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CAEEL:PMK1
Contents
Species (Taxon ID) | Caenorhabditis elegans. (6239) | |
Gene Name(s) | pmk-1 | |
Protein Name(s) | Mitogen-activated protein kinase pmk-1
Stress-activated protein kinase pmk-1 p38 MAP kinase 1 | |
External Links | ||
UniProt | Q17446 | |
EMBL | FO080124 | |
PIR | T29750 | |
RefSeq | NP_501365.1 | |
UniGene | Cel.12534 | |
ProteinModelPortal | Q17446 | |
SMR | Q17446 | |
BioGrid | 56238 | |
DIP | DIP-26892N | |
IntAct | Q17446 | |
MINT | MINT-1037719 | |
STRING | 6239.B0218.3 | |
PaxDb | Q17446 | |
PRIDE | Q17446 | |
EnsemblMetazoa | B0218.3 | |
GeneID | 191743 | |
KEGG | cel:CELE_B0218.3 | |
UCSC | B0218.3 | |
CTD | 191743 | |
WormBase | B0218.3 | |
eggNOG | COG0515 | |
GeneTree | ENSGT00550000074271 | |
HOGENOM | HOG000233024 | |
InParanoid | Q17446 | |
KO | K04441 | |
OMA | FQKNVAF | |
OrthoDB | EOG7PCJGV | |
PhylomeDB | Q17446 | |
Reactome | REACT_183100 REACT_184347 REACT_239816 REACT_242972 REACT_246696 REACT_249288 REACT_250015 REACT_250046 REACT_255121 REACT_271173 | |
SignaLink | Q17446 | |
NextBio | 950180 | |
PRO | PR:Q17446 | |
Proteomes | UP000001940 | |
GO | GO:0005829 GO:0005634 GO:0005524 GO:0004707 GO:0004672 GO:0004674 GO:0008134 GO:0050829 GO:0050830 GO:0006972 GO:0045087 GO:0035556 GO:0000165 GO:0038066 GO:0018105 GO:1900182 GO:0045944 GO:1902097 GO:0012501 GO:0006468 GO:0006970 GO:0000302 GO:0000303 | |
InterPro | IPR011009 IPR003527 IPR008352 IPR000719 IPR017441 IPR002290 | |
Pfam | PF00069 | |
PRINTS | PR01773 | |
SMART | SM00220 | |
SUPFAM | SSF56112 | |
PROSITE | PS01351 PS00107 PS50011 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0004707 |
MAP kinase activity |
ECO:0000314 |
F |
figure 3 |
complete | |||||
GO:0018105 |
peptidyl-serine phosphorylation |
ECO:0000314 |
P |
Figure 3 |
complete | |||||
involved_in |
GO:0002225 |
positive regulation of antimicrobial peptide production |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
happens_during:(GO:0050832) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1901244 |
positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
happens_during:(GO:0050832) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1900150 |
regulation of defense response to fungus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0035095 |
behavioral response to nicotine |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050829 |
defense response to Gram-negative bacterium |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050829 |
defense response to Gram-negative bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050830 |
defense response to Gram-positive bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1900426 |
positive regulation of defense response to bacterium |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
happens_during:(WBls:0000109) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008340 |
determination of adult lifespan |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050832 |
defense response to fungus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
part_of:(GO:0045087) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0093002 |
response to nematicide |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_input:(UniProtKB:R4I3J1)|has_input:(UniProtKB:S5VRK7) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1901215 |
negative regulation of neuron death |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
part_of:(GO:0033554) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000165 |
MAPK cascade |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
WB:WBGene00004758 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0018105 |
peptidyl-serine phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004707 |
MAP kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050829 |
defense response to Gram-negative bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
WB:WBVar00088252 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050829 |
defense response to Gram-negative bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
WB:WBVar00088252 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050830 |
defense response to Gram-positive bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
WB:WBVar00088252 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1902097 |
positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(WB:WBGene00003999) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1900182 |
positive regulation of protein localization to nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0050829 |
defense response to Gram-negative bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050829 |
defense response to Gram-negative bacterium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
WB:WBVar00088252 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
WB:WBVar00088252 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045087 |
innate immune response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045087 |
innate immune response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
WB:WBVar00088252 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0038066 |
p38MAPK cascade |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0038066 |
p38MAPK cascade |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
part_of:(GO:0000302)|part_of:(GO:0000303) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0018105 |
peptidyl-serine phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_direct_input:(UniProtKB:P34707) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0012501 |
programmed cell death |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
WB:WBGene00000223 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006972 |
hyperosmotic response |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
SGD:S000004103 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(UniProtKB:P34707) |
Seeded From UniProt |
complete | ||
enables |
GO:0004672 |
protein kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004672 |
protein kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_input:(WB:WBGene00000223) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000303 |
response to superoxide |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000302 |
response to reactive oxygen species |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045087 |
innate immune response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
part_of:(GO:0050832) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035556 |
intracellular signal transduction |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006970 |
response to osmotic stress |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004707 |
MAP kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071310 |
cellular response to organic substance |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001172432 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035556 |
intracellular signal transduction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:106908 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1346861 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0052703 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003256 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004707 |
MAP kinase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0015765 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004707 |
MAP kinase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
CGD:CAL0000183747 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004672 |
protein kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004707 |
MAP kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000719 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004707 |
MAP kinase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016310 |
phosphorylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016301 |
kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Inoue, H et al. (2005) The C. elegans p38 MAPK pathway regulates nuclear localization of the transcription factor SKN-1 in oxidative stress response. Genes Dev. 19 2278-83 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Labed, SA et al. (2012) The pseudokinase NIPI-4 is a novel regulator of antimicrobial peptide gene expression. PLoS ONE 7 e33887 PubMed GONUTS page
- ↑ Matsunaga, Y et al. (2015) Twitchin kinase interacts with MAPKAP kinase 2 in Caenorhabditis elegans striated muscle. Mol. Biol. Cell 26 2096-111 PubMed GONUTS page
- ↑ 4.0 4.1 Pellegrino, MW et al. (2014) Mitochondrial UPR-regulated innate immunity provides resistance to pathogen infection. Nature 516 414-7 PubMed GONUTS page
- ↑ Kong, C et al. (2014) Orthosiphon stamineus protects Caenorhabditis elegans against Staphylococcus aureus infection through immunomodulation. Biol Open 3 644-55 PubMed GONUTS page
- ↑ Twumasi-Boateng, K et al. (2012) An age-dependent reversal in the protective capacities of JNK signaling shortens Caenorhabditis elegans lifespan. Aging Cell 11 659-67 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 Pujol, N et al. (2008) Distinct innate immune responses to infection and wounding in the C. elegans epidermis. Curr. Biol. 18 481-9 PubMed GONUTS page
- ↑ Huffman, DL et al. (2004) Mitogen-activated protein kinase pathways defend against bacterial pore-forming toxins. Proc. Natl. Acad. Sci. U.S.A. 101 10995-1000 PubMed GONUTS page
- ↑ Yuan, Y et al. (2011) Dysregulated LRRK2 signaling in response to endoplasmic reticulum stress leads to dopaminergic neuron degeneration in C. elegans. PLoS ONE 6 e22354 PubMed GONUTS page
- ↑ Tanaka-Hino, M et al. (2002) SEK-1 MAPKK mediates Ca2+ signaling to determine neuronal asymmetric development in Caenorhabditis elegans. EMBO Rep. 3 56-62 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 Tenor, JL & Aballay, A (2008) A conserved Toll-like receptor is required for Caenorhabditis elegans innate immunity. EMBO Rep. 9 103-9 PubMed GONUTS page
- ↑ Kurz, CL et al. (2007) Caenorhabditis elegans pgp-5 is involved in resistance to bacterial infection and heavy metal and its regulation requires TIR-1 and a p38 map kinase cascade. Biochem. Biophys. Res. Commun. 363 438-43 PubMed GONUTS page
- ↑ 13.0 13.1 Kim, DH et al. (2002) A conserved p38 MAP kinase pathway in Caenorhabditis elegans innate immunity. Science 297 623-6 PubMed GONUTS page
- ↑ 14.0 14.1 14.2 Anyanful, A et al. (2009) Conditioning protects C. elegans from lethal effects of enteropathogenic E. coli by activating genes that regulate lifespan and innate immunity. Cell Host Microbe 5 450-62 PubMed GONUTS page
- ↑ 15.0 15.1 Aballay, A et al. (2003) Caenorhabditis elegans innate immune response triggered by Salmonella enterica requires intact LPS and is mediated by a MAPK signaling pathway. Curr. Biol. 13 47-52 PubMed GONUTS page
- ↑ 16.0 16.1 16.2 Shivers, RP et al. (2010) Phosphorylation of the conserved transcription factor ATF-7 by PMK-1 p38 MAPK regulates innate immunity in Caenorhabditis elegans. PLoS Genet. 6 e1000892 PubMed GONUTS page
- ↑ Kawasaki, M et al. (1999) A Caenorhabditis elegans JNK signal transduction pathway regulates coordinated movement via type-D GABAergic motor neurons. EMBO J. 18 3604-15 PubMed GONUTS page
- ↑ 18.0 18.1 18.2 18.3 18.4 Berman, K et al. (2001) Isolation and characterization of pmk-(1-3): three p38 homologs in Caenorhabditis elegans. Mol. Cell Biol. Res. Commun. 4 337-44 PubMed GONUTS page
- ↑ 19.0 19.1 Bolz, DD et al. (2010) A conserved PMK-1/p38 MAPK is required in caenorhabditis elegans tissue-specific immune response to Yersinia pestis infection. J. Biol. Chem. 285 10832-40 PubMed GONUTS page
- ↑ 20.0 20.1 20.2 20.3 20.4 20.5 20.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
c
d
o
- GO:0071310 ! obsolete cellular response to organic substance
- GO:1901215 ! obsolete negative regulation of neuron death
- GO:1902097 ! obsolete positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium
- GO:1901244 ! obsolete positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus
p
- GO:0038066 ! p38MAPK cascade
- Peloderinae
- GO:0018105 ! peptidyl-serine phosphorylation
- GO:0016310 ! phosphorylation
- GO:1900426 ! positive regulation of defense response to bacterium
- GO:0002225 ! positive regulation of antimicrobial peptide production
- GO:1900182 ! positive regulation of protein localization to nucleus
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0012501 ! programmed cell death
- GO:0004672 ! protein kinase activity
- GO:0006468 ! protein phosphorylation
- GO:0004674 ! protein serine/threonine kinase activity
r