GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

HUMAN:ATF4

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) ATF4 (synonyms: CREB2, TXREB)
Protein Name(s) Cyclic AMP-dependent transcription factor ATF-4

cAMP-dependent transcription factor ATF-4 Activating transcription factor 4 Cyclic AMP-responsive element-binding protein 2 CREB-2 cAMP-responsive element-binding protein 2 DNA-binding protein TAXREB67 Tax-responsive enhancer element-binding protein 67 TaxREB67

External Links
UniProt P18848
EMBL D90209
M86842
AL022312
BC008090
BC011994
BC024775
BC073990
CCDS CCDS13996.1
PIR A45377
RefSeq NP_001666.2
NP_877962.1
UniGene Hs.496487
PDB 1CI6
PDBsum 1CI6
ProteinModelPortal P18848
SMR P18848
BioGrid 106958
DIP DIP-207N
DIP-354N
IntAct P18848
MINT MINT-146610
STRING 9606.ENSP00000336790
DrugBank DB00852
PhosphoSite P18848
DMDM 116241262
MaxQB P18848
PaxDb P18848
PRIDE P18848
DNASU 468
Ensembl ENST00000337304
ENST00000396680
ENST00000404241
GeneID 468
KEGG hsa:468
UCSC uc003axz.3
CTD 468
GeneCards GC22P039916
HGNC HGNC:786
HPA CAB011596
HPA036934
MIM 604064
neXtProt NX_P18848
PharmGKB PA25086
eggNOG NOG325856
HOGENOM HOG000004844
HOVERGEN HBG004301
InParanoid P18848
KO K04374
OMA GECRELE
OrthoDB EOG72JWGW
PhylomeDB P18848
TreeFam TF316136
Reactome REACT_18277
REACT_18355
REACT_18423
ChiTaRS ATF4
EvolutionaryTrace P18848
GeneWiki ATF4
GenomeRNAi 468
NextBio 1935
PRO PR:P18848
Proteomes UP000005640
Bgee P18848
CleanEx HS_ATF4
ExpressionAtlas P18848
Genevestigator P18848
GO GO:0005737
GO:0032590
GO:1990037
GO:0005815
GO:0043005
GO:0034399
GO:0005654
GO:0005634
GO:0005667
GO:0001046
GO:0003677
GO:0000978
GO:0001077
GO:0000981
GO:0003700
GO:0044212
GO:0006987
GO:0006520
GO:0044267
GO:0032922
GO:0030968
GO:0007214
GO:0006094
GO:0070059
GO:1903204
GO:0043267
GO:0043065
GO:0043525
GO:0045944
GO:1990440
GO:0036091
GO:0045893
GO:0006355
GO:0034976
GO:0006366
InterPro IPR029811
IPR004827
PANTHER PTHR13044:SF2
Pfam PF00170
SMART SM00338
PROSITE PS50217
PS00036

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0010467

gene expression

PMID:22363646[1]

ECO:0000314

P

Figure 1A: Protein and mRNA levels of ATF4 were determined using Western Blot and qPCR. β-actin and GAPDH were used as a control.

complete
CACAO 3932

GO:0001558

regulation of cell growth

PMID:22363646[1]

ECO:0000315

P

Figure 1B, C, D, E, H: When transfected into SGC7901 and AGS cells, colony number increased due to overexpression of ATF4. When ATF4 was knocked out of expression in SGC7901/ADR and SGC7901/VCR cells the colony number decreased. This shows that ATF4 produced multi-drug resistance in cancer cells, allowing for cell growth.

complete
CACAO 3933

GO:0045766

positive regulation of angiogenesis

PMID:28553953[2]

ECO:0000314

P

Figure 10 shows that ATF4 expression promotes tumor angiogenesis.

complete
CACAO 12957

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:19274049[3]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:19274049[3]

ECO:0000255

match to sequence model evidence used in manual assertion

InterPro:IPR004827

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

GO_REF:0000113

ECO:0005556

multiple sequence alignment evidence used in manual assertion

UniProtKB:O70191

F

Seeded From UniProt

complete

involved_in

GO:0120163

negative regulation of cold-induced thermogenesis

PMID:22980225[4]

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

colocalizes_with

GO:0005813

centrosome

PMID:20873783[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:20873783[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0019901

protein kinase binding

PMID:20873783[5]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9HC98

F

Seeded From UniProt

complete

involved_in

GO:1903351

cellular response to dopamine

PMID:24136195[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:24136195[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(UniProtKB:P0DMM9)

Seeded From UniProt

complete

involved_in

GO:0036003

positive regulation of transcription from RNA polymerase II promoter in response to stress

PMID:25681212[7]

ECO:0000305

curator inference used in manual assertion

GO:1990440

P

Seeded From UniProt

complete

involved_in

GO:0034198

cellular response to amino acid starvation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q6ZWX6

P

Seeded From UniProt

complete

involved_in

GO:0042789

mRNA transcription by RNA polymerase II

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0034198

cellular response to amino acid starvation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0034644

cellular response to UV

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q6ZWX6

P

Seeded From UniProt

complete

involved_in

GO:0032057

negative regulation of translational initiation in response to stress

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q6ZWX6

P

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:24939851[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • regulates_expression_of:(ENSEMBL:ENSG00000162772)
  • part_of:(GO:0034976)|regulates_expression_of(ENSEMBL:ENSG00000175197)
  • part_of:(GO:0034976)|regulates_expression_of(ENSEMBL:ENSG00000120889)
  • part_of:(GO:0034976)

Seeded From UniProt

complete

involved_in

GO:0034976

response to endoplasmic reticulum stress

PMID:24939851[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:18940792[9]

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(UniProtKB:P08243)

Seeded From UniProt

complete

part_of

GO:1990617

CHOP-ATF4 complex

PMID:18940792[9]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P35638

C

Seeded From UniProt

complete

part_of

GO:1990617

CHOP-ATF4 complex

PMID:15775988[10]

ECO:0000303

author statement without traceable support used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

PMID:15775988[10]

ECO:0000303

author statement without traceable support used in manual assertion

F

has_direct_input:(UniProtKB:P35638)

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:15775988[10]

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(UniProtKB:Q96RU7)

Seeded From UniProt

complete

part_of

GO:1990589

ATF4-CREB1 transcription factor complex

PMID:12871976[11]

ECO:0000314

direct assay evidence used in manual assertion

C

exists_during:(GO:0034976)

Seeded From UniProt

complete

enables

GO:0043522

leucine zipper domain binding

PMID:11478948[12]

ECO:0000314

direct assay evidence used in manual assertion

F

has_direct_input:(UniProtKB:P35638)

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:11478948[12]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0001085

RNA polymerase II transcription factor binding

PMID:11478948[12]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P35638

F

part_of:(GO:0000122)

Seeded From UniProt

complete

part_of

GO:1990617

CHOP-ATF4 complex

PMID:11478948[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:11478948[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:11478948[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0010575

positive regulation of vascular endothelial growth factor production

PMID:22915762[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

happens_during:(GO:0042149)

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:22915762[13]

ECO:0000314

direct assay evidence used in manual assertion

F

happens_during:(GO:0042149)

Seeded From UniProt

complete

involved_in

GO:0042149

cellular response to glucose starvation

PMID:22915762[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045943

positive regulation of transcription by RNA polymerase I

PMID:22915762[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:1990590

ATF1-ATF4 transcription factor complex

PMID:12871976[11]

ECO:0000314

direct assay evidence used in manual assertion

C

exists_during:(GO:0034976)

Seeded From UniProt

complete

contributes_to

GO:0044212

transcription regulatory region DNA binding

PMID:12871976[11]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:12871976[11]

ECO:0000314

direct assay evidence used in manual assertion

F

has_regulation_target:(ENSEMBL:ENSG00000044574)

Seeded From UniProt

complete

involved_in

GO:1990440

positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress

PMID:12871976[11]

ECO:0000314

direct assay evidence used in manual assertion

P

regulates_transcription_of:(ENSEMBL:ENSG00000044574)

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:21113145[14]

ECO:0000314

direct assay evidence used in manual assertion

F

has_input:(UniProtKB:O60260)

Seeded From UniProt

complete

involved_in

GO:0036091

positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress

PMID:21113145[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(UniProtKB:O60260)

Seeded From UniProt

complete

involved_in

GO:1990440

positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress

PMID:21113145[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(UniProtKB:O60260)

Seeded From UniProt

complete

involved_in

GO:0036091

positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress

PMID:23392669[15]

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9ES19

P

has_regulation_target:(UniProtKB:O60260)

Seeded From UniProt

complete

involved_in

GO:1903204

negative regulation of oxidative stress-induced neuron death

PMID:23392669[15]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:Q9ES19

P

Seeded From UniProt

complete

part_of

GO:1990037

Lewy body core

PMID:23392669[15]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(UBERON:0002038)
  • part_of:(CL:0000540)

Seeded From UniProt

complete

part_of

GO:0034399

nuclear periphery

PMID:23392669[15]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(UBERON:0002038)
  • part_of:(CL:0000540)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:23392669[15]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(UBERON:0002038)
  • part_of:(CL:0000540)

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:23392669[15]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(UBERON:0002038)
  • part_of:(CL:0000540)

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:23392669[15]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(UBERON:0002038)
  • part_of:(CL:0000540)

Seeded From UniProt

complete

enables

GO:0000980

RNA polymerase II distal enhancer sequence-specific DNA binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

F

Seeded From UniProt

complete

involved_in

GO:0032922

circadian regulation of gene expression

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0034976

response to endoplasmic reticulum stress

PMID:19061639[16]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16682973[17]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0070059

intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:15788408[18]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:11960987[19]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:18940792[9]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:15775988[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:9190894[20]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0043525

positive regulation of neuron apoptotic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

involved_in

GO:0006094

gluconeogenesis

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:18940792[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:15788408[18]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q06507

F

Seeded From UniProt

complete

involved_in

GO:1990440

positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress

PMID:21873635[21]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88096
PANTHER:PTN000315889
UniProtKB:P18848

P

Seeded From UniProt

complete

involved_in

GO:0036091

positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress

PMID:21873635[21]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000315889
RGD:621863
UniProtKB:P18848

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:21873635[21]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2141857
MGI:MGI:88096
PANTHER:PTN000315883
WB:WBGene00013878

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[21]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2141857
MGI:MGI:88096
PANTHER:PTN000315883
RGD:621863
RGD:628902
UniProtKB:P18848
UniProtKB:Q9Y2D1
WB:WBGene00000221
WB:WBGene00013878

C

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[21]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88096
PANTHER:PTN000315883
UniProtKB:P18848
WB:WBGene00013878

F

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

PMID:21873635[21]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000315883
UniProtKB:Q9Y2D1

F

Seeded From UniProt

complete

involved_in

GO:2000120

positive regulation of sodium-dependent phosphate transport

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

part_of

GO:1990590

ATF1-ATF4 transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

C

Seeded From UniProt

complete

part_of

GO:1990589

ATF4-CREB1 transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

C

Seeded From UniProt

complete

involved_in

GO:1990440

positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:1905461

positive regulation of vascular associated smooth muscle cell apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0120163

negative regulation of cold-induced thermogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

part_of

GO:0090575

RNA polymerase II transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

C

Seeded From UniProt

complete

involved_in

GO:0070169

positive regulation of biomineral tissue development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0070059

intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0043525

positive regulation of neuron apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0042789

mRNA transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0036499

PERK-mediated unfolded protein response

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0034976

response to endoplasmic reticulum stress

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0034198

cellular response to amino acid starvation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0032922

circadian regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0007623

circadian rhythm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0006874

cellular calcium ion homeostasis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

involved_in

GO:0006094

gluconeogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

F

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

F

Seeded From UniProt

complete

enables

GO:0000980

RNA polymerase II distal enhancer sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q06507
ensembl:ENSMUSP00000105234

F

Seeded From UniProt

complete

involved_in

GO:1990737

response to manganese-induced endoplasmic reticulum stress

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

P

Seeded From UniProt

complete

involved_in

GO:1903204

negative regulation of oxidative stress-induced neuron death

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

P

Seeded From UniProt

complete

involved_in

GO:0090650

cellular response to oxygen-glucose deprivation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

P

Seeded From UniProt

complete

involved_in

GO:0043267

negative regulation of potassium ion transport

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

P

Seeded From UniProt

complete

involved_in

GO:0036091

positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

P

Seeded From UniProt

complete

part_of

GO:0032590

dendrite membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

C

Seeded From UniProt

complete

involved_in

GO:0030182

neuron differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

P

Seeded From UniProt

complete

involved_in

GO:0009636

response to toxic substance

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

F

Seeded From UniProt

complete

enables

GO:0008022

protein C-terminus binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

F

Seeded From UniProt

complete

involved_in

GO:0007214

gamma-aminobutyric acid signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ES19
ensembl:ENSRNOP00000060302

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004827
InterPro:IPR029811

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR029811

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR029811

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004827

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR029811

P

Seeded From UniProt

complete

involved_in

GO:0036499

PERK-mediated unfolded protein response

PMID:22934019[22]
PMID:22013210[23]
Reactome:R-HSA-381042

ECO:0000304

author statement supported by traceable reference used in manual assertion



P

Seeded From UniProt

complete

involved_in

GO:0061395

positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance

PMID:14685163[24]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

has_regulation_target:(UniProtKB:P35638)

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:23392669[15]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

has_input:(UniProtKB:O60260)

Seeded From UniProt

complete

involved_in

GO:0043065

positive regulation of apoptotic process

PMID:23392669[15]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006520

cellular amino acid metabolic process

PMID:12689582[25]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:12689582[25]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-HSA-381128

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005856

cytoskeleton

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0206

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0048511

rhythmic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0090

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

part_of

GO:0005815

microtubule organizing center

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0048

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Zhu, H et al. (2012) Activating transcription factor 4 confers a multidrug resistance phenotype to gastric cancer cells through transactivation of SIRT1 expression. PLoS ONE 7 e31431 PubMed GONUTS page
  2. Chen, D et al. (2017) ATF4 promotes angiogenesis and neuronal cell death and confers ferroptosis in a xCT-dependent manner. Oncogene 36 5593-5608 PubMed GONUTS page
  3. 3.0 3.1 Vaquerizas, JM et al. (2009) A census of human transcription factors: function, expression and evolution. Nat. Rev. Genet. 10 252-63 PubMed GONUTS page
  4. Wang, C et al. (2013) Effects of ATF4 on PGC1α expression in brown adipose tissue and metabolic responses to cold stress. Metab. Clin. Exp. 62 282-9 PubMed GONUTS page
  5. 5.0 5.1 5.2 Vaz Meirelles, G et al. (2010) Characterization of hNek6 interactome reveals an important role for its short N-terminal domain and colocalization with proteins at the centrosome. J. Proteome Res. 9 6298-316 PubMed GONUTS page
  6. 6.0 6.1 Sidharthan, NP et al. (2013) Cytosolic sulfotransferase 1A3 is induced by dopamine and protects neuronal cells from dopamine toxicity: role of D1 receptor-N-methyl-D-aspartate receptor coupling. J. Biol. Chem. 288 34364-74 PubMed GONUTS page
  7. Dominguez-Bautista, JA et al. () Loss of lysosome-associated membrane protein 3 (LAMP3) enhances cellular vulnerability against proteasomal inhibition. Eur. J. Cell Biol. 94 148-61 PubMed GONUTS page
  8. 8.0 8.1 Edagawa, M et al. (2014) Role of activating transcription factor 3 (ATF3) in endoplasmic reticulum (ER) stress-induced sensitization of p53-deficient human colon cancer cells to tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL)-mediated apoptosis through up-regulation of death receptor 5 (DR5) by zerumbone and celecoxib. J. Biol. Chem. 289 21544-61 PubMed GONUTS page
  9. 9.0 9.1 9.2 9.3 Su, N & Kilberg, MS (2008) C/EBP homology protein (CHOP) interacts with activating transcription factor 4 (ATF4) and negatively regulates the stress-dependent induction of the asparagine synthetase gene. J. Biol. Chem. 283 35106-17 PubMed GONUTS page
  10. 10.0 10.1 10.2 10.3 Ohoka, N et al. (2005) TRB3, a novel ER stress-inducible gene, is induced via ATF4-CHOP pathway and is involved in cell death. EMBO J. 24 1243-55 PubMed GONUTS page
  11. 11.0 11.1 11.2 11.3 11.4 Luo, S et al. (2003) Induction of Grp78/BiP by translational block: activation of the Grp78 promoter by ATF4 through and upstream ATF/CRE site independent of the endoplasmic reticulum stress elements. J. Biol. Chem. 278 37375-85 PubMed GONUTS page
  12. 12.0 12.1 12.2 12.3 12.4 12.5 Gachon, F et al. (2001) The cAMP response element binding protein-2 (CREB-2) can interact with the C/EBP-homologous protein (CHOP). FEBS Lett. 502 57-62 PubMed GONUTS page
  13. 13.0 13.1 13.2 13.3 Wang, Y et al. (2012) The unfolded protein response induces the angiogenic switch in human tumor cells through the PERK/ATF4 pathway. Cancer Res. 72 5396-406 PubMed GONUTS page
  14. 14.0 14.1 14.2 Bouman, L et al. (2011) Parkin is transcriptionally regulated by ATF4: evidence for an interconnection between mitochondrial stress and ER stress. Cell Death Differ. 18 769-82 PubMed GONUTS page
  15. 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 Sun, X et al. (2013) ATF4 protects against neuronal death in cellular Parkinson's disease models by maintaining levels of parkin. J. Neurosci. 33 2398-407 PubMed GONUTS page
  16. Chami, M et al. (2008) Role of SERCA1 truncated isoform in the proapoptotic calcium transfer from ER to mitochondria during ER stress. Mol. Cell 32 641-51 PubMed GONUTS page
  17. Sayer, JA et al. (2006) The centrosomal protein nephrocystin-6 is mutated in Joubert syndrome and activates transcription factor ATF4. Nat. Genet. 38 674-81 PubMed GONUTS page
  18. 18.0 18.1 Roybal, CN et al. (2005) The oxidative stressor arsenite activates vascular endothelial growth factor mRNA transcription by an ATF4-dependent mechanism. J. Biol. Chem. 280 20331-9 PubMed GONUTS page
  19. Siu, F et al. (2002) ATF4 is a mediator of the nutrient-sensing response pathway that activates the human asparagine synthetase gene. J. Biol. Chem. 277 24120-7 PubMed GONUTS page
  20. Reddy, TR et al. (1997) Functional interaction of the HTLV-1 transactivator Tax with activating transcription factor-4 (ATF4). Oncogene 14 2785-92 PubMed GONUTS page
  21. 21.0 21.1 21.2 21.3 21.4 21.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  22. Brown, MK & Naidoo, N (2012) The endoplasmic reticulum stress response in aging and age-related diseases. Front Physiol 3 263 PubMed GONUTS page
  23. Hetz, C et al. (2011) The unfolded protein response: integrating stress signals through the stress sensor IRE1α. Physiol. Rev. 91 1219-43 PubMed GONUTS page
  24. Oyadomari, S & Mori, M (2004) Roles of CHOP/GADD153 in endoplasmic reticulum stress. Cell Death Differ. 11 381-9 PubMed GONUTS page
  25. 25.0 25.1 Rutkowski, DT & Kaufman, RJ (2003) All roads lead to ATF4. Dev. Cell 4 442-4 PubMed GONUTS page