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MOUSE:BRCA1
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Brca1 | |
Protein Name(s) | Breast cancer type 1 susceptibility protein homolog | |
External Links | ||
UniProt | P48754 | |
EMBL | U31625 U35641 U32446 U36475 AL590996 U33835 | |
CCDS | CCDS25474.1 | |
PIR | I49350 | |
RefSeq | NP_033894.3 | |
UniGene | Mm.244975 | |
ProteinModelPortal | P48754 | |
SMR | P48754 | |
BioGrid | 198383 | |
DIP | DIP-41981N | |
IntAct | P48754 | |
STRING | 10090.ENSMUSP00000102847 | |
PhosphoSite | P48754 | |
MaxQB | P48754 | |
PRIDE | P48754 | |
Ensembl | ENSMUST00000017290 | |
GeneID | 12189 | |
KEGG | mmu:12189 | |
UCSC | uc007lpd.2 | |
CTD | 672 | |
MGI | MGI:104537 | |
eggNOG | NOG274496 | |
GeneTree | ENSGT00440000034289 | |
HOGENOM | HOG000230969 | |
HOVERGEN | HBG050730 | |
InParanoid | P48754 | |
KO | K10605 | |
OMA | KGPSQCP | |
OrthoDB | EOG79CXXK | |
TreeFam | TF105060 | |
Reactome | REACT_198626 REACT_198629 REACT_230172 REACT_232842 REACT_251314 REACT_27235 REACT_75800 | |
UniPathway | UPA00143 | |
NextBio | 280581 | |
PRO | PR:P48754 | |
Proteomes | UP000000589 | |
CleanEx | MM_BRCA1 | |
ExpressionAtlas | P48754 | |
Genevestigator | P48754 | |
GO | GO:0031436 GO:0005813 GO:0005694 GO:0000793 GO:0000794 GO:0005737 GO:0005654 GO:0005886 GO:0030529 GO:0003684 GO:0016874 GO:0003723 GO:0044212 GO:0004842 GO:0008270 GO:0006974 GO:0007098 GO:0051298 GO:0043009 GO:0006310 GO:0006281 GO:0006260 GO:0009048 GO:0006633 GO:0008630 GO:0045717 GO:0035067 GO:0051572 GO:0051573 GO:0035066 GO:0051571 GO:2000617 GO:0051574 GO:2000620 GO:0070512 GO:0045944 GO:0051865 GO:0085020 GO:0044030 GO:0006349 | |
Gene3D | 3.30.40.10 3.40.50.10190 | |
InterPro | IPR011364 IPR025994 IPR001357 IPR018957 IPR001841 IPR013083 IPR017907 | |
PANTHER | PTHR13763 | |
Pfam | PF00533 PF12820 PF00097 | |
PIRSF | PIRSF001734 | |
PRINTS | PR00493 | |
SMART | SM00292 SM00184 | |
SUPFAM | SSF52113 | |
PROSITE | PS50172 PS00518 PS50089 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0006302 |
double-strand break repair |
ECO:0000315 |
P |
Figure 4e. Higher levels of γH2A.X signal for double strand break repair. |
complete | |||||
enables |
GO:0070063 |
RNA polymerase binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003713 |
transcription coactivator activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000620 |
positive regulation of histone H4-K16 acetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000617 |
positive regulation of histone H3-K9 acetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070512 |
positive regulation of histone H4-K20 methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051574 |
positive regulation of histone H3-K9 methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051573 |
negative regulation of histone H3-K9 methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051572 |
negative regulation of histone H3-K4 methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051571 |
positive regulation of histone H3-K4 methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0044030 |
regulation of DNA methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035067 |
negative regulation of histone acetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035066 |
positive regulation of histone acetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006349 |
regulation of gene expression by genetic imprinting |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0085020 |
protein K6-linked ubiquitination |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051865 |
protein autoubiquitination |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045717 |
negative regulation of fatty acid biosynthetic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071158 |
positive regulation of cell cycle arrest |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045717 |
negative regulation of fatty acid biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043009 |
chordate embryonic development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035067 |
negative regulation of histone acetylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035066 |
positive regulation of histone acetylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009048 |
dosage compensation by inactivation of X chromosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104537 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000349139 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:2000620 |
positive regulation of histone H4-K16 acetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:2000617 |
positive regulation of histone H3-K9 acetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:2000378 |
negative regulation of reactive oxygen species metabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:1902042 |
negative regulation of extrinsic apoptotic signaling pathway via death domain receptors |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0085020 |
protein K6-linked ubiquitination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0072425 |
signal transduction involved in G2 DNA damage checkpoint |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0071681 |
cellular response to indole-3-methanol |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0071356 |
cellular response to tumor necrosis factor |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0071158 |
positive regulation of cell cycle arrest |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0070512 |
positive regulation of histone H4-K20 methylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0070063 |
RNA polymerase binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051865 |
protein autoubiquitination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051573 |
negative regulation of histone H3-K9 methylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051571 |
positive regulation of histone H3-K4 methylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045766 |
positive regulation of angiogenesis |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045739 |
positive regulation of DNA repair |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045717 |
negative regulation of fatty acid biosynthetic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0044818 |
mitotic G2/M transition checkpoint |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0043627 |
response to estrogen |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0043009 |
chordate embryonic development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1930613 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0035066 |
positive regulation of histone acetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0033147 |
negative regulation of intracellular estrogen receptor signaling pathway |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0031398 |
positive regulation of protein ubiquitination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0019899 |
enzyme binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0016567 |
protein ubiquitination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010628 |
positive regulation of gene expression |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010575 |
positive regulation of vascular endothelial growth factor production |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010212 |
response to ionizing radiation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0009048 |
dosage compensation by inactivation of X chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0008630 |
intrinsic apoptotic signaling pathway in response to DNA damage |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007098 |
centrosome cycle |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:107799 |
P |
occurs_in:(CL:0000057) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0007059 |
chromosome segregation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3696057 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006302 |
double-strand break repair |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006301 |
postreplication repair |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005759 |
mitochondrial matrix |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2218 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003713 |
transcription coactivator activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003684 |
damaged DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2218 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000800 |
lateral element |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000794 |
condensed nuclear chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000794 |
condensed nuclear chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000017) |
Seeded From UniProt |
complete | ||
part_of |
GO:0000793 |
condensed chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000620 |
positive regulation of histone H4-K16 acetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000617 |
positive regulation of histone H3-K9 acetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000378 |
negative regulation of reactive oxygen species metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:1902042 |
negative regulation of extrinsic apoptotic signaling pathway via death domain receptors |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0085020 |
protein K6-linked ubiquitination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0072425 |
signal transduction involved in G2 DNA damage checkpoint |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071681 |
cellular response to indole-3-methanol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071356 |
cellular response to tumor necrosis factor |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071158 |
positive regulation of cell cycle arrest |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0070531 |
BRCA1-A complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070512 |
positive regulation of histone H4-K20 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0070063 |
RNA polymerase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051865 |
protein autoubiquitination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051573 |
negative regulation of histone H3-K9 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051571 |
positive regulation of histone H3-K4 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045766 |
positive regulation of angiogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045739 |
positive regulation of DNA repair |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045717 |
negative regulation of fatty acid biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043627 |
response to estrogen |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035066 |
positive regulation of histone acetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033147 |
negative regulation of intracellular estrogen receptor signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0031436 |
BRCA1-BARD1 complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0031398 |
positive regulation of protein ubiquitination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0019899 |
enzyme binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010575 |
positive regulation of vascular endothelial growth factor production |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010212 |
response to ionizing radiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008630 |
intrinsic apoptotic signaling pathway in response to DNA damage |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007059 |
chromosome segregation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006301 |
postreplication repair |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003723 |
RNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003713 |
transcription coactivator activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000800 |
lateral element |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P38398 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051298 |
centrosome duplication |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005813 |
centrosome |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-MMU-912468 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006631 |
fatty acid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007049 |
cell cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006633 |
fatty acid biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00143 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Shukla, PC et al. (2011) BRCA1 is an essential regulator of heart function and survival following myocardial infarction. Nat Commun 2 593 PubMed GONUTS page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 Shukla, V et al. (2010) BRCA1 affects global DNA methylation through regulation of DNMT1. Cell Res. 20 1201-15 PubMed GONUTS page
- ↑ Wojtasz, L et al. (2012) Meiotic DNA double-strand breaks and chromosome asynapsis in mice are monitored by distinct HORMAD2-independent and -dependent mechanisms. Genes Dev. 26 958-73 PubMed GONUTS page
- ↑ Kogo, H et al. (2012) HORMAD2 is essential for synapsis surveillance during meiotic prophase via the recruitment of ATR activity. Genes Cells 17 897-912 PubMed GONUTS page
- ↑ 5.00 5.01 5.02 5.03 5.04 5.05 5.06 5.07 5.08 5.09 5.10 5.11 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Maggi, LB Jr et al. (2008) Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome. Mol. Cell. Biol. 28 7050-65 PubMed GONUTS page
- ↑ Arlt, MF et al. (2004) BRCA1 is required for common-fragile-site stability via its G2/M checkpoint function. Mol. Cell. Biol. 24 6701-9 PubMed GONUTS page
- ↑ Ludwig, T et al. (1997) Targeted mutations of breast cancer susceptibility gene homologs in mice: lethal phenotypes of Brca1, Brca2, Brca1/Brca2, Brca1/p53, and Brca2/p53 nullizygous embryos. Genes Dev. 11 1226-41 PubMed GONUTS page
- ↑ Hulit, J et al. (2006) p27Kip1 repression of ErbB2-induced mammary tumor growth in transgenic mice involves Skp2 and Wnt/beta-catenin signaling. Cancer Res. 66 8529-41 PubMed GONUTS page
- ↑ 10.0 10.1 Ganesan, S et al. (2002) BRCA1 supports XIST RNA concentration on the inactive X chromosome. Cell 111 393-405 PubMed GONUTS page
- ↑ Aglipay, JA et al. (2003) A member of the Pyrin family, IFI16, is a novel BRCA1-associated protein involved in the p53-mediated apoptosis pathway. Oncogene 22 8931-8 PubMed GONUTS page
- ↑ Wang, X et al. (2004) Genetic interactions between Brca1 and Gadd45a in centrosome duplication, genetic stability, and neural tube closure. J. Biol. Chem. 279 29606-14 PubMed GONUTS page
- ↑ Sotiropoulou, PA et al. (2013) BRCA1 deficiency in skin epidermis leads to selective loss of hair follicle stem cells and their progeny. Genes Dev. 27 39-51 PubMed GONUTS page
- ↑ Bernard-Gallon, DJ et al. (2001) Brca1 and Brca2 protein expression patterns in different tissues of murine origin. Int. J. Oncol. 18 271-80 PubMed GONUTS page
- ↑ Celeste, A et al. (2002) Genomic instability in mice lacking histone H2AX. Science 296 922-7 PubMed GONUTS page
- ↑ Chen, J et al. (1998) Stable interaction between the products of the BRCA1 and BRCA2 tumor suppressor genes in mitotic and meiotic cells. Mol. Cell 2 317-28 PubMed GONUTS page
- ↑ Sun, X et al. (2016) FancJ (Brip1) loss-of-function allele results in spermatogonial cell depletion during embryogenesis and altered processing of crossover sites during meiotic prophase I in mice. Chromosoma 125 237-52 PubMed GONUTS page
- ↑ Kumar, R et al. (2010) Functional conservation of Mei4 for meiotic DNA double-strand break formation from yeasts to mice. Genes Dev. 24 1266-80 PubMed GONUTS page
- ↑ Wong, JC et al. (2003) Targeted disruption of exons 1 to 6 of the Fanconi Anemia group A gene leads to growth retardation, strain-specific microphthalmia, meiotic defects and primordial germ cell hypoplasia. Hum. Mol. Genet. 12 2063-76 PubMed GONUTS page
- ↑ 20.0 20.1 Zhang, H et al. (2000) VCP, a weak ATPase involved in multiple cellular events, interacts physically with BRCA1 in the nucleus of living cells. DNA Cell Biol. 19 253-63 PubMed GONUTS page
c
- GO:0071356 ! cellular response to tumor necrosis factor
- GO:0071681 ! cellular response to indole-3-methanol
- GO:0007049 ! cell cycle
- GO:0005813 ! centrosome
- GO:0007098 ! centrosome cycle
- GO:0051298 ! centrosome duplication
- Chordata
- GO:0043009 ! chordate embryonic development
- GO:0003682 ! chromatin binding
- GO:0005694 ! chromosome
- GO:0007059 ! chromosome segregation
- GO:0000793 ! condensed chromosome
- GO:0000794 ! condensed nuclear chromosome
- Craniata
- GO:0005737 ! cytoplasm
d
- GO:0003684 ! damaged DNA binding
- GO:0003677 ! DNA binding
- GO:0006974 ! DNA damage response
- GO:0006310 ! DNA recombination
- GO:0006281 ! DNA repair
- GO:0009048 ! dosage compensation by inactivation of X chromosome
- GO:0000724 ! double-strand break repair via homologous recombination
- GO:0006302 ! double-strand break repair
g
i
m
n
- GO:0045717 ! negative regulation of fatty acid biosynthetic process
- GO:2000378 ! negative regulation of reactive oxygen species metabolic process
- GO:1902042 ! negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
- GO:0033147 ! negative regulation of intracellular estrogen receptor signaling pathway
- GO:0045892 ! negative regulation of DNA-templated transcription
- GO:0005654 ! nucleoplasm
- GO:0005634 ! nucleus
o
- GO:0051572 ! obsolete negative regulation of histone H3-K4 methylation
- GO:0051573 ! obsolete negative regulation of histone H3-K9 methylation
- GO:0035067 ! obsolete negative regulation of histone acetylation
- GO:0051574 ! obsolete positive regulation of histone H3-K9 methylation
- GO:0051571 ! obsolete positive regulation of histone H3-K4 methylation
- GO:0070512 ! obsolete positive regulation of histone H4-K20 methylation
- GO:0035066 ! obsolete positive regulation of histone acetylation
- GO:2000620 ! obsolete positive regulation of histone H4-K16 acetylation
- GO:2000617 ! obsolete positive regulation of histone H3-K9 acetylation
- GO:0044030 ! obsolete regulation of DNA methylation
- GO:0006349 ! obsolete regulation of gene expression by genomic imprinting
p
- GO:0005886 ! plasma membrane
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0010628 ! positive regulation of gene expression
- GO:0010575 ! positive regulation of vascular endothelial growth factor production
- GO:0045739 ! positive regulation of DNA repair
- GO:0071158 ! positive regulation of cell cycle arrest
- GO:0031398 ! positive regulation of protein ubiquitination
- GO:0045766 ! positive regulation of angiogenesis
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0006301 ! postreplication repair
- GO:0032991 ! protein-containing complex
- GO:0051865 ! protein autoubiquitination
- GO:0085020 ! protein K6-linked ubiquitination
- GO:0016567 ! protein ubiquitination
r
t