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MOUSE:BRCA1

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Brca1
Protein Name(s) Breast cancer type 1 susceptibility protein homolog
External Links
UniProt P48754
EMBL U31625
U35641
U32446
U36475
AL590996
U33835
CCDS CCDS25474.1
PIR I49350
RefSeq NP_033894.3
UniGene Mm.244975
ProteinModelPortal P48754
SMR P48754
BioGrid 198383
DIP DIP-41981N
IntAct P48754
STRING 10090.ENSMUSP00000102847
PhosphoSite P48754
MaxQB P48754
PRIDE P48754
Ensembl ENSMUST00000017290
GeneID 12189
KEGG mmu:12189
UCSC uc007lpd.2
CTD 672
MGI MGI:104537
eggNOG NOG274496
GeneTree ENSGT00440000034289
HOGENOM HOG000230969
HOVERGEN HBG050730
InParanoid P48754
KO K10605
OMA KGPSQCP
OrthoDB EOG79CXXK
TreeFam TF105060
Reactome REACT_198626
REACT_198629
REACT_230172
REACT_232842
REACT_251314
REACT_27235
REACT_75800
UniPathway UPA00143
NextBio 280581
PRO PR:P48754
Proteomes UP000000589
CleanEx MM_BRCA1
ExpressionAtlas P48754
Genevestigator P48754
GO GO:0031436
GO:0005813
GO:0005694
GO:0000793
GO:0000794
GO:0005737
GO:0005654
GO:0005886
GO:0030529
GO:0003684
GO:0016874
GO:0003723
GO:0044212
GO:0004842
GO:0008270
GO:0006974
GO:0007098
GO:0051298
GO:0043009
GO:0006310
GO:0006281
GO:0006260
GO:0009048
GO:0006633
GO:0008630
GO:0045717
GO:0035067
GO:0051572
GO:0051573
GO:0035066
GO:0051571
GO:2000617
GO:0051574
GO:2000620
GO:0070512
GO:0045944
GO:0051865
GO:0085020
GO:0044030
GO:0006349
Gene3D 3.30.40.10
3.40.50.10190
InterPro IPR011364
IPR025994
IPR001357
IPR018957
IPR001841
IPR013083
IPR017907
PANTHER PTHR13763
Pfam PF00533
PF12820
PF00097
PIRSF PIRSF001734
PRINTS PR00493
SMART SM00292
SM00184
SUPFAM SSF52113
PROSITE PS50172
PS00518
PS50089

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0006302

double-strand break repair

PMID:22186889[1]

ECO:0000315

P

Figure 4e. Higher levels of γH2A.X signal for double strand break repair.

complete
CACAO 3907

enables

GO:0070063

RNA polymerase binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

PMID:22186889[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000620

positive regulation of histone H4-K16 acetylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000617

positive regulation of histone H3-K9 acetylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0070512

positive regulation of histone H4-K20 methylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051574

positive regulation of histone H3-K9 methylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051573

negative regulation of histone H3-K9 methylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051572

negative regulation of histone H3-K4 methylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051571

positive regulation of histone H3-K4 methylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:20820192[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0044030

regulation of DNA methylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035067

negative regulation of histone acetylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035066

positive regulation of histone acetylation

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006349

regulation of gene expression by genetic imprinting

PMID:20820192[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0085020

protein K6-linked ubiquitination

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:0051865

protein autoubiquitination

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:0045717

negative regulation of fatty acid biosynthetic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

PMID:22549958[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

PMID:23039116[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

involved_in

GO:0071158

positive regulation of cell cycle arrest

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398

C

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349139
UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:0045717

negative regulation of fatty acid biosynthetic process

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:0043009

chordate embryonic development

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349142

P

Seeded From UniProt

complete

involved_in

GO:0035067

negative regulation of histone acetylation

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349139

P

Seeded From UniProt

complete

involved_in

GO:0035066

positive regulation of histone acetylation

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349139
UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398
WB:WBGene00000264

C

Seeded From UniProt

complete

involved_in

GO:0009048

dosage compensation by inactivation of X chromosome

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104537
PANTHER:PTN000349142

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
UniProtKB:P38398

C

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
TAIR:locus:2133109
UniProtKB:P38398

F

Seeded From UniProt

complete

involved_in

GO:0000724

double-strand break repair via homologous recombination

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000349139
TAIR:locus:2133109
UniProtKB:P38398
WB:WBGene00000264

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:2000620

positive regulation of histone H4-K16 acetylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:2000617

positive regulation of histone H3-K9 acetylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:2000378

negative regulation of reactive oxygen species metabolic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:18809582[6]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1902042

negative regulation of extrinsic apoptotic signaling pathway via death domain receptors

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0085020

protein K6-linked ubiquitination

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0072425

signal transduction involved in G2 DNA damage checkpoint

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071681

cellular response to indole-3-methanol

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071356

cellular response to tumor necrosis factor

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071158

positive regulation of cell cycle arrest

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0070512

positive regulation of histone H4-K20 methylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

enables

GO:0070063

RNA polymerase binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051865

protein autoubiquitination

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051573

negative regulation of histone H3-K9 methylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051571

positive regulation of histone H3-K4 methylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045766

positive regulation of angiogenesis

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045739

positive regulation of DNA repair

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045717

negative regulation of fatty acid biosynthetic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0044818

mitotic G2/M transition checkpoint

PMID:15254237[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043627

response to estrogen

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043009

chordate embryonic development

PMID:9171368[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1930613

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035066

positive regulation of histone acetylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0033147

negative regulation of intracellular estrogen receptor signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:16951165[9]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

enables

GO:0031625

ubiquitin protein ligase binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0031398

positive regulation of protein ubiquitination

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0016567

protein ubiquitination

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010628

positive regulation of gene expression

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010575

positive regulation of vascular endothelial growth factor production

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010212

response to ionizing radiation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0009048

dosage compensation by inactivation of X chromosome

PMID:12419249[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008630

intrinsic apoptotic signaling pathway in response to DNA damage

PMID:14654789[11]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007098

centrosome cycle

PMID:15123655[12]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:107799

P

occurs_in:(CL:0000057)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007059

chromosome segregation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006974

cellular response to DNA damage stimulus

PMID:23271346[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3696057

P

  • occurs_in:(EMAPA:35246)
  • occurs_in:(CL:1000428)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006302

double-strand break repair

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006301

postreplication repair

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

part_of

GO:0005759

mitochondrial matrix

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2218

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:11172592[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:12419249[10]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

F

Seeded From UniProt

complete

enables

GO:0003684

damaged DNA binding

PMID:11934988[15]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2218

F

Seeded From UniProt

complete

part_of

GO:0000800

lateral element

PMID:9774970[16]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

C

Seeded From UniProt

complete

part_of

GO:0000794

condensed nuclear chromosome

PMID:26490168[17]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0000794

condensed nuclear chromosome

PMID:20551173[18]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000017)

Seeded From UniProt

complete

part_of

GO:0000793

condensed chromosome

PMID:12913077[19]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(EMAPA:17972)
  • part_of:(CL:0000017)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000724

double-strand break repair via homologous recombination

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P38398

P

Seeded From UniProt

complete

involved_in

GO:2000620

positive regulation of histone H4-K16 acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:2000617

positive regulation of histone H3-K9 acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:2000378

negative regulation of reactive oxygen species metabolic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

C

Seeded From UniProt

complete

involved_in

GO:1902042

negative regulation of extrinsic apoptotic signaling pathway via death domain receptors

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0085020

protein K6-linked ubiquitination

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0072425

signal transduction involved in G2 DNA damage checkpoint

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0071681

cellular response to indole-3-methanol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0071356

cellular response to tumor necrosis factor

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0071158

positive regulation of cell cycle arrest

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

part_of

GO:0070531

BRCA1-A complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

C

Seeded From UniProt

complete

involved_in

GO:0070512

positive regulation of histone H4-K20 methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

enables

GO:0070063

RNA polymerase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

F

Seeded From UniProt

complete

involved_in

GO:0051865

protein autoubiquitination

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0051573

negative regulation of histone H3-K9 methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0051571

positive regulation of histone H3-K4 methylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0045766

positive regulation of angiogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0045739

positive regulation of DNA repair

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0045717

negative regulation of fatty acid biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

F

Seeded From UniProt

complete

involved_in

GO:0043627

response to estrogen

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

F

Seeded From UniProt

complete

involved_in

GO:0035066

positive regulation of histone acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0033147

negative regulation of intracellular estrogen receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

C

Seeded From UniProt

complete

enables

GO:0031625

ubiquitin protein ligase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

F

Seeded From UniProt

complete

part_of

GO:0031436

BRCA1-BARD1 complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

C

Seeded From UniProt

complete

involved_in

GO:0031398

positive regulation of protein ubiquitination

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

F

Seeded From UniProt

complete

involved_in

GO:0016567

protein ubiquitination

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0010575

positive regulation of vascular endothelial growth factor production

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0010212

response to ionizing radiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0008630

intrinsic apoptotic signaling pathway in response to DNA damage

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0007059

chromosome segregation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

involved_in

GO:0006301

postreplication repair

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

C

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

F

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

F

Seeded From UniProt

complete

part_of

GO:0000800

lateral element

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

C

Seeded From UniProt

complete

involved_in

GO:0000724

double-strand break repair via homologous recombination

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P38398
ensembl:ENSP00000418960

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364

F

Seeded From UniProt

complete

enables

GO:0004842

ubiquitin-protein transferase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364

C

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364
InterPro:IPR031099

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR031099

P

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011364

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018957

F

Seeded From UniProt

complete

involved_in

GO:0051298

centrosome duplication

PMID:10855792[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005813

centrosome

PMID:10855792[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-MMU-912468
Reactome:R-MMU-912449
Reactome:R-MMU-912431
Reactome:R-MMU-912423
Reactome:R-MMU-912421

ECO:0000304

author statement supported by traceable reference used in manual assertion





C

Seeded From UniProt

complete

involved_in

GO:0006629

lipid metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0443

P

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

involved_in

GO:0006631

fatty acid metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0276

P

Seeded From UniProt

complete

involved_in

GO:0007049

cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0131

P

Seeded From UniProt

complete

involved_in

GO:0006633

fatty acid biosynthetic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0275

P

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0233

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0016567

protein ubiquitination

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00143

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Shukla, PC et al. (2011) BRCA1 is an essential regulator of heart function and survival following myocardial infarction. Nat Commun 2 593 PubMed GONUTS page
  2. 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 Shukla, V et al. (2010) BRCA1 affects global DNA methylation through regulation of DNMT1. Cell Res. 20 1201-15 PubMed GONUTS page
  3. Wojtasz, L et al. (2012) Meiotic DNA double-strand breaks and chromosome asynapsis in mice are monitored by distinct HORMAD2-independent and -dependent mechanisms. Genes Dev. 26 958-73 PubMed GONUTS page
  4. Kogo, H et al. (2012) HORMAD2 is essential for synapsis surveillance during meiotic prophase via the recruitment of ATR activity. Genes Cells 17 897-912 PubMed GONUTS page
  5. 5.00 5.01 5.02 5.03 5.04 5.05 5.06 5.07 5.08 5.09 5.10 5.11 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  6. Maggi, LB Jr et al. (2008) Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome. Mol. Cell. Biol. 28 7050-65 PubMed GONUTS page
  7. Arlt, MF et al. (2004) BRCA1 is required for common-fragile-site stability via its G2/M checkpoint function. Mol. Cell. Biol. 24 6701-9 PubMed GONUTS page
  8. Ludwig, T et al. (1997) Targeted mutations of breast cancer susceptibility gene homologs in mice: lethal phenotypes of Brca1, Brca2, Brca1/Brca2, Brca1/p53, and Brca2/p53 nullizygous embryos. Genes Dev. 11 1226-41 PubMed GONUTS page
  9. Hulit, J et al. (2006) p27Kip1 repression of ErbB2-induced mammary tumor growth in transgenic mice involves Skp2 and Wnt/beta-catenin signaling. Cancer Res. 66 8529-41 PubMed GONUTS page
  10. 10.0 10.1 Ganesan, S et al. (2002) BRCA1 supports XIST RNA concentration on the inactive X chromosome. Cell 111 393-405 PubMed GONUTS page
  11. Aglipay, JA et al. (2003) A member of the Pyrin family, IFI16, is a novel BRCA1-associated protein involved in the p53-mediated apoptosis pathway. Oncogene 22 8931-8 PubMed GONUTS page
  12. Wang, X et al. (2004) Genetic interactions between Brca1 and Gadd45a in centrosome duplication, genetic stability, and neural tube closure. J. Biol. Chem. 279 29606-14 PubMed GONUTS page
  13. Sotiropoulou, PA et al. (2013) BRCA1 deficiency in skin epidermis leads to selective loss of hair follicle stem cells and their progeny. Genes Dev. 27 39-51 PubMed GONUTS page
  14. Bernard-Gallon, DJ et al. (2001) Brca1 and Brca2 protein expression patterns in different tissues of murine origin. Int. J. Oncol. 18 271-80 PubMed GONUTS page
  15. Celeste, A et al. (2002) Genomic instability in mice lacking histone H2AX. Science 296 922-7 PubMed GONUTS page
  16. Chen, J et al. (1998) Stable interaction between the products of the BRCA1 and BRCA2 tumor suppressor genes in mitotic and meiotic cells. Mol. Cell 2 317-28 PubMed GONUTS page
  17. Sun, X et al. (2016) FancJ (Brip1) loss-of-function allele results in spermatogonial cell depletion during embryogenesis and altered processing of crossover sites during meiotic prophase I in mice. Chromosoma 125 237-52 PubMed GONUTS page
  18. Kumar, R et al. (2010) Functional conservation of Mei4 for meiotic DNA double-strand break formation from yeasts to mice. Genes Dev. 24 1266-80 PubMed GONUTS page
  19. Wong, JC et al. (2003) Targeted disruption of exons 1 to 6 of the Fanconi Anemia group A gene leads to growth retardation, strain-specific microphthalmia, meiotic defects and primordial germ cell hypoplasia. Hum. Mol. Genet. 12 2063-76 PubMed GONUTS page
  20. 20.0 20.1 Zhang, H et al. (2000) VCP, a weak ATPase involved in multiple cellular events, interacts physically with BRCA1 in the nucleus of living cells. DNA Cell Biol. 19 253-63 PubMed GONUTS page