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CHICK:HDAC1

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) HDAC1 (synonyms: HDAC1A)
Protein Name(s) Histone deacetylase 1

HD1

External Links
UniProt P56517
EMBL AF039751
AF043328
AF044169
RefSeq NP_989487.1
UniGene Gga.10603
ProteinModelPortal P56517
BioGrid 675010
STRING 9031.ENSGALP00000005212
PaxDb P56517
PRIDE P56517
Ensembl ENSGALT00000005221
GeneID 373961
KEGG gga:373961
CTD 3065
eggNOG COG0123
GeneTree ENSGT00530000062889
HOGENOM HOG000225180
HOVERGEN HBG057112
InParanoid P56517
KO K06067
OMA HASCVKF
OrthoDB EOG7DNNTW
PhylomeDB P56517
TreeFam TF106171
BRENDA 3.5.1.98
Reactome REACT_271785
REACT_282783
REACT_286472
REACT_311887
REACT_320040
REACT_320742
REACT_326801
REACT_340836
REACT_344213
NextBio 20813492
PRO PR:P56517
Proteomes UP000000539
GO GO:0005737
GO:0005829
GO:0000118
GO:0005634
GO:0016581
GO:0016580
GO:0001047
GO:0004407
GO:0032041
GO:0000978
GO:0000980
GO:0001106
GO:0008134
GO:0043044
GO:0016568
GO:0070933
GO:0043922
GO:0060766
GO:0008284
GO:0010870
GO:0045944
GO:0006351
Gene3D 3.40.800.20
InterPro IPR000286
IPR003084
IPR023801
PANTHER PTHR10625
Pfam PF00850
PIRSF PIRSF037913
PRINTS PR01270
PR01271

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0070933

histone H4 deacetylation

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:108086
MGI:MGI:1097691
MGI:MGI:1343091
PANTHER:PTN002578320
PomBase:SPAC3G9.07c
SGD:S000005274
SGD:S000006272
UniProtKB:G5EB64
UniProtKB:Q13547

P

Seeded From UniProt

complete

involved_in

GO:0070932

histone H3 deacetylation

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:108086
MGI:MGI:1097691
PANTHER:PTN002578320
RGD:1309799
RGD:619976
RGD:619977
SGD:S000005274
TAIR:locus:2098115
UniProtKB:G5EB64
UniProtKB:Q13547

P

Seeded From UniProt

complete

part_of

GO:0070822

Sin3-type complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015805
PANTHER:PTN000066122
PomBase:SPBC36.05c
SGD:S000005274
UniProtKB:Q13547
UniProtKB:Q92769

C

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002578320
PomBase:SPBC36.05c
SGD:S000005274
SGD:S000006272
UniProtKB:O15379
UniProtKB:Q13547
UniProtKB:Q92769
WB:WBGene00001834

P

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015805
FB:FBgn0025825
MGI:MGI:108086
MGI:MGI:1097691
PANTHER:PTN002578320
PomBase:SPAC3G9.07c
PomBase:SPBC36.05c
RGD:1309799
RGD:619976
SGD:S000003162
SGD:S000005274
TAIR:locus:2162017
UniProtKB:G5EB64
UniProtKB:O15379
UniProtKB:Q13547
UniProtKB:Q7K6A1
UniProtKB:Q92769
WB:WBGene00001834
dictyBase:DDB_G0270338

F

Seeded From UniProt

complete

part_of

GO:0000118

histone deacetylase complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015805
MGI:MGI:108086
PANTHER:PTN002578320
PomBase:SPAC3G9.07c
PomBase:SPBC36.05c
SGD:S000003162
SGD:S000005274
SGD:S000006272
UniProtKB:Q13547
UniProtKB:Q92769
WB:WBGene00001834

C

Seeded From UniProt

complete

involved_in

GO:2001243

negative regulation of intrinsic apoptotic signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

enables

GO:1990841

promoter-specific chromatin binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

involved_in

GO:0090090

negative regulation of canonical Wnt signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0070933

histone H4 deacetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0070932

histone H3 deacetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

enables

GO:0070888

E-box binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

involved_in

GO:0061198

fungiform papilla formation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0061029

eyelid development in camera-type eye

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0048714

positive regulation of oligodendrocyte differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0043124

negative regulation of I-kappaB kinase/NF-kappaB signaling

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0043066

negative regulation of apoptotic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

part_of

GO:0043025

neuronal cell body

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

involved_in

GO:0042733

embryonic digit morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

enables

GO:0035851

Krueppel-associated box domain binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

involved_in

GO:0032922

circadian regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0030182

neuron differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0021766

hippocampus development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

enables

GO:0019213

deacetylase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

part_of

GO:0017053

transcriptional repressor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

part_of

GO:0016581

NuRD complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

involved_in

GO:0009913

epidermal cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0008284

positive regulation of cell population proliferation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

involved_in

GO:0007623

circadian rhythm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

involved_in

GO:0007492

endoderm development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

enables

GO:0001103

RNA polymerase II repressing transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

F

Seeded From UniProt

complete

part_of

GO:0000792

heterochromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

P

Seeded From UniProt

complete

part_of

GO:0000118

histone deacetylase complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O09106
ensembl:ENSMUSP00000099657

C

Seeded From UniProt

complete

involved_in

GO:0090090

negative regulation of canonical Wnt signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0070933

histone H4 deacetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0070932

histone H3 deacetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

enables

GO:0070491

repressing transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

involved_in

GO:0060766

negative regulation of androgen receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0052548

regulation of endopeptidase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

enables

GO:0051059

NF-kappaB binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0047485

protein N-terminus binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

involved_in

GO:0043922

negative regulation by host of viral transcription

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

enables

GO:0042826

histone deacetylase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0033613

activating transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0033558

protein deacetylase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

part_of

GO:0016581

NuRD complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

part_of

GO:0016580

Sin3 complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

involved_in

GO:0016575

histone deacetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0010870

positive regulation of receptor biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0010629

negative regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0008284

positive regulation of cell population proliferation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

involved_in

GO:0006476

protein deacetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

involved_in

GO:0006346

methylation-dependent chromatin silencing

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0002039

p53 binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0001103

RNA polymerase II repressing transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0001085

RNA polymerase II transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0001046

core promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0000979

RNA polymerase II core promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

part_of

GO:0000785

chromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q13547
ensembl:ENSP00000362649

P

Seeded From UniProt

complete

enables

GO:0051059

NF-kappaB binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6IT96
ensembl:ENSP00000362649

F

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q6IT96
ensembl:ENSP00000362649

C

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003084

F

Seeded From UniProt

complete

involved_in

GO:0016575

histone deacetylation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003084

P

Seeded From UniProt

complete

enables

GO:0032041

NAD-dependent histone deacetylase activity (H3-K14 specific)

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.1.98

F

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.1.98

F

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

PMID:12711221[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:12711221[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:12711221[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:12711221[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

PMID:12711221[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0000118

histone deacetylase complex

PMID:12711221[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0156

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 Verdin, E et al. (2003) Class II histone deacetylases: versatile regulators. Trends Genet. 19 286-93 PubMed GONUTS page