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HUMAN:TYY1

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) YY1 (synonyms: INO80S)
Protein Name(s) Transcriptional repressor protein YY1

Delta transcription factor INO80 complex subunit S NF-E1 Yin and yang 1 YY-1

External Links
UniProt P25490
EMBL M77698
M76541
Z14077
BC037308
BC065366
CCDS CCDS9957.1
PIR A40350
RefSeq NP_003394.1
UniGene Hs.388927
Hs.603118
PDB 1UBD
1ZNM
4C5I
PDBsum 1UBD
1ZNM
4C5I
ProteinModelPortal P25490
SMR P25490
BioGrid 113360
DIP DIP-150N
IntAct P25490
MINT MINT-157439
STRING 9606.ENSP00000262238
PhosphoSite P25490
DMDM 3915889
MaxQB P25490
PaxDb P25490
PeptideAtlas P25490
PRIDE P25490
DNASU 7528
Ensembl ENST00000262238
GeneID 7528
KEGG hsa:7528
UCSC uc001ygy.2
CTD 7528
GeneCards GC14P101221
HGNC HGNC:12856
HPA CAB009392
HPA001119
MIM 600013
neXtProt NX_P25490
PharmGKB PA37445
eggNOG COG5048
GeneTree ENSGT00770000120559
HOGENOM HOG000008232
HOVERGEN HBG006823
InParanoid P25490
KO K09201
OMA GGRKWEQ
PhylomeDB P25490
TreeFam TF106493
SignaLink P25490
ChiTaRS YY1
EvolutionaryTrace P25490
GeneWiki YY1
GenomeRNAi 7528
NextBio 29449
PMAP-CutDB P25490
PRO PR:P25490
Proteomes UP000005640
Bgee P25490
CleanEx HS_YY1
ExpressionAtlas P25490
Genevestigator P25490
GO GO:0031011
GO:0016363
GO:0005634
GO:0031519
GO:0005667
GO:0003677
GO:0000400
GO:0003723
GO:0001078
GO:0003700
GO:0003713
GO:0003714
GO:0044212
GO:0008270
GO:0009952
GO:0048593
GO:0030154
GO:0006974
GO:0034644
GO:0051276
GO:0000724
GO:0000122
GO:0006357
GO:0034696
GO:0010225
GO:0006403
GO:0007283
Gene3D 3.30.160.60
InterPro IPR017114
IPR007087
IPR015880
IPR013087
Pfam PF00096
PIRSF PIRSF037113
SMART SM00355
PROSITE PS00028
PS50157

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0032688

negative regulation of interferon-beta production

PMID:22065573[1]

ECO:0000315

P

Fig. 2DE, Fig. 5BC, and Fig. 6

complete
CACAO 3240

GO:0005634

nucleus

PMID:22065573[1]

ECO:0000315

C

Fig. 5A and Fig. 6C

complete
CACAO 3241

GO:0010629

negative regulation of gene expression

PMID:22065573[1]

ECO:0000315

P

Fig. 5CD

complete
CACAO 3242

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

GO_REF:0000113

ECO:0005556

multiple sequence alignment evidence used in manual assertion

UniProtKB:E9Q3T6
UniProtKB:O14978
UniProtKB:O95125
UniProtKB:O95863
UniProtKB:P10071
UniProtKB:P10754
UniProtKB:P17028
UniProtKB:P28698
UniProtKB:P36508
UniProtKB:P41183
UniProtKB:P47806
UniProtKB:P52738
UniProtKB:Q02085
UniProtKB:Q05516
UniProtKB:Q08376
UniProtKB:Q0VDQ9
UniProtKB:Q16600
UniProtKB:Q61967
UniProtKB:Q6DJT9
UniProtKB:Q6NUN9
UniProtKB:Q86UQ0
UniProtKB:Q8CIV7
UniProtKB:Q8K0L9
UniProtKB:Q8K3J5
UniProtKB:Q8NI51
UniProtKB:Q91ZD1
UniProtKB:Q96RE9
UniProtKB:Q99684
UniProtKB:Q9BU19
UniProtKB:Q9ESP5
UniProtKB:Q9GZX5
UniProtKB:Q9H116
UniProtKB:Q9NQX1
UniProtKB:Q9NZL3
UniProtKB:Q9QY31
UniProtKB:Q9UM63
UniProtKB:Q9UPG8
UniProtKB:Q9UQR1
UniProtKB:Q9WTJ2
UniProtKB:Q9Y2X9
UniProtKB:Q9Y473
UniProtKB:Q9Y5A6

F

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:19274049[2]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0032688

negative regulation of interferon-beta production

PMID:16260628[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16260628[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:16260628[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:10791971[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0000987

proximal promoter sequence-specific DNA binding

PMID:16260628[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0010629

negative regulation of gene expression

PMID:22065573[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:22065573[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0001227

DNA-binding transcription repressor activity, RNA polymerase II-specific

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q00899

F

occurs_at:(SO:0001952)

Seeded From UniProt

complete

enables

GO:0046332

SMAD binding

PMID:15329343[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0001158

enhancer sequence-specific DNA binding

PMID:15329343[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0034644

cellular response to UV

PMID:18026119[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0031011

Ino80 complex

PMID:21303910[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0031011

Ino80 complex

PMID:18026119[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0010225

response to UV-C

PMID:18026119[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

PMID:18026119[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18026119[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0000724

double-strand break repair via homologous recombination

PMID:18026119[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0000400

four-way junction DNA binding

PMID:18026119[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002521
FB:FBgn0035997
MGI:MGI:99187
PANTHER:PTN000360827
RGD:3982
SGD:S000000270
UniProtKB:O15391
UniProtKB:Q2V3L3

F

Seeded From UniProt

complete

part_of

GO:0031519

PcG protein complex

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002521
MGI:MGI:99150
PANTHER:PTN000360827

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:99150
PANTHER:PTN000360827
RGD:3982

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002521
FB:FBgn0035997
MGI:MGI:99150
MGI:MGI:99187
PANTHER:PTN000360827
RGD:3982
SGD:S000000270
SGD:S000002450
UniProtKB:O15391
UniProtKB:P25490
UniProtKB:Q2V3L3

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002521
MGI:MGI:1277969
MGI:MGI:99150
PANTHER:PTN000360827
UniProtKB:P25490

F

Seeded From UniProt

complete

enables

GO:0000980

RNA polymerase II distal enhancer sequence-specific DNA binding

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002521
PANTHER:PTN000360827

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:99150
MGI:MGI:99187
PANTHER:PTN000360827
SGD:S000002450

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002521
MGI:MGI:99150
PANTHER:PTN000360827

C

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:9857059[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21729784[10]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:21729784[10]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:9857059[9]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1902894

negative regulation of pri-miRNA transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0051276

chromosome organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0048593

camera-type eye morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

part_of

GO:0031519

PcG protein complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

C

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0010225

response to UV-C

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0009952

anterior/posterior pattern specification

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0007283

spermatogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0006403

RNA localization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

F

Seeded From UniProt

complete

enables

GO:0001227

DNA-binding transcription repressor activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

C

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q00899
ensembl:ENSMUSP00000021692

P

Seeded From UniProt

complete

involved_in

GO:0071347

cellular response to interleukin-1

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

P

Seeded From UniProt

complete

involved_in

GO:0061052

negative regulation of cell growth involved in cardiac muscle cell development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

F

Seeded From UniProt

complete

involved_in

GO:0034696

response to prostaglandin F

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

P

Seeded From UniProt

complete

part_of

GO:0016363

nuclear matrix

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

C

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8CHJ4
ensembl:ENSRNOP00000005743

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013087

F

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

PMID:1655281[11]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:1655281[11]
Reactome:R-HSA-8866910

ECO:0000304

author statement supported by traceable reference used in manual assertion


P

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

PMID:1655281[11]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

PMID:1946405[12]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:1946405[12]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0016579

protein deubiquitination

Reactome:R-HSA-5688426

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-HSA-9009065
Reactome:R-HSA-8864453
Reactome:R-HSA-5689630
Reactome:R-HSA-5689544

ECO:0000304

author statement supported by traceable reference used in manual assertion




C

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0233

P

Seeded From UniProt

complete

involved_in

GO:0007283

spermatogenesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0744

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

involved_in

GO:0030154

cell differentiation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0221

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0016363

nuclear matrix

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0181

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Siednienko, J et al. (2011) Nuclear factor κB subunits RelB and cRel negatively regulate Toll-like receptor 3-mediated β-interferon production via induction of transcriptional repressor protein YY1. J. Biol. Chem. 286 44750-63 PubMed GONUTS page
  2. Vaquerizas, JM et al. (2009) A census of human transcription factors: function, expression and evolution. Nat. Rev. Genet. 10 252-63 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 Klar, M & Bode, J (2005) Enhanceosome formation over the beta interferon promoter underlies a remote-control mechanism mediated by YY1 and YY2. Mol. Cell. Biol. 25 10159-70 PubMed GONUTS page
  4. Ko, YG et al. (2000) Nucleolar localization of human methionyl-tRNA synthetase and its role in ribosomal RNA synthesis. J. Cell Biol. 149 567-74 PubMed GONUTS page
  5. 5.0 5.1 Lee, KH et al. (2004) SMAD-mediated modulation of YY1 activity regulates the BMP response and cardiac-specific expression of a GATA4/5/6-dependent chick Nkx2.5 enhancer. Development 131 4709-23 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 6.4 6.5 6.6 Wu, S et al. (2007) A YY1-INO80 complex regulates genomic stability through homologous recombination-based repair. Nat. Struct. Mol. Biol. 14 1165-72 PubMed GONUTS page
  7. Chen, L et al. (2011) Subunit organization of the human INO80 chromatin remodeling complex: an evolutionarily conserved core complex catalyzes ATP-dependent nucleosome remodeling. J. Biol. Chem. 286 11283-9 PubMed GONUTS page
  8. 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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