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MOUSE:SMAD4

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Smad4 (synonyms: Dpc4, Madh4)
Protein Name(s) Mothers against decapentaplegic homolog 4

MAD homolog 4 Mothers against DPP homolog 4 Deletion target in pancreatic carcinoma 4 homolog SMAD family member 4 SMAD 4 Smad4

External Links
UniProt P97471
EMBL U79748
CH466528
BC046584
AK004804
CCDS CCDS29337.1
RefSeq NP_032566.2
UniGene Mm.100399
PDB 3QSV
PDBsum 3QSV
ProteinModelPortal P97471
SMR P97471
BioGrid 201277
DIP DIP-29718N
IntAct P97471
MINT MINT-261841
PhosphoSite P97471
MaxQB P97471
PaxDb P97471
PRIDE P97471
Ensembl ENSMUST00000025393
ENSMUST00000114939
GeneID 17128
KEGG mmu:17128
UCSC uc008fou.1
CTD 4089
MGI MGI:894293
eggNOG NOG286923
GeneTree ENSGT00760000119091
HOGENOM HOG000286019
HOVERGEN HBG053353
InParanoid P97471
KO K04501
OMA PTEGHSI
OrthoDB EOG712TW5
TreeFam TF314923
Reactome REACT_202264
REACT_203510
REACT_203903
REACT_216222
REACT_216258
REACT_216792
REACT_220505
REACT_220566
REACT_220645
ChiTaRS Smad4
EvolutionaryTrace P97471
NextBio 291316
PRO PR:P97471
Proteomes UP000000589
Bgee P97471
CleanEx MM_SMAD4
ExpressionAtlas P97471
Genevestigator P97471
GO GO:0032444
GO:0005813
GO:0005737
GO:0000790
GO:0005634
GO:0071141
GO:0005667
GO:0003682
GO:0005518
GO:0000987
GO:0003677
GO:0046872
GO:0046982
GO:0042803
GO:0000977
GO:0001085
GO:0001076
GO:0003700
GO:0030616
GO:0009952
GO:0036302
GO:0003190
GO:0007411
GO:0030509
GO:0003360
GO:0001658
GO:0003279
GO:0008283
GO:0048589
GO:0060956
GO:0007492
GO:0042118
GO:0003198
GO:0048859
GO:0007369
GO:0001702
GO:0001701
GO:0001822
GO:0007498
GO:0072133
GO:0060548
GO:0030308
GO:0008285
GO:0042177
GO:0045892
GO:0072134
GO:0014033
GO:0048663
GO:0060021
GO:0030513
GO:0003251
GO:0010718
GO:0010862
GO:0060391
GO:0045944
GO:0045893
GO:0030511
GO:0051098
GO:0042127
GO:0051797
GO:0006357
GO:0032909
GO:0001666
GO:0048733
GO:0007183
GO:0060395
GO:0032525
GO:0048729
GO:0006366
GO:0007179
Gene3D 2.60.200.10
3.90.520.10
InterPro IPR013790
IPR003619
IPR013019
IPR017855
IPR001132
IPR008984
PANTHER PTHR13703
Pfam PF03165
PF03166
SMART SM00523
SM00524
SUPFAM SSF49879
SSF56366
PROSITE PS51075
PS51076

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0030509

BMP signaling pathway

PMID:11788714[1]

ECO:0000314

P

It is shown by figure 3 through a direct assay that Smad4 binds to a promoter for the homeodomain Dlx-3 that is responsive to signaling by BMP-2.

complete
CACAO 6367

GO:0007398

ectoderm development

PMID:11788714[1]

ECO:0000314

P

It is shown by figure 3 through a direct assay that Smad4 binds to a promoter for Dlx-3, which is known to regulate patterning in the embyronic ectoderm.

complete
CACAO 6368

GO:0042733

embryonic digit morphogenesis

PMID:23034633[2]

ECO:0000315

P

As shown in figures 1 and 2, inactivation of Smad4 leads to a lack of development in the skeletal portion of embryonic digits.

complete
CACAO 7501

involved_in

GO:0061614

pri-miRNA transcription by RNA polymerase II

PMID:23426367[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • regulates_transcription_of:(ENSEMBL:ENSMUSG00000065610)
  • occurs_in:(CL:0002618)
  • part_of:(GO:1903844)

Seeded From UniProt

complete

involved_in

GO:1905305

negative regulation of cardiac myofibril assembly

PMID:16151019[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:16151019[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060412

ventricular septum morphogenesis

PMID:16151019[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010614

negative regulation of cardiac muscle hypertrophy

PMID:16151019[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0003148

outflow tract septum morphogenesis

PMID:17628518[5]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:Q63961

P

Seeded From UniProt

complete

involved_in

GO:0070373

negative regulation of ERK1 and ERK2 cascade

PMID:16151019[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0003220

left ventricular cardiac muscle tissue morphogenesis

PMID:16151019[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:16330325[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:16330325[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006879

cellular iron ion homeostasis

PMID:16330325[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

part_of:(GO:0071773)

Seeded From UniProt

complete

involved_in

GO:0070102

interleukin-6-mediated signaling pathway

PMID:16330325[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000617

positive regulation of histone H3-K9 acetylation

PMID:16330325[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051571

positive regulation of histone H3-K4 methylation

PMID:16330325[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007179

transforming growth factor beta receptor signaling pathway

PMID:16330325[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0000182)

Seeded From UniProt

complete

involved_in

GO:0030509

BMP signaling pathway

PMID:16330325[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0000182)

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:18539898[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:18539898[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042733

embryonic digit morphogenesis

PMID:23034633[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:19366691[8]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:19366691[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0090575

RNA polymerase II transcription factor complex

PMID:19366691[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:21330551[9]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P43694

F

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

PMID:21330551[9]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P43694

F

Seeded From UniProt

complete

involved_in

GO:0060956

endocardial cell differentiation

PMID:21330551[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060391

positive regulation of SMAD protein signal transduction

PMID:14691138[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0062009

secondary palate development

PMID:14691138[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21330551[9]

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(UniProtKB:P41136)

Seeded From UniProt

complete

involved_in

GO:0042118

endothelial cell activation

PMID:21330551[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0036302

atrioventricular canal development

PMID:21330551[9]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:Q08369

P

Seeded From UniProt

complete

involved_in

GO:0010862

positive regulation of pathway-restricted SMAD protein phosphorylation

PMID:14691138[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010718

positive regulation of epithelial to mesenchymal transition

PMID:14691138[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:14691138[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:14691138[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0003279

cardiac septum development

PMID:21330551[9]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:Q08369

P

Seeded From UniProt

complete

involved_in

GO:0003251

positive regulation of cell proliferation involved in heart valve morphogenesis

PMID:21330551[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0003198

epithelial to mesenchymal transition involved in endocardial cushion formation

PMID:21330551[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0003190

atrioventricular valve formation

PMID:21330551[9]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:Q08369

P

Seeded From UniProt

complete

enables

GO:0001085

RNA polymerase II transcription factor binding

PMID:21330551[9]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P43694

F

Seeded From UniProt

complete

involved_in

GO:0072134

nephrogenic mesenchyme morphogenesis

PMID:15342483[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0072133

metanephric mesenchyme morphogenesis

PMID:15342483[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060548

negative regulation of cell death

PMID:15342483[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

PMID:9288972[12]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P70056

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0072520

seminiferous tubule development

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071559

response to transforming growth factor beta

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071333

cellular response to glucose stimulus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

P

Seeded From UniProt

complete

part_of

GO:0071141

SMAD protein complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

enables

GO:0070412

R-SMAD binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0070411

I-SMAD binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0070371

ERK1 and ERK2 cascade

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0070207

protein homotrimerization

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0061040

female gonad morphogenesis

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060395

SMAD protein signal transduction

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060065

uterus development

PMID:24739304[13]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1349428

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051797

regulation of hair follicle development

PMID:18692037[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386393

P

regulates_o_results_in_development_of:(EMAPA:17525)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051098

regulation of binding

PMID:15282343[15]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048859

formation of anatomical boundary

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048733

sebaceous gland development

PMID:18692037[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386393

P

results_in_development_of:(EMAPA:35754)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048729

tissue morphogenesis

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048663

neuron fate commitment

PMID:17698011[17]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386393,MGI:MGI:2386570

P

  • has_participant:(EMAPA:16797)
  • results_in_commitment_to:(CL:0000111)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048589

developmental growth

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

PMID:21724602[18]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0046881

positive regulation of follicle-stimulating hormone secretion

PMID:24739304[13]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1349428

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0046881

positive regulation of follicle-stimulating hormone secretion

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

enables

GO:0046332

SMAD binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:24739304[13]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1349428

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:18986983[19]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1321394

P

has_regulation_target:(MGI:MGI:1341800)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:17568773[20]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1347465
MGI:MGI:98725

P

has_regulation_target:(MGI:MGI:1351322)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:17159989[21]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:108051
MGI:MGI:1201674
MGI:MGI:1314872
MGI:MGI:98727

P

has_regulation_target:(MGI:MGI:3616404)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:18692037[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386393

P

  • regulates_o_occurs_in:(EMAPA:17525)
  • has_regulation_target:(MGI:MGI:2661061)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:9702197[22]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:19251704[23]

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(MGI:MGI:96429)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:16556916[24]

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(MGI:MGI:98495)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045893

positive regulation of transcription, DNA-templated

PMID:15282343[15]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

contributes_to

GO:0043565

sequence-specific DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0043199

sulfate binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

PMID:21724602[18]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042177

negative regulation of protein catabolic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042127

regulation of cell population proliferation

PMID:11809702[25]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:88039
MGI:MGI:97798

P

occurs_in:(EMAPA:32874)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042127

regulation of cell population proliferation

PMID:11809702[25]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:88039
MGI:MGI:97788

P

occurs_in:(EMAPA:32874)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042127

regulation of cell population proliferation

PMID:10708962[26]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:88039

P

occurs_in:(EMAPA:32874)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042127

regulation of cell population proliferation

PMID:10708962[26]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857697

P

occurs_in:(EMAPA:32874)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042060

wound healing

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035556

intracellular signal transduction

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0033686

positive regulation of luteinizing hormone secretion

PMID:24739304[13]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1349428

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0033686

positive regulation of luteinizing hormone secretion

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0032909

regulation of transforming growth factor beta2 production

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0032525

somite rostral/caudal axis specification

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

Seeded From UniProt

complete

part_of

GO:0032444

activin responsive factor complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

enables

GO:0031005

filamin binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

F

Seeded From UniProt

complete

enables

GO:0030616

transforming growth factor beta receptor, common-partner cytoplasmic mediator activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030513

positive regulation of BMP signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030511

positive regulation of transforming growth factor beta receptor signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030509

BMP signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030308

negative regulation of cell growth

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0017015

regulation of transforming growth factor beta receptor signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0014033

neural crest cell differentiation

PMID:19793887[27]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010666

positive regulation of cardiac muscle cell apoptotic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0009952

anterior/posterior pattern specification

PMID:15215210[28]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857691,MGI:MGI:2656539,MGI:MGI:2668393

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008585

female gonad development

PMID:24739304[13]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1349428

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008584

male gonad development

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008285

negative regulation of cell population proliferation

PMID:9506519[29]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:88039

P

regulates_o_occurs_in:(EMAPA:19252)|regulates_o_occurs_in:(EMAPA:32834)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008285

negative regulation of cell population proliferation

PMID:15925496[30]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:104903
MGI:MGI:88177

P

regulates_o_occurs_in:(EMAPA:28477)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008285

negative regulation of cell population proliferation

PMID:11197776[31]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:88039

P

regulates_o_occurs_in:(EMAPA:32874)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008285

negative regulation of cell population proliferation

PMID:10626800[32]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:88039

P

regulates_o_occurs_in:(EMAPA:17021)|regulates_o_occurs_in:(EMAPA:32874)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008283

cell population proliferation

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

occurs_in:(EMAPA:16039)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007498

mesoderm development

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007492

endoderm development

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007411

axon guidance

PMID:21300867[33]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386393,MGI:MGI:4459942

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007369

gastrulation

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007338

single fertilization

PMID:24739304[13]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1349428

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007283

spermatogenesis

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007183

SMAD protein complex assembly

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007179

transforming growth factor beta receptor signaling pathway

PMID:18212064[34]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:108051
MGI:MGI:98725
MGI:MGI:98834

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007179

transforming growth factor beta receptor signaling pathway

PMID:18212064[34]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:108051
MGI:MGI:98725
MGI:MGI:98834

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007179

transforming growth factor beta receptor signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006357

regulation of transcription by RNA polymerase II

PMID:12270938[35]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

part_of

GO:0005813

centrosome

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:19796622[36]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18692037[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

C

Seeded From UniProt

complete

enables

GO:0005518

collagen binding

PMID:14559231[37]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P08121
UniProtKB:Q01149
UniProtKB:Q3U962

F

Seeded From UniProt

complete

enables

GO:0003712

transcription coregulator activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:16556916[24]

ECO:0000314

direct assay evidence used in manual assertion

F

has_regulation_target:(MGI:MGI:98495)

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:14633973[38]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:12943993[39]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

contributes_to

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:18212064[34]

ECO:0000314

direct assay evidence used in manual assertion

F

has_participant:(MGI:MGI:87951)

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:15657445[40]

ECO:0000314

direct assay evidence used in manual assertion

F

has_participant:(MGI:MGI:87951)

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:15459107[41]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:14764653[42]

ECO:0000314

direct assay evidence used in manual assertion

F

has_participant:(MGI:MGI:95582)

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:12270938[35]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

F

Seeded From UniProt

complete

contributes_to

GO:0003677

DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0003360

brainstem development

PMID:21300867[33]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386393,MGI:MGI:4459942

P

results_in_development_of:(EMAPA:32790)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001822

kidney development

PMID:15342483[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3624262,MGI:MGI:3626290

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001702

gastrulation with mouth forming second

PMID:15215210[28]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857691,MGI:MGI:2656539,MGI:MGI:2668393

P

has_participant:(EMAPA:16039)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001701

in utero embryonic development

PMID:9420335[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1858049

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001666

response to hypoxia

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001658

branching involved in ureteric bud morphogenesis

PMID:15925496[30]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:104903
MGI:MGI:88177

P

has_participant:(EMAPA:28477)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001649

osteoblast differentiation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3033

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001541

ovarian follicle development

PMID:24739304[13]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1349428

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001541

ovarian follicle development

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0000987

proximal promoter sequence-specific DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

F

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

PMID:21724602[18]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q13485

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:24739304[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2386394

P

Seeded From UniProt

complete

involved_in

GO:0071559

response to transforming growth factor beta

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

part_of

GO:0071141

SMAD protein complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

enables

GO:0070412

R-SMAD binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0070411

I-SMAD binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

involved_in

GO:0070207

protein homotrimerization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0060395

SMAD protein signal transduction

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0043199

sulfate binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

involved_in

GO:0035556

intracellular signal transduction

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0032909

regulation of transforming growth factor beta2 production

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

part_of

GO:0032444

activin responsive factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

enables

GO:0030616

transforming growth factor beta receptor, common-partner cytoplasmic mediator activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

involved_in

GO:0030513

positive regulation of BMP signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0030511

positive regulation of transforming growth factor beta receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0030509

BMP signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0030308

negative regulation of cell growth

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0017015

regulation of transforming growth factor beta receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0007183

SMAD protein complex assembly

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

involved_in

GO:0007179

transforming growth factor beta receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

part_of

GO:0005813

centrosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

enables

GO:0003712

transcription coregulator activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

P

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0000987

proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13485
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A024R274
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

part_of

GO:0005813

centrosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A024R274
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A024R274
ensembl:ENSP00000341551

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013019

F

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013019

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001132
InterPro:IPR003619
InterPro:IPR013019
InterPro:IPR013790

P

Seeded From UniProt

complete

involved_in

GO:0007179

transforming growth factor beta receptor signaling pathway

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013019
InterPro:IPR036578

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-NUL-9625492

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

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