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Category:Team Biohazards

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StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
updatedbyinstructorHHV11:TRX1Rcgrimshaw, Team Biohazards2013-03-26 07:22:40 CDTGO:0019028 viral capsid (C)PMID:23408623ECO:0000314 direct assay evidence used in manual assertion

Figure 6.

challenge
updatedbyinstructorHHV11:TRX2Rcgrimshaw, Team Biohazards2013-03-26 07:19:24 CDTGO:0019028 viral capsid (C)PMID:23408623ECO:0000314 direct assay evidence used in manual assertion

Figure 6.

challenge
acceptableHHV11:US03Rcgrimshaw, Team Biohazards2013-03-26 07:15:14 CDTGO:0019033 viral tegument (C)PMID:23408623ECO:0000314 direct assay evidence used in manual assertion

Figure 6C

challenge
updatedbyinstructorHHV11:UL37Rcgrimshaw, Team Biohazards2013-03-25 10:13:00 CDTGO:0019033 viral tegument (C)PMID:23408623ECO:0000314 direct assay evidence used in manual assertion

Figure 6C

challenge
updatedbyinstructorHHV11:LTPRcgrimshaw, Team Biohazards2013-03-25 10:11:16 CDTGO:0019033 viral tegument (C)PMID:23408623ECO:0000314 direct assay evidence used in manual assertion

Figure 6C

challenge
acceptableHHV11:ICP0Rcgrimshaw, Team Biohazards2013-03-25 10:03:06 CDTGO:0019033 viral tegument (C)PMID:23408623ECO:0000314 direct assay evidence used in manual assertion

Figure 6C

challenge
acceptableHHV11:ICP4Rcgrimshaw, Team Biohazards2013-03-25 10:00:34 CDTGO:0019033 viral tegument (C)PMID:23408623ECO:0000314 direct assay evidence used in manual assertion

Figure 6C

challenge
unacceptableHHV11:VP26Rcgrimshaw, Team Biohazards2013-03-25 09:52:20 CDTGO:0019028 viral capsid (C)PMID:23408623ECO:0000314 direct assay evidence used in manual assertion

Fig 3.

challenge
acceptableCAEEL:Q94252Rcgrimshaw, Team Biohazards2013-03-25 08:58:09 CDTGO:0005737 cytoplasm (C)PMID:23392608ECO:0000314 direct assay evidence used in manual assertion

Supplemental Fig. S4A - The LIPL-4∷TagRFP protein fusion is observed in cytoplasmic bodies resembling autophagic granules.

challenge
acceptableCAEEL:Q94252Rcgrimshaw, Team Biohazards2013-03-25 08:32:03 CDTGO:0010508 positive regulation of autophagy (P)PMID:23392608ECO:0000314 direct assay evidence used in manual assertion

Figure 2(A). LIPL-4 activates autophagy.

challenge
acceptableECOLX:O50330Rcgrimshaw, Team Biohazards2013-03-16 16:35:41 CDTGO:0016887 ATPase activity (F)PMID:18539740ECO:0000314 direct assay evidence used in manual assertion

Figure 2. TrwK ATP hydrolase activity was monitored by the decrease of NADH absorbance at 340 nm

challenge
acceptableECOLX:Q2NKG6Kjswerdlow, Team Biohazards2013-03-05 12:50:25 CSTGO:0016021 integral to membrane (C)PMID:18539740ECO:0000314 direct assay evidence used in manual assertion

TrwK does not behave as an integral membrane protein(Paragraph) + Table 2

Researchers found that the addition of detergent and phospholipids didn't affect the solubility of TrwK in solution from which they infered that unlike homologs, TrwK was not an integral membrane protein.


challenge
acceptable9GAMM:A1YBN2Kjswerdlow, Team Biohazards2013-03-04 09:00:40 CSTGO:0016887 ATPase activity (F)PMID:20144229ECO:0000314 direct assay evidence used in manual assertion

Fig. 6 - ATP hydrolysis assay measured ATP concentration via ATPase assay.

challenge
acceptableECOLX:Q2NKG6Kjswerdlow, Team Biohazards2013-03-04 08:50:45 CSTGO:0009291 unidirectional conjugation (P)PMID:18539740ECO:0000315 mutant phenotype evidence used in manual assertion

Wild type TrwK showed a conjugation frequencies 4x10^-1 where a deletion in TrwK showed a conjugation frequency of 4x10^-6. This value is closer to the negative control of 4x10^-7 showing that TrwK is needed for conjugation.

challenge
acceptableECOLI:FTSKMpbroulidakis, Team Biohazards2013-03-04 08:43:21 CSTGO:0033676 double-stranded DNA-dependent ATPase activity (F)PMID:16916635ECO:0000315 mutant phenotype evidence used in manual assertion

As shown in figure 1C, wild type FtsK shows significant DNA-dependent ATPase activity in comparison to FtsK containing a mutation in the walker A motif, which sees significantly inhibited activity.

challenge
acceptableECOLX:Q2NKG6Kjswerdlow, Team Biohazards2013-03-04 08:30:28 CSTGO:0016887 ATPase activity (F)PMID:18539740ECO:0000314 direct assay evidence used in manual assertion

Fig. 2 - ATPase activity was monitored by decrease of NADH absorbance at 340 nm.

Fig. 3 - Kinetic analysis of ATPase activity

challenge
acceptableBACSU:YDDEMpbroulidakis, Team Biohazards2013-03-04 08:27:22 CSTGO:0009291 unidirectional conjugation (P)PMID:19734305ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2. ConE is seen as being required for unidirectional conjugation between Bacillus subtilis bacterial cells, as cells deleted for conE or containing mutated conE fail to mate.

challenge
acceptableBACSU:YDDEMpbroulidakis, Team Biohazards2013-03-04 08:15:14 CSTGO:0060187 cell pole (C)PMID:19734305ECO:0000314 direct assay evidence used in manual assertion

Figure 3. ConE bound to green fluorescent protein is seen localizing to the cell membrane, preferentially at the cell poles.

challenge

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Pages in category "Team Biohazards"

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