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Category:Team Peacock

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StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
unacceptableHUMAN:P53Raoneha, Team Peacock2013-04-14 15:33:11 CDTGO:0030330 DNA damage response, signal transduction by p53 class mediator (P)PMID:22955915ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1 shows that a mutation in the p53 results in mutations in the DNA-binding domain, in DLBCL (Diffuse large B-cell lymphoma) patients

Figure 2 shows that a mutation of the p53 results in poor survival rates for those with DLBCL

challenge
updatedbyinstructorHUMAN:DCR1ANeillmeg, Team Peacock2013-04-10 12:28:00 CDTGO:0035312 5'-3' exodeoxyribonuclease activity (F)PMID:22692201ECO:0000314 direct assay evidence used in manual assertion

Figure 3

challenge
acceptableMOUSE:UBP44Neillmeg, Team Peacock2013-04-08 16:06:31 CDTGO:0007059 chromosome segregation (P)PMID:23187126ECO:0000315 mutant phenotype evidence used in manual assertion

see figures 1 and 2 to see how the protein is the one to help with chromosome segregation

challenge
correctedthroughchallengesAZOL4:G7ZFL4Neillmeg, Team Peacock2013-04-08 16:04:37 CDTGO:0002534 cytokine production involved in inflammatory response (P)PMID:23202729ECO:0000314 direct assay evidence used in manual assertion

see figure 2 for the results of the direct assay and the proof that the protein produces cytokine that is involved in inflammatory responce

challenge
acceptableHUMAN:HDAC6Neillmeg, Team Peacock2013-04-08 15:55:39 CDTGO:0004407 histone deacetylase activity (F)PMID:23322205ECO:0000315 mutant phenotype evidence used in manual assertion

see figure 2 to experimental results that show the proteins ablity to deacetylase activity

challenge
correctedthroughchallengesHUMAN:Q05CP8Neillmeg, Team Peacock2013-04-08 15:52:55 CDTGO:0007090 regulation of S phase of mitotic cell cycle (P)PMID:22363533ECO:0000315 mutant phenotype evidence used in manual assertion

see Figure 2 in paper to see the experiment done to show that the protein is used to regulate the S phase of mitotic cell cycle

challenge
acceptableHUMAN:DCR1BNeillmeg, Team Peacock2013-04-08 15:42:45 CDTGO:0008409 5'-3' exonuclease activity (F)PMID:22692201ECO:0000314 direct assay evidence used in manual assertion

Figure 1 shows the experiment to show the exonuclease activity

challenge
acceptableDROME:CHD1Raoneha, Team Peacock2013-03-28 14:03:56 CDTGO:0140658 ATP-dependent chromatin remodeler activity (F)PMID:23533627ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 1A indicates that a loss of CHD1 results in defective polytene chromosomes. Figure 3 shows that a lack in CHD1 can led to increased levels of HP1a and the H3K9me2 repressive chromatin. Fig 4 shows that an increase in CHD1 leads to disruption in chromosome structure, whereas a decrease of the ATP inactivated form of CHD1 didn't have much affect.

GO term changed per Ticket-3833 ~~~~

challenge
acceptableHUMAN:SMUF1Neillmeg, Team Peacock2013-03-28 12:12:04 CDTGO:2000060 positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process (P)PMID:21454619ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 4 shows how the mutation of this gene affects the regulation of the WFS1 protien

challenge
acceptableCATRO:E3UTU0Neillmeg, Team Peacock2013-03-26 11:54:51 CDTGO:0008170 N-methyltransferase activity (F)PMID:20956330ECO:0000314 direct assay evidence used in manual assertion

Figure 3 and the paragraph explaining the results of the essay explain how the protein has N-methyltransferase activity.

challenge

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Pages in category "Team Peacock"

The following 2 pages are in this category, out of 2 total.


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