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User:Egbertr1

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CACAO Spring 2014

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
updatedbyinstructorHUMAN:MCPH12014-04-06 13:45:41 CDTGO:0071850 mitotic cell cycle arrest (P)PMID:24633962ECO:0000314 direct assay evidence used in manual assertion

Figure 5: Shows that cells with overexpression of MCPH1 protein induces S phase cell cycle arrest

challenge
unacceptableHUMAN:JMJD62014-04-06 15:50:17 CDTGO:0070815 peptidyl-lysine 5-dioxygenase activity (F)PMID:24667498ECO:0000314 direct assay evidence used in manual assertion

Figure 2 shows the hydroxylase activity on the tumor suppressor p53 at lysine 382

challenge
unacceptableHUMAN:JAK12014-04-06 16:56:15 CDTGO:0060337 type I interferon signaling pathway (P)PMID:24665409ECO:0000314 direct assay evidence used in manual assertion

Figure 5 shows that JAK is a critical component IFNγ/TNFα-induced signaling cascade

challenge
requireschangesHUMAN:AKT12014-04-06 17:50:30 CDTGO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (P)PMID:24601882ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1C shows a constitutively active Akt1 decreases caspase3 compared to the WT control

challenge

acceptable:0
unacceptable:2
requires_changes:1
flagged:0

Annotations challenged by Egbertr1

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
unacceptableDjgulizia,
Team Texas Aggies
HUMAN:GOLP3GO:0005794 - Golgi apparatus (C)PMID:18410729ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 2
unacceptableTernesch,
MichSt14A 22
MOUSE:ALDH2GO:0008106 - alcohol dehydrogenase (NADP+) activity (F)PMID:24651616ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

0 annotations fixed by Egbertr1

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