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MOUSE:IRF1

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Irf1
Protein Name(s) Interferon regulatory factor 1

IRF-1

External Links
UniProt P15314
EMBL M21065
BC003821
CCDS CCDS24686.1
PIR A31595
RefSeq NP_001152868.1
NP_032416.1
UniGene Mm.105218
PDB 1IF1
PDBsum 1IF1
ProteinModelPortal P15314
SMR P15314
BioGrid 200784
IntAct P15314
PhosphoSite P15314
MaxQB P15314
PRIDE P15314
Ensembl ENSMUST00000019043
ENSMUST00000108920
GeneID 16362
KEGG mmu:16362
UCSC uc007iww.2
CTD 3659
MGI MGI:96590
eggNOG NOG42582
HOGENOM HOG000037937
HOVERGEN HBG003455
InParanoid P15314
KO K09444
OMA CKEEPEV
OrthoDB EOG72ZCFD
PhylomeDB P15314
TreeFam TF328512
Reactome REACT_198521
REACT_198649
REACT_198660
EvolutionaryTrace P15314
NextBio 289466
PRO PR:P15314
Proteomes UP000000589
Bgee P15314
CleanEx MM_IRF1
ExpressionAtlas P15314
Genevestigator P15314
GO GO:0005737
GO:0000790
GO:0005634
GO:0003677
GO:0000978
GO:0043565
GO:0003700
GO:0006915
GO:0043374
GO:0007050
GO:0035458
GO:0071260
GO:0051607
GO:0060333
GO:0045590
GO:0045629
GO:0045892
GO:0032728
GO:0045084
GO:0032825
GO:0045627
GO:0045944
GO:0045893
GO:0032481
GO:0002819
GO:2000564
GO:0010468
GO:0045088
GO:0034124
GO:0006351
Gene3D 1.10.10.10
InterPro IPR017431
IPR019817
IPR001346
IPR011991
Pfam PF00605
PIRSF PIRSF038196
PRINTS PR00267
SMART SM00348
PROSITE PS00601
PS51507

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:2000564

regulation of CD8-positive, alpha-beta T cell proliferation

PMID:21909274[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060333

interferon-gamma-mediated signaling pathway

PMID:21909274[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

PMID:20451243[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:20308629[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:18641303[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045590

negative regulation of regulatory T cell differentiation

PMID:18641303[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034124

regulation of MyD88-dependent toll-like receptor signaling pathway

PMID:17018642[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032728

positive regulation of interferon-beta production

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

involved_in

GO:0032481

positive regulation of type I interferon production

PMID:17018642[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007050

cell cycle arrest

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

involved_in

GO:0006915

apoptotic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:17018642[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:17018642[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1096873
MGI:MGI:1859179
MGI:MGI:96395
MGI:MGI:96590
PANTHER:PTN000942746
RGD:2920
UniProtKB:O14896
UniProtKB:P10914
UniProtKB:P14316
UniProtKB:Q02556
UniProtKB:Q13568
UniProtKB:Q14653
UniProtKB:Q15306
UniProtKB:Q92985
ZFIN:ZDB-GENE-041114-13
ZFIN:ZDB-GENE-070912-330

C

Seeded From UniProt

complete

involved_in

GO:0002376

immune system process

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1096873
MGI:MGI:1350924
MGI:MGI:1859179
MGI:MGI:1859212
MGI:MGI:96395
MGI:MGI:96590
PANTHER:PTN000942747
UniProtKB:P10914
UniProtKB:P14316
UniProtKB:Q02556
UniProtKB:Q92985
ZFIN:ZDB-GENE-040718-367
ZFIN:ZDB-GENE-070912-330

P

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1859212
PANTHER:PTN000942746
UniProtKB:P10914
UniProtKB:P14316
UniProtKB:Q02556
UniProtKB:Q14653
UniProtKB:Q15306
UniProtKB:Q92985
ZFIN:ZDB-GENE-070912-330

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071375

cellular response to peptide hormone stimulus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071356

cellular response to tumor necrosis factor

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071347

cellular response to interleukin-1

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060416

response to growth hormone

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051607

defense response to virus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:17159910[7]

ECO:0000314

direct assay evidence used in manual assertion

P

  • regulates_o_occurs_in:(CL:0000312)
  • has_regulation_target:(MGI:MGI:1355313)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045893

positive regulation of transcription, DNA-templated

PMID:14568984[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045084

positive regulation of interleukin-12 biosynthetic process

PMID:14568984[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857205

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045084

positive regulation of interleukin-12 biosynthetic process

PMID:14568984[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:17159910[7]

ECO:0000314

direct assay evidence used in manual assertion

F

has_input:(MGI:MGI:1355313)

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043374

CD8-positive, alpha-beta T cell differentiation

PMID:11359801[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857205

P

occurs_in:(EMAPA:18768)|occurs_in:(EMAPA:18767)|occurs_in:(EMAPA:16332)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042532

negative regulation of tyrosine phosphorylation of STAT protein

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035458

cellular response to interferon-beta

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0032728

positive regulation of interferon-beta production

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010942

positive regulation of cell death

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010468

regulation of gene expression

PMID:11359801[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857205

P

  • occurs_in:(CL:0000625)
  • has_regulation_target:(MGI:MGI:88138)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007249

I-kappaB kinase/NF-kappaB signaling

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007050

cell cycle arrest

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006915

apoptotic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:14568984[8]

ECO:0000305

curator inference used in manual assertion

GO:0003700

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:2920

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:17159910[7]

ECO:0000314

direct assay evidence used in manual assertion

F

has_regulation_target:(MGI:MGI:1355313)

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:14568984[8]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:14568984[8]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P10914

C

Seeded From UniProt

complete

involved_in

GO:0071260

cellular response to mechanical stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

involved_in

GO:0035458

cellular response to interferon-beta

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

involved_in

GO:0032728

positive regulation of interferon-beta production

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

involved_in

GO:0007050

cell cycle arrest

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

involved_in

GO:0006915

apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

P

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P10914
ensembl:ENSP00000245414

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017431
InterPro:IPR019817
InterPro:IPR031215

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017431
InterPro:IPR019817
InterPro:IPR031215

P

Seeded From UniProt

complete

involved_in

GO:0006915

apoptotic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR031215

P

Seeded From UniProt

complete

involved_in

GO:0008285

negative regulation of cell population proliferation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR031215

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001346

F

Seeded From UniProt

complete

involved_in

GO:0050776

regulation of immune response

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR031215

P

Seeded From UniProt

complete

involved_in

GO:0045629

negative regulation of T-helper 2 cell differentiation

PMID:11244049[10]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045627

positive regulation of T-helper 1 cell differentiation

PMID:11244049[10]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045088

regulation of innate immune response

PMID:21909274[1]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032825

positive regulation of natural killer cell differentiation

PMID:11244049[10]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0002819

regulation of adaptive immune response

PMID:21909274[1]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0002376

immune system process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0391

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0045087

innate immune response

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0399

P

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0051

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Brien, JD et al. (2011) Interferon regulatory factor-1 (IRF-1) shapes both innate and CD8(+) T cell immune responses against West Nile virus infection. PLoS Pathog. 7 e1002230 PubMed GONUTS page
  2. Dixit, E et al. (2010) Peroxisomes are signaling platforms for antiviral innate immunity. Cell 141 668-81 PubMed GONUTS page
  3. Stirnweiss, A et al. (2010) IFN regulatory factor-1 bypasses IFN-mediated antiviral effects through viperin gene induction. J. Immunol. 184 5179-85 PubMed GONUTS page
  4. 4.0 4.1 Fragale, A et al. (2008) IFN regulatory factor-1 negatively regulates CD4+ CD25+ regulatory T cell differentiation by repressing Foxp3 expression. J. Immunol. 181 1673-82 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 Negishi, H et al. (2006) Evidence for licensing of IFN-gamma-induced IFN regulatory factor 1 transcription factor by MyD88 in Toll-like receptor-dependent gene induction program. Proc. Natl. Acad. Sci. U.S.A. 103 15136-41 PubMed GONUTS page
  6. 6.0 6.1 6.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  7. 7.0 7.1 7.2 Byun, SJ et al. (2007) IFN-gamma upregulates expression of the mouse complement C1rA gene in keratinocytes via IFN-regulatory factor-1. J. Invest. Dermatol. 127 1187-96 PubMed GONUTS page
  8. 8.0 8.1 8.2 8.3 8.4 8.5 Liu, J et al. (2003) Differential regulation of interleukin (IL)-12 p35 and p40 gene expression and interferon (IFN)-gamma-primed IL-12 production by IFN regulatory factor 1. J. Exp. Med. 198 1265-76 PubMed GONUTS page
  9. 9.0 9.1 Ohteki, T et al. (2001) Overexpression of Bcl-2 differentially restores development of thymus-derived CD4-8+ T cells and intestinal intraepithelial T cells in IFN-regulatory factor-1-deficient mice. J. Immunol. 166 6509-13 PubMed GONUTS page
  10. 10.0 10.1 10.2 Taniguchi, T et al. (2001) IRF family of transcription factors as regulators of host defense. Annu. Rev. Immunol. 19 623-55 PubMed GONUTS page