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CHICK:HDAC1
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | HDAC1 (synonyms: HDAC1A) | |
Protein Name(s) | Histone deacetylase 1
HD1 | |
External Links | ||
UniProt | P56517 | |
EMBL | AF039751 AF043328 AF044169 | |
RefSeq | NP_989487.1 | |
UniGene | Gga.10603 | |
ProteinModelPortal | P56517 | |
BioGrid | 675010 | |
STRING | 9031.ENSGALP00000005212 | |
PaxDb | P56517 | |
PRIDE | P56517 | |
Ensembl | ENSGALT00000005221 | |
GeneID | 373961 | |
KEGG | gga:373961 | |
CTD | 3065 | |
eggNOG | COG0123 | |
GeneTree | ENSGT00530000062889 | |
HOGENOM | HOG000225180 | |
HOVERGEN | HBG057112 | |
InParanoid | P56517 | |
KO | K06067 | |
OMA | HASCVKF | |
OrthoDB | EOG7DNNTW | |
PhylomeDB | P56517 | |
TreeFam | TF106171 | |
BRENDA | 3.5.1.98 | |
Reactome | REACT_271785 REACT_282783 REACT_286472 REACT_311887 REACT_320040 REACT_320742 REACT_326801 REACT_340836 REACT_344213 | |
NextBio | 20813492 | |
PRO | PR:P56517 | |
Proteomes | UP000000539 | |
GO | GO:0005737 GO:0005829 GO:0000118 GO:0005634 GO:0016581 GO:0016580 GO:0001047 GO:0004407 GO:0032041 GO:0000978 GO:0000980 GO:0001106 GO:0008134 GO:0043044 GO:0016568 GO:0070933 GO:0043922 GO:0060766 GO:0008284 GO:0010870 GO:0045944 GO:0006351 | |
Gene3D | 3.40.800.20 | |
InterPro | IPR000286 IPR003084 IPR023801 | |
PANTHER | PTHR10625 | |
Pfam | PF00850 | |
PIRSF | PIRSF037913 | |
PRINTS | PR01270 PR01271 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0070933 |
histone H4 deacetylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:108086 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070932 |
histone H3 deacetylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:108086 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0070822 |
Sin3-type complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0015805 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002578320 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0015805 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000118 |
histone deacetylase complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0015805 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:2001243 |
negative regulation of intrinsic apoptotic signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:1990841 |
promoter-specific chromatin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090090 |
negative regulation of canonical Wnt signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070933 |
histone H4 deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070932 |
histone H3 deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0070888 |
E-box binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061198 |
fungiform papilla formation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061029 |
eyelid development in camera-type eye |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048714 |
positive regulation of oligodendrocyte differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043124 |
negative regulation of I-kappaB kinase/NF-kappaB signaling |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043066 |
negative regulation of apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042733 |
embryonic digit morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0035851 |
Krueppel-associated box domain binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030182 |
neuron differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0021766 |
hippocampus development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0019213 |
deacetylase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0017053 |
transcriptional repressor complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016581 |
NuRD complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009913 |
epidermal cell differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008284 |
positive regulation of cell population proliferation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007623 |
circadian rhythm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007492 |
endoderm development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003714 |
transcription corepressor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003682 |
chromatin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001103 |
RNA polymerase II repressing transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000792 |
heterochromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0000118 |
histone deacetylase complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O09106 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090090 |
negative regulation of canonical Wnt signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070933 |
histone H4 deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070932 |
histone H3 deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0070491 |
repressing transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060766 |
negative regulation of androgen receptor signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0052548 |
regulation of endopeptidase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0051059 |
NF-kappaB binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0047485 |
protein N-terminus binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043922 |
negative regulation by host of viral transcription |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042826 |
histone deacetylase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0033613 |
activating transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0033558 |
protein deacetylase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0019899 |
enzyme binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0016581 |
NuRD complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016580 |
Sin3 complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016575 |
histone deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010870 |
positive regulation of receptor biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010629 |
negative regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008284 |
positive regulation of cell population proliferation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006476 |
protein deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006346 |
methylation-dependent chromatin silencing |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003714 |
transcription corepressor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0002039 |
p53 binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001103 |
RNA polymerase II repressing transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001085 |
RNA polymerase II transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001046 |
core promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000979 |
RNA polymerase II core promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000785 |
chromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13547 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0051059 |
NF-kappaB binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6IT96 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6IT96 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016575 |
histone deacetylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0032041 |
NAD-dependent histone deacetylase activity (H3-K14 specific) |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000118 |
histone deacetylase complex |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Verdin, E et al. (2003) Class II histone deacetylases: versatile regulators. Trends Genet. 19 286-93 PubMed GONUTS page
c
- Chordata
- GO:0000785 ! chromatin
- GO:0003682 ! chromatin binding
- GO:0006325 ! chromatin organization
- GO:0032922 ! circadian regulation of gene expression
- GO:0007623 ! circadian rhythm
- Coelurosauria
- GO:0001046 ! core promoter sequence-specific DNA binding
- Craniata
- GO:0005737 ! cytoplasm
- GO:0005829 ! cytosol
d
e
h
- GO:0000792 ! heterochromatin
- GO:0021766 ! hippocampus development
- GO:0000118 ! histone deacetylase complex
- GO:0004407 ! histone deacetylase activity
- GO:0042826 ! histone deacetylase binding
- GO:0032041 ! histone H3K14 deacetylase activity, NAD-dependent
- GO:0043922 ! host-mediated suppression of viral transcription
- GO:0016787 ! hydrolase activity
m
n
- GO:2001243 ! negative regulation of intrinsic apoptotic signaling pathway
- GO:0010629 ! negative regulation of gene expression
- GO:0043066 ! negative regulation of apoptotic process
- GO:0060766 ! negative regulation of androgen receptor signaling pathway
- GO:0000122 ! negative regulation of transcription by RNA polymerase II
- GO:0045892 ! negative regulation of DNA-templated transcription
- GO:0043124 ! negative regulation of canonical NF-kappaB signal transduction
- GO:0090090 ! negative regulation of canonical Wnt signaling pathway
- Neognathae
- GO:0043025 ! neuronal cell body
- GO:0030182 ! neuron differentiation
- GO:0051059 ! NF-kappaB binding
- GO:0000790 ! nuclear chromatin
- GO:0005654 ! nucleoplasm
- GO:0005634 ! nucleus
- GO:0016581 ! NuRD complex
o
p
- GO:0002039 ! p53 binding
- Phasianidae
- Phasianinae
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0048714 ! positive regulation of oligodendrocyte differentiation
- GO:0008284 ! positive regulation of cell population proliferation
- GO:1990841 ! promoter-specific chromatin binding
- GO:0032991 ! protein-containing complex
- GO:0006476 ! protein deacetylation
- GO:0033558 ! protein lysine deacetylase activity
r
- GO:0006357 ! regulation of transcription by RNA polymerase II
- GO:0052548 ! regulation of endopeptidase activity
- GO:0070491 ! repressing transcription factor binding
- GO:0000978 ! RNA polymerase II cis-regulatory region sequence-specific DNA binding
- GO:0000979 ! RNA polymerase II core promoter sequence-specific DNA binding
- GO:0001085 ! RNA polymerase II transcription factor binding
- GO:0001103 ! RNA polymerase II repressing transcription factor binding
t
- Theropoda
- GO:0003714 ! transcription corepressor activity
- GO:0005667 ! transcription regulator complex
- GO:0008134 ! transcription factor binding
- GO:0000976 ! transcription cis-regulatory region binding
- GO:0017053 ! transcription repressor complex
- GO:0044212 ! transcription regulatory region DNA binding