15:06:14 CDTGO:0009372 quorum sensing (P)PMID:23046700ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3 shows that the mutant strain without the LuxS gene produces much less AI-2. AI-2 is a universal signaling molecule produced by many different types of bacterial to mediate quorum sensing.

challenge
acceptableECOK1:LUXS2014-04-06 15:17:27 CDTGO:2000145 regulation of cell motility (P)PMID:23046700ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 4 shows that the mutant strain without the LuxS gene exhibits much less motility than the wild-type strain.

challenge
updatedbyinstructorECOLX:A0A1Z3UVK62014-04-06 15:43:39 CDTGO:1902201 negative regulation of bacterial-type flagellum-dependent cell motility (P)PMID:22843849ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2 shows that mutant strains without the Z0020 gene have increased swimming motility and Figure 3 shows this is due to increased flagellum production.

challenge
acceptableECO57:Q7DBI02014-04-06 16:00:49 CDTGO:0007155 cell adhesion (P)PMID:19016776ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1 shows that the mutant strain without the fliC gene had significantly less adhesion ability than the wild-type strain.

challenge
acceptableECO57:HHA2014-04-06 16:09:13 CDTGO:2000147 positive regulation of cell motility (P)PMID:24465756ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1 shows that mutant strains without the hha gene exhibited significantly less motility than the wild-type parental strains.

challenge

acceptable:4
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by Goheenmi

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
requireschangesBonifera,
MichSt14A 27
HUMAN:VNN1GO:0017159 - pantetheine hydrolase activity (F)PMID:24140347ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 3
updatedbyinstructorAsigurdsson,
Team On a Boat
DROME:KPC2GO:0016062 - obsolete adaptation of rhodopsin mediated signaling (P)PMID:9651370ECO:0000316 genetic interaction evidence used in manual assertionchallengeC: 1

0 annotations fixed by Goheenmi

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