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RAT:CALR

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Species (Taxon ID) Rattus norvegicus (Rat). (10116)
Gene Name(s) Calr
Protein Name(s) Calreticulin

CALBP CRP55 Calcium-binding protein 3 CABP3 Calregulin Endoplasmic reticulum resident protein 60 ERp60 HACBP

External Links
UniProt P18418
EMBL X53363
D78308
X79327
BC062395
X13702
PIR JH0819
RefSeq NP_071794.1
UniGene Rn.974
PDB 1HHN
1K91
1K9C
PDBsum 1HHN
1K91
1K9C
ProteinModelPortal P18418
SMR P18418
BioGrid 249008
IntAct P18418
MINT MINT-245423
World-2DPAGE 0004:P18418
PaxDb P18418
PRIDE P18418
Ensembl ENSRNOT00000004091
GeneID 64202
KEGG rno:64202
CTD 811
RGD 620288
eggNOG NOG305105
GeneTree ENSGT00430000030841
HOGENOM HOG000192435
HOVERGEN HBG005407
InParanoid P18418
KO K08057
OMA DDFSNKG
OrthoDB EOG77126Z
PhylomeDB P18418
TreeFam TF338438
Reactome REACT_100458
REACT_196415
REACT_198733
REACT_198755
EvolutionaryTrace P18418
NextBio 612898
PRO PR:P18418
Proteomes UP000002494
Genevestigator P18418
GO GO:0001669
GO:0009986
GO:0005737
GO:0005829
GO:0005783
GO:0009897
GO:0031012
GO:0005615
GO:0070062
GO:0005794
GO:0043231
GO:0042824
GO:0005634
GO:0048471
GO:0005844
GO:0043234
GO:0016529
GO:0033018
GO:0005790
GO:0005509
GO:0030246
GO:0001948
GO:0042562
GO:0005506
GO:0003729
GO:0042277
GO:0051082
GO:0055007
GO:0007050
GO:0071285
GO:0071310
GO:0090398
GO:0061077
GO:0030866
GO:0033144
GO:0045665
GO:0048387
GO:0000122
GO:0017148
GO:0002502
GO:0045787
GO:0008284
GO:2000510
GO:0045740
GO:0010628
GO:0050766
GO:1900026
GO:0006611
GO:0006457
GO:0034504
GO:0050821
GO:0040020
GO:0042493
GO:0032355
GO:0010033
GO:0033574
GO:0007283
Gene3D 2.60.120.200
InterPro IPR001580
IPR018124
IPR009169
IPR009033
IPR013320
PANTHER PTHR11073
Pfam PF00262
PIRSF PIRSF002356
PRINTS PR00626
SUPFAM SSF49899
SSF63887
PROSITE PS00803
PS00804
PS00805
PS00014

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0003729

mRNA binding

PMID:14726956[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0050821

protein stabilization

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P14211

P

Seeded From UniProt

complete

part_of

GO:0005790

smooth endoplasmic reticulum

PMID:22665516[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0071310

cellular response to organic substance

PMID:10833321[3]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071285

cellular response to lithium ion

PMID:16236328[4]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:12782144[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0055007

cardiac muscle cell differentiation

PMID:9011638[6]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

PMID:8600158[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0043231

intracellular membrane-bounded organelle

PMID:11452518[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0042562

hormone binding

PMID:12603316[9]

ECO:0000353

physical interaction evidence used in manual assertion

CHEBI:16796

F

Seeded From UniProt

complete

involved_in

GO:0042493

response to drug

PMID:11032977[10]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0042277

peptide binding

PMID:10833321[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0033574

response to testosterone

PMID:9751517[11]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:12401114[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0032355

response to estradiol

PMID:16339744[13]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0016529

sarcoplasmic reticulum

PMID:8600158[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0010033

response to organic substance

PMID:11452518[8]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

PMID:11891802[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0007283

spermatogenesis

PMID:8453984[15]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

PMID:8453984[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

PMID:8841889[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:11891802[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:12603316[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:12782144[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

PMID:8500729[17]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0005506

iron ion binding

PMID:8500729[17]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0001669

acrosomal vesicle

PMID:8453984[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

PMID:18385140[18]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:1901224

positive regulation of NIK/NF-kappaB signaling

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

involved_in

GO:0090398

cellular senescence

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

involved_in

GO:0050821

protein stabilization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

involved_in

GO:0050766

positive regulation of phagocytosis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

involved_in

GO:0045787

positive regulation of cell cycle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

part_of

GO:0044322

endoplasmic reticulum quality control compartment

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

C

Seeded From UniProt

complete

part_of

GO:0042824

MHC class I peptide loading complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

C

Seeded From UniProt

complete

involved_in

GO:0040020

regulation of meiotic nuclear division

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

involved_in

GO:0034504

protein localization to nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

involved_in

GO:0030866

cortical actin cytoskeleton organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

enables

GO:0030246

carbohydrate binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

F

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

part_of

GO:0009897

external side of plasma membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

C

Seeded From UniProt

complete

part_of

GO:0005788

endoplasmic reticulum lumen

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

C

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

F

Seeded From UniProt

complete

involved_in

GO:0002502

peptide antigen assembly with MHC class I protein complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14211
ensembl:ENSMUSP00000003912

P

Seeded From UniProt

complete

involved_in

GO:2000510

positive regulation of dendritic cell chemotaxis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:1901164

negative regulation of trophoblast cell migration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:1900026

positive regulation of substrate adhesion-dependent cell spreading

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0090398

cellular senescence

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0071157

negative regulation of cell cycle arrest

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

enables

GO:0050681

androgen receptor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

F

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

involved_in

GO:0048387

negative regulation of retinoic acid receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0045787

positive regulation of cell cycle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0045665

negative regulation of neuron differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0034504

protein localization to nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0033144

negative regulation of intracellular steroid hormone receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

enables

GO:0031625

ubiquitin protein ligase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

F

Seeded From UniProt

complete

involved_in

GO:0017148

negative regulation of translation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

involved_in

GO:0010595

positive regulation of endothelial cell migration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0008284

positive regulation of cell population proliferation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

involved_in

GO:0006611

protein export from nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

part_of

GO:0005844

polysome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

part_of

GO:0005788

endoplasmic reticulum lumen

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

part_of

GO:0005635

nuclear envelope

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

C

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

F

Seeded From UniProt

complete

enables

GO:0005178

integrin binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

F

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P27797
ensembl:ENSP00000320866

P

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001580
InterPro:IPR009033
InterPro:IPR009169
InterPro:IPR018124

F

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001580
InterPro:IPR009169

C

Seeded From UniProt

complete

involved_in

GO:0006457

protein folding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001580
InterPro:IPR009169

P

Seeded From UniProt

complete

enables

GO:0051082

unfolded protein binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001580
InterPro:IPR009169

F

Seeded From UniProt

complete

involved_in

GO:0006457

protein folding

PMID:12270713[19]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

PMID:12270713[19]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0256

C

Seeded From UniProt

complete

part_of

GO:0016529

sarcoplasmic reticulum

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0703

C

Seeded From UniProt

complete

enables

GO:0030246

carbohydrate binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0430

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0033018

sarcoplasmic reticulum lumen

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0240

C

Seeded From UniProt

complete

part_of

GO:0005788

endoplasmic reticulum lumen

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0096

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Iakova, P et al. (2004) Competition of CUGBP1 and calreticulin for the regulation of p21 translation determines cell fate. EMBO J. 23 406-17 PubMed GONUTS page
  2. Jansen, G et al. (2012) An interaction map of endoplasmic reticulum chaperones and foldases. Mol. Cell Proteomics 11 710-23 PubMed GONUTS page
  3. 3.0 3.1 Cunningham, TJ et al. (2000) Calreticulin binding and other biological activities of survival peptide Y-P30 including effects of systemic treatment of rats. Exp. Neurol. 163 457-68 PubMed GONUTS page
  4. Shao, L et al. (2006) Mood stabilizing drug lithium increases expression of endoplasmic reticulum stress proteins in primary cultured rat cerebral cortical cells. Life Sci. 78 1317-23 PubMed GONUTS page
  5. 5.0 5.1 Somogyi, E et al. (2003) Calreticulin--an endoplasmic reticulum protein with calcium-binding activity is also found in the extracellular matrix. Matrix Biol. 22 179-91 PubMed GONUTS page
  6. Imanaka-Yoshida, K et al. (1996) Alterations of expression and distribution of the Ca(2+)-storing proteins in endo/sarcoplasmic reticulum during differentiation of rat cardiomyocytes. J. Mol. Cell. Cardiol. 28 553-62 PubMed GONUTS page
  7. 7.0 7.1 Tharin, S et al. (1996) Regulation of calcium binding proteins calreticulin and calsequestrin during differentiation in the myogenic cell line L6. J. Cell. Physiol. 166 547-60 PubMed GONUTS page
  8. 8.0 8.1 Yoshioka, Y et al. (2001) [Suppression of stress proteins, GRP78, GRP94, calreticulin and calnexin in liver endoplasmic reticulum of rat treated with a highly toxic coplanar PCB]. Fukuoka Igaku Zasshi 92 201-16 PubMed GONUTS page
  9. 9.0 9.1 Macías, M et al. (2003) Calreticulin-melatonin. An unexpected relationship. Eur. J. Biochem. 270 832-40 PubMed GONUTS page
  10. Chen, B et al. (2000) Chronic valproate treatment increases expression of endoplasmic reticulum stress proteins in the rat cerebral cortex and hippocampus. Biol. Psychiatry 48 658-64 PubMed GONUTS page
  11. Zhu, N et al. (1998) Calreticulin: an intracellular Ca++-binding protein abundantly expressed and regulated by androgen in prostatic epithelial cells. Endocrinology 139 4337-44 PubMed GONUTS page
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