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CACAO
the intercollegiate annotation competition!
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| The Community Assessment of Community Annotation with Ontologies (CACAO) is a competition for teams of undergrads around the world to improve the functional annotation of genes. CACAO was developed and is currently run at Texas A&M University, along with many other institutions.
If you are interested in participating, please email us - ecoliwiki@gmail.com.
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Calendar of Rounds
| Inning |
Activity |
Start |
End |
Notes
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1
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annotation
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First annotation inning. Find and read a relevant paper, discuss possible annotations with your team, pick one and submit it!
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2
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open
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Look at the other teams' annotations. Something not right? Challenge them!
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3
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annotation
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You got challenges, instructor feedback... time for you to fix your annotation and get it approved!
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4
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annotation
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A new annotation round! Pick up another paper (or another figure from the same one), discuss possible annotations with your group, pick one and put it in!
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5
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challenge
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How did the other teams do? Check their annotations, go challenge!
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6
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annotation
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Check that feedback, those challenges. Fix your annotation!
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7
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annotation
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Here we go again: paper, team-based discussion, annotation!
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8
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challenge
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Time to check on those other teams. Did they do well? Last opportunity for a challenge. Gauntlets down!
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9
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annotation
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All bets in! Last opportunity to fix your annotation!
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CACAO Phage Hunters 2019
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- Don't forget - no binding terms (i.e. DNA binding, etc) & no response to terms (i.e. response to heat, etc)
Quick Links
Decision Tree: Experimental Codes (IMP, IDA, IGI, ISS)
Decision Tree: Sequence/Structure Codes (ISS, ISA, ISO, ISM)
Adding an Annotation Walkthrough
ECs for Common Experiments
- → Look through the helpful handouts for students shown above. This includes printable documents.
- For more help on evidence codes
Participating schools
Lecture Material
More background info can be found on the About CACAO page.
Virus-related GO terms
- For those of you interested in annotating proteins from viruses and phages:
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Subcategories
This category has the following 8 subcategories, out of 8 total.
