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User:Syedsa

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Phage Hunters Spring 2017

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
flagged9CAUD:B6SBV82017-04-29 17:09:16 CDTGO:0008745 N-acetylmuramoyl-L-alanine amidase activity (F)PMID:21803993ECO:0000315 mutant phenotype evidence used in manual assertion

Figures 1a, 1b, and 1c show how the lytic activity and specificity were effected by truncation. Figure 1a goes in depth on how the N- and C-terminal truncations of endolysin CD27L were produced as His-tagged proteins. Figure 1b displays the CD27L (1–179) and the full CD27L both failed to lyse C. tyrobutyricum. Figure 1c gives the assays of 10 the μg Ni-NTA-purified buffer incubated cells.

challenge
flaggedBPPHX:A3FJT02017-04-29 23:35:38 CDTGO:0004857 enzyme inhibitor activity (F)PMID:28446197ECO:0000314 direct assay evidence used in manual assertion

Table 3 shows the activity levels of B. licheniformis. The activity percentages show how growth is inhibited by 0.5 µM of the E protein when compared to the normal growth of B. licheniformis after 6 hours. The table shows PduP-E from Ec3087 having the greatest inhibition after induction of 0.1 mM Rha.

challenge

acceptable:0
unacceptable:0
requires_changes:0
flagged:2

Annotations challenged by Syedsa

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
acceptablePuglisk1,
Team Blue-B
BPPH2:NPGO:0017053 - transcription repressor complex (C)PMID:12426390ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 2
requireschangesStuitjj,
Team X-wing@Alliciousness
BPPH2:CAPSDGO:0019012 - virion (C)PMID:15837419ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2
requireschangesKhellfa,
Team The Lysogenizers
BPB03:HOLINGO:0044659 - viral release from host cell by cytolysis (P)GO_REF:0000100ECO:0000247 sequence alignment evidence used in manual assertionchallengeC: 1
acceptableMcgillje,
Team Phergalicious
BPSPP:O48472GO:0020002 - host cell plasma membrane (C)PMID:27825035ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2

0 annotations fixed by Syedsa

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