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HUMAN:SRBP2
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | SREBF2 (synonyms: BHLHD2, SREBP2) | |
Protein Name(s) | Sterol regulatory element-binding protein 2
SREBP-2 Class D basic helix-loop-helix protein 2 bHLHd2 Sterol regulatory element-binding transcription factor 2 Processed sterol regulatory element-binding protein 2 | |
External Links | ||
UniProt | Q12772 | |
EMBL | U02031 CT841522 AL021453 Z99716 Z99716 AL021453 BC051385 BC051799 BC056158 | |
CCDS | CCDS14023.1 | |
PIR | A49397 | |
RefSeq | NP_004590.2 | |
UniGene | Hs.443258 | |
PDB | 1UKL | |
PDBsum | 1UKL | |
ProteinModelPortal | Q12772 | |
SMR | Q12772 | |
BioGrid | 112599 | |
DIP | DIP-263N | |
IntAct | Q12772 | |
MINT | MINT-144301 | |
STRING | 9606.ENSP00000354476 | |
BindingDB | Q12772 | |
ChEMBL | CHEMBL1795166 | |
iPTMnet | Q12772 | |
PhosphoSite | Q12772 | |
BioMuta | SREBF2 | |
DMDM | 116242800 | |
EPD | Q12772 | |
MaxQB | Q12772 | |
PaxDb | Q12772 | |
PRIDE | Q12772 | |
DNASU | 6721 | |
Ensembl | ENST00000361204 | |
GeneID | 6721 | |
KEGG | hsa:6721 | |
UCSC | uc003bbi.5 | |
CTD | 6721 | |
GeneCards | SREBF2 | |
HGNC | HGNC:11290 | |
HPA | HPA031962 | |
MIM | 600481 | |
neXtProt | NX_Q12772 | |
PharmGKB | PA336 | |
eggNOG | KOG2588 ENOG410XSVP | |
GeneTree | ENSGT00390000017651 | |
HOGENOM | HOG000186198 | |
HOVERGEN | HBG061592 | |
InParanoid | Q12772 | |
KO | K09107 | |
OMA | QEEESCE | |
OrthoDB | EOG7D85VS | |
PhylomeDB | Q12772 | |
TreeFam | TF313894 | |
Reactome | [www.reactome.org/content/detail/R-HSA-1655829 R-HSA-1655829] [www.reactome.org/content/detail/R-HSA-1989781 R-HSA-1989781] [www.reactome.org/content/detail/R-HSA-2426168 R-HSA-2426168] [www.reactome.org/content/detail/R-HSA-381340 R-HSA-381340] | |
SIGNOR | Q12772 | |
EvolutionaryTrace | Q12772 | |
GeneWiki | SREBF2 | |
GenomeRNAi | 6721 | |
PMAP-CutDB | Q12772 | |
PRO | PR:Q12772 | |
Proteomes | UP000005640 | |
Bgee | Q12772 | |
CleanEx | HS_SREBF2 | |
ExpressionAtlas | Q12772 | |
Genevisible | Q12772 | |
GO | GO:0005737 GO:0005829 GO:0005783 GO:0005789 GO:0012507 GO:0000139 GO:0005654 GO:0005634 GO:0032937 GO:0070888 GO:0008022 GO:0000978 GO:0001078 GO:0071499 GO:0009267 GO:0008203 GO:0006629 GO:0090370 GO:0000122 GO:0010886 GO:1903955 GO:0045944 GO:2000188 GO:0072368 GO:1903146 GO:0055098 GO:0006351 | |
Gene3D | 4.10.280.10 | |
InterPro | IPR011598 | |
Pfam | PF00010 | |
SMART | SM00353 | |
SUPFAM | SSF47459 | |
PROSITE | PS50888 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000255 |
match to sequence model evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:1903955 |
positive regulation of protein targeting to mitochondrion |
ECO:0007001 |
high throughput mutant phenotypic evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:O60260) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1903146 |
regulation of autophagy of mitochondrion |
ECO:0007001 |
high throughput mutant phenotypic evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0005556 |
multiple sequence alignment evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0032937 |
SREBP-SCAP-Insig complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009267 |
cellular response to starvation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0001227 |
DNA-binding transcription repressor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0001952) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090370 |
negative regulation of cholesterol efflux |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0072368 |
regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071499 |
cellular response to laminar fluid shear stress |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071404 |
cellular response to low-density lipoprotein particle stimulus |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010886 |
positive regulation of cholesterol storage |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:Q07954) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032937 |
SREBP-SCAP-Insig complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
NOT|enables |
GO:0000247 |
C-8 sterol isomerase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
GO:0032933 |
SREBP signaling pathway |
ECO:0000315 |
P |
Figure 2B. RNA interference-mediated knockdown of SREBP-2 decreases the expression of sodium/iodide symporter (NIS) in human MCF-7 cells. |
complete | |||||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
GO:0032933 |
SREBP signaling pathway |
ECO:0000314 |
P |
Figure 4B and 4C. nSREBP-2 transcriptionally activates the 5′-Flanking Region of hNIS in human MCF-7 Cells |
complete | |||||
part_of |
GO:0043231 |
intracellular membrane-bounded organelle |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1902895 |
positive regulation of pri-miRNA transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q3U1N2 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046983 |
protein dimerization activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045540 |
regulation of cholesterol biosynthetic process |
Reactome:R-HSA-1655829 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
Reactome:R-HSA-2065550 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0005789 |
endoplasmic reticulum membrane |
Reactome:R-NUL-2317528 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-2426164 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0000139 |
Golgi membrane |
Reactome:R-NUL-1655840 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031410 |
cytoplasmic vesicle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008203 |
cholesterol metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008202 |
steroid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0012507 |
ER to Golgi transport vesicle membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000139 |
Golgi membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005789 |
endoplasmic reticulum membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Vaquerizas, JM et al. (2009) A census of human transcription factors: function, expression and evolution. Nat. Rev. Genet. 10 252-63 PubMed GONUTS page
- ↑ 2.0 2.1 Ivatt, RM et al. (2014) Genome-wide RNAi screen identifies the Parkinson disease GWAS risk locus SREBF1 as a regulator of mitophagy. Proc. Natl. Acad. Sci. U.S.A. 111 8494-9 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Yang, T et al. (2002) Crucial step in cholesterol homeostasis: sterols promote binding of SCAP to INSIG-1, a membrane protein that facilitates retention of SREBPs in ER. Cell 110 489-500 PubMed GONUTS page
- ↑ Jiang, P et al. (2014) Nutrient deprivation induces α-synuclein aggregation through endoplasmic reticulum stress response and SREBP2 pathway. Front Aging Neurosci 6 268 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 Zeng, L et al. (2004) Sterol-responsive element-binding protein (SREBP) 2 down-regulates ATP-binding cassette transporter A1 in vascular endothelial cells: a novel role of SREBP in regulating cholesterol metabolism. J. Biol. Chem. 279 48801-7 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Bell, RD et al. (2009) SRF and myocardin regulate LRP-mediated amyloid-beta clearance in brain vascular cells. Nat. Cell Biol. 11 143-53 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 Yabe, D et al. (2002) Insig-2, a second endoplasmic reticulum protein that binds SCAP and blocks export of sterol regulatory element-binding proteins. Proc. Natl. Acad. Sci. U.S.A. 99 12753-8 PubMed GONUTS page
- ↑ Sakai, J et al. (1997) Identification of complexes between the COOH-terminal domains of sterol regulatory element-binding proteins (SREBPs) and SREBP cleavage-activating protein. J. Biol. Chem. 272 20213-21 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 9.3 Vidal, H et al. (2003) Identification and pharmacological characterization of SRBP-2: a novel SR31747A-binding protein. Cancer Res. 63 4809-18 PubMed GONUTS page
- ↑ 10.0 10.1 Wen, G et al. (2016) Sterol regulatory element-binding proteins are regulators of the sodium/iodide symporter in mammary epithelial cells. J. Dairy Sci. PubMed GONUTS page
- ↑ Wang, H et al. (2002) Expression of a novel, sterol-insensitive form of sterol regulatory element binding protein 2 (SREBP2) in male germ cells suggests important cell- and stage-specific functions for SREBP targets during spermatogenesis. Mol. Cell. Biol. 22 8478-90 PubMed GONUTS page
- ↑ Hua, X et al. (1993) SREBP-2, a second basic-helix-loop-helix-leucine zipper protein that stimulates transcription by binding to a sterol regulatory element. Proc. Natl. Acad. Sci. U.S.A. 90 11603-7 PubMed GONUTS page
c
- GO:0000247 ! C-8 sterol isomerase activity
- Catarrhini
- GO:0009267 ! cellular response to starvation
- GO:0071499 ! cellular response to laminar fluid shear stress
- GO:0071404 ! cellular response to low-density lipoprotein particle stimulus
- GO:0008203 ! cholesterol metabolic process
- GO:0042632 ! cholesterol homeostasis
- Chordata
- Craniata
- GO:0005737 ! cytoplasm
- GO:0031410 ! cytoplasmic vesicle
- GO:0005829 ! cytosol
d
e
n
o
p
- GO:0010886 ! positive regulation of cholesterol storage
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:1903955 ! positive regulation of protein targeting to mitochondrion
- GO:1902895 ! positive regulation of miRNA transcription
- Primates
- GO:0046983 ! protein dimerization activity
r
s