User:Readettd

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
acceptable	YEAST:GAP1	2014-04-06 11:50:50 CDT	GO:0015192 L-phenylalanine transmembrane transporter activity (F)	PMID:24701347	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 1 shows phenylalanine transport in wild type cells grown on medium with proline as the sole nitrogen source is catalyzed by Gap1. Gap1 activity is absent when ammonium ion is used as a nitrogen source.	challenge
acceptable	YEAST:BAP2	2014-04-06 12:02:26 CDT	GO:0015192 L-phenylalanine transmembrane transporter activity (F)	PMID:24701347	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 1 shows BAP2 to be the major permease responsible for high affinity phenylalanine transport	challenge
acceptable	YEAST:AGP1	2014-04-06 12:12:42 CDT	GO:0015192 L-phenylalanine transmembrane transporter activity (F)	PMID:24701347	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 1 shows AGP1 has low affinity phenylalanine permease activity	challenge
acceptable	9ROSI:C0LU17	2014-04-06 13:36:34 CDT	GO:0004503 monophenol monooxygenase activity (F)	PMID:24613318	ECO:0000314 direct assay evidence used in manual assertion	Table 3 shows a monophenolase activity of kcat 20.8 s^-1 towards L-tyrosine	challenge
updatedbyinstructor	9ROSI:C0LU17	2014-04-06 13:39:44 CDT	GO:0036263 L-DOPA monooxygenase activity (F)	PMID:24613318	ECO:0000314 direct assay evidence used in manual assertion	Table 3 shows a diphenolase activity of kcat 199.3 s^-1 towards L-dopa	challenge
unacceptable	FRATT:Q5NGM8	2014-04-06 15:15:40 CDT	GO:0016021 integral component of membrane (C)	PMID:24593131	ECO:0000314 direct assay evidence used in manual assertion	Figure 2 shows the CapA-frGFP fusion protein, which was used to identify CapA as an integral inner-membrane protein with both the N- and C- termini oriented towards the cytoplasm.	challenge
unacceptable	RHOS4:Q3J2P5	2014-04-06 15:50:59 CDT	GO:0015250 water channel activity (F)	PMID:24497982	ECO:0000314 direct assay evidence used in manual assertion	Figure 7 shows the average water permeability of the aquaporin to be 1.23±0.43×10−12 cm3/s	challenge

acceptable:4
unacceptable:2
requires_changes:0
flagged:0

Annotations challenged by Readettd

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
updatedbyinstructor	Drl5141, Team Protein Titans	MOUSE:STAT1	GO:0060337 - type I interferon-mediated signaling pathway (P)	PMID:24598055	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 1
updatedbyinstructor	Drl5141, Team Protein Titans	MOUSE:STAT2	GO:0060337 - type I interferon-mediated signaling pathway (P)	PMID:24598055	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 1
requireschanges	Mnxj39, Team blindmice	HUMAN:NEU1	GO:0090303 - positive regulation of wound healing (P)	PMID:24205344	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 3
requireschanges	Megans, Team Rubby ducky	VIBCB:LUXO	GO:0000156 - phosphorelay response regulator activity (F)	PMID:10027982	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 1

0 annotations fixed by Readettd

What do the icons mean in the status column?