User:Vawaiyaki

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
unacceptable	MOUSE:FOXA2	2016-04-11 10:50:23 CDT	GO:0060303 regulation of nucleosome density (P)	PMID:27058788	ECO:0000315 mutant phenotype evidence used in manual assertion	In figure 5 b, there is decreased low Mnase-seq signal when FoxA2 is deleted. This effect is significant for the FoxA2 strong promoters only whereas it is marginal for the FoxA2 weak promoters.	challenge
unacceptable	ECOLI:PTGCB	2016-04-19 01:49:41 CDT	GO:0019664 mixed acid fermentation (P)	PMID:11133439	ECO:0000314 direct assay evidence used in manual assertion	Table 5 displays that in all cases the inactivation of ptsG gene resulted in a shift in fermentation toward succinate.	challenge
unacceptable	HUMAN:COX5A	2016-04-19 05:39:43 CDT	GO:2000378 negative regulation of reactive oxygen species metabolic process (P)	PMID:20660724	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 3a displays how the knock down of Cox5a led to accumulation of reactive oxygen species in H4 cells.	challenge
unacceptable	HUMAN:COX5A	2016-04-19 05:57:13 CDT	GO:0010507 negative regulation of autophagy (P)	PMID:20660724	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 3b displays how the knock down of Cox5a resulted in the induction of autophagy in cells transfected with siRNAs against Cox5a or controls. The autophagy levels were then tested with antibodies against p62m Atg5 (Atg12-Atg5 complex) and LC3.	challenge

acceptable:0
unacceptable:4
requires_changes:0
flagged:0

Annotations challenged by Vawaiyaki

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history

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