GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ECOK1:LUXS

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Escherichia coli O1:K1 / APEC. (405955)
Gene Name(s) luxS (ECO:0000255 with HAMAP-Rule:MF_00091)
Protein Name(s) S-ribosylhomocysteine lyase (ECO:0000255 with HAMAP-Rule:MF_00091)

AI-2 synthesis protein (ECO:0000255 with HAMAP-Rule:MF_00091) Autoinducer-2 production protein LuxS (ECO:0000255 with HAMAP-Rule:MF_00091)

External Links
UniProt A1AEN2
EMBL CP000468
RefSeq YP_853882.1
ProteinModelPortal A1AEN2
SMR A1AEN2
STRING 405955.APECO1_3834
BindingDB A1AEN2
PRIDE A1AEN2
EnsemblBacteria ABJ02122
GeneID 4493105
KEGG ecv:APECO1_3834
PATRIC 18217495
eggNOG COG1854
HOGENOM HOG000040371
KO K07173
OMA KQPNQDH
OrthoDB EOG68WRBM
Proteomes UP000008216
GO GO:0005506
GO:0043768
GO:0009372
Gene3D 3.30.1360.80
HAMAP MF_00091
InterPro IPR011249
IPR003815
Pfam PF02664
PIRSF PIRSF006160
PRINTS PR01487
ProDom PD013172
SUPFAM SSF63411

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009372

quorum sensing

PMID:23046700[1]

ECO:0000315

P

Figure 3 shows that the mutant strain without the LuxS gene produces much less AI-2. AI-2 is a universal signaling molecule produced by many different types of bacterial to mediate quorum sensing.

complete
CACAO 10055

GO:2000145

regulation of cell motility

PMID:23046700[1]

ECO:0000315

P

Figure 4 shows that the mutant strain without the LuxS gene exhibits much less motility than the wild-type strain.

complete
CACAO 10063

involved_in

GO:2000145

regulation of cell motility

PMID:23046700[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0009372

quorum sensing

PMID:23046700[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011249

F

Seeded From UniProt

complete

enables

GO:0005506

iron ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003815
InterPro:IPR037005

F

Seeded From UniProt

complete

involved_in

GO:0009372

quorum sensing

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003815
InterPro:IPR037005

P

Seeded From UniProt

complete

enables

GO:0043768

S-ribosylhomocysteine lyase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003815
InterPro:IPR037005

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011249

F

Seeded From UniProt

complete

enables

GO:0043768

S-ribosylhomocysteine lyase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:4.4.1.21

F

Seeded From UniProt

complete

enables

GO:0043768

S-ribosylhomocysteine lyase activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000076351

F

Seeded From UniProt

complete

involved_in

GO:0009372

quorum sensing

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000076351

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

involved_in

GO:0009372

quorum sensing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0673

P

Seeded From UniProt

complete

enables

GO:0016829

lyase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0456

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Han, X et al. (2013) The luxS gene functions in the pathogenesis of avian pathogenic Escherichia coli. Microb. Pathog. 55 21-7 PubMed GONUTS page