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CACAO
the intercollegiate annotation competition!
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| The Community Assessment of Community Annotation with Ontologies (CACAO) is a competition for teams of undergrads around the world to improve the functional annotation of genes. CACAO was developed and is currently run at Texas A&M University, along with many other institutions.
If you are interested in participating, please email us - ecoliwiki@gmail.com.
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Calendar of Rounds
| Inning |
Activity |
Start |
End |
Notes
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0
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instruction
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First week of classes at TAMU. Introduction
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0
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instruction
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Training Continued
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1
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annotation
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Requirement: one correct annotation per team by the end of class on the 29th
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1
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open
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2
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annotation
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Goal: 5 individual annotations submitted by end of round
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2
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challenge
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Goal: 2 challenges submitted by end of round
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3
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annotation
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TAMU Requirement: 40 annotation points accepted by end of round
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3
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challenge
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4
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annotation
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Spring Break
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4
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open
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Goal: 60 annotation points accepted by end of round
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5
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annotation
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5
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challenge
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Goal: 70 annotation points accepted by end of round
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6
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open
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TAMU Requirement: 80 accepted annotation points by end of round
TAMU Q drop date April 15th
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7
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instruction
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No class
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instruction
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Final Class. Evaluations. Chocolate.
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CACAO Spring 2019
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- Don't forget - no binding terms (i.e. DNA binding, etc) & no response to terms (i.e. response to heat, etc)
Quick Links
Decision Tree: Experimental Codes (IMP, IDA, IGI, ISS)
Decision Tree: Sequence/Structure Codes (ISS, ISA, ISO, ISM)
Adding an Annotation Walkthrough
ECs for Common Experiments
- → Look through the helpful handouts for students shown above. This includes printable documents.
- For more help on evidence codes
Participating schools
Lecture Material
More background info can be found on the About CACAO page.
Virus-related GO terms
- For those of you interested in annotating proteins from viruses and phages:
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Subcategories
This category has the following 4 subcategories, out of 4 total.
