User:Cherylrood

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
updatedbyinstructor	ACIBA:C9D9L2	2017-02-17 15:22:15 CST	GO:0009405 pathogenesis (P)	PMID:25466824	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 6 These two graphs showed that both Wild-type and overexpressed uspA (Universal Stress Protein A) contributed to Acinetobacter baumannii (ATCC 17978) pneumonia pathogenesis and lethality in sepsis.	challenge
updatedbyinstructor	SALTY:USPA	2017-02-26 20:54:27 CST	GO:0009405 pathogenesis (P)	PMID:17081727	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 7A At a dosage of 10^6 Salmonella typhimurium C5, M29 (uspA mutant) was significantly less virulent compared to the wild type	challenge
updatedbyinstructor	NOSS1:Q8YP05	2017-02-26 23:00:29 CST	GO:1905157 positive regulation of photosynthesis (P)	PMID:27102494	ECO:0000315 mutant phenotype evidence used in manual assertion	Table 1. Alkylhydroperoxide reductase (ahpC) in Anabaena species (PCC7120) Table comparing PS I, PS II activity and respiration in wild type, AnΔahpC and An + ahpC.	challenge
updatedbyinstructor	NOSS1:Q8YP05	2017-03-05 15:37:35 CST	GO:0016163 nitrogenase activity (F)	PMID:27102494	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 4. Nitrogenase activity comparing wild type, Alkylhydroperoxide reductase(ahpC) An + ahpC and AnΔahpC strains of Anabaena species (PCC7120) under control and methyl viologen stress.	challenge
acceptable	EDWTA:A2TEZ4	2017-03-19 17:38:51 CDT	GO:0040010 positive regulation of growth rate (P)	PMID:27102497	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 1. Growth analysis of Edwardsiella tarda TX01 showed faster growth rate than TX01Δfur (ferric uptake regulator) mutant	challenge
acceptable	EDWTA:A2TEZ4	2017-03-19 17:41:13 CDT	GO:1900705 negative regulation of siderophore biosynthetic process (P)	PMID:27102497	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 2 Chromoazurol S (CAS) assay compares siderophore production of Edwardsiella tarda TX01 and TX01Δfur. TX01Δfur (Ferric uptake regulator) mutant had increased siderophore production.	challenge
acceptable	EDWTA:A2TEZ4	2017-03-24 01:07:42 CDT	GO:0009405 pathogenesis (P)	PMID:27102497	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 4a. In vivo infection study: Turbot (flatfish) were infected with a dose of Edwardsiella tarda TX01, TX01Δfur, or TX01ΔfurC. Plate counts of bacteria recovered from organs of TX01Δfur-infected fish were significantly lower than the TX01-infected fish at 24 and 48 hours post infection.	challenge
acceptable	ECOLX:F5AP03	2017-03-25 23:37:04 CDT	GO:0009405 pathogenesis (P)	PMID:22565007	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig 3. Recovered bacteria in the brains of infected ducks was significantly reduced for the ∆ibeB mutant strain Escherichia coli DE205B4 compared to wild-type strain DE205B	challenge
acceptable	ECOLX:Q6X972	2017-03-25 23:42:40 CDT	GO:0009405 pathogenesis (P)	PMID:20974831	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig 4. The Escherichia coli (DE205M) ∆ibeA mutant-infected ducks had significantly lower bacteria loads isolated from lungs and brains of ducks compared to those infected with wild type E. coli (DE205B).	challenge
acceptable	ECOLX:A0A152UJI2	2017-03-25 23:47:29 CDT	GO:0009405 pathogenesis (P)	PMID:25461694	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 4 Colonization of the Escherichia coli (E058 strain) ∆rstA mutant was significant lower than those of the wild-type E058 strain in the internal organs of chickens.	challenge
acceptable	ECOLX:A0A085PA38	2017-03-25 23:50:21 CDT	GO:0009405 pathogenesis (P)	PMID:23504015	ECO:0000315 mutant phenotype evidence used in manual assertion	Table 3. 100% Death in WT avian Escherichia coli (serotype O2 APEC E058) compared to 0% death of the E5058 ∆rfaH mutant after air sac infection	challenge
acceptable	ECOLX:E2QL90	2017-03-25 23:54:29 CDT	GO:0009405 pathogenesis (P)	PMID:25768126	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 3 Survival assay showed that seven-day-old ducks inoculated with Escherichia coli (DE205B) had lower survival rates than ducks inoculated with E. coli (DE205B) ΔibeR mutant	challenge

acceptable:8
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by Cherylrood

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
updatedbyinstructor	Cherylrood, Team Voldemort	ACIBA:C9D9L2	GO:0009405 - obsolete pathogenesis (P)	PMID:25466824	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 2 fixed by Cherylrood
unacceptable	CRoss2008, Team Dank Genes	MOUSE:GBRD	GO:0051932 - synaptic transmission, GABAergic (P)	PMID:25339733	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 4
updatedbyinstructor	CRoss2008, Team Dank Genes	MOUSE:GBRD	GO:0030424 - axon (C)	PMID:25339733	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 5 fixed by Cherylrood

2 annotations fixed by Cherylrood

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